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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0138
         (737 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_30799| Best HMM Match : No HMM Matches (HMM E-Value=.)              59   3e-09
SB_53001| Best HMM Match : No HMM Matches (HMM E-Value=.)              53   3e-07
SB_32812| Best HMM Match : CfAFP (HMM E-Value=9.5)                     43   2e-04
SB_11908| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_40229| Best HMM Match : No HMM Matches (HMM E-Value=.)              38   0.011
SB_42131| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-35)                 36   0.034
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.74 
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.97 
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)                     29   3.0  
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)                     29   3.0  
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)                     29   3.0  
SB_55897| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37)                 28   9.1  
SB_50942| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)                   28   9.1  
SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_27207| Best HMM Match : eIF-5a (HMM E-Value=3.1e-15)                28   9.1  
SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)                    28   9.1  
SB_3581| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   9.1  
SB_51109| Best HMM Match : ATP-cone (HMM E-Value=0.76)                 28   9.1  
SB_46036| Best HMM Match : PSRT (HMM E-Value=1)                        28   9.1  
SB_39271| Best HMM Match : Secretin_N (HMM E-Value=2.4)                28   9.1  
SB_36990| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_35785| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_31551| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37)                 28   9.1  
SB_27585| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)                   28   9.1  
SB_14634| Best HMM Match : ATP-synt_E (HMM E-Value=2.6)                28   9.1  
SB_12900| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.1  
SB_9508| Best HMM Match : Secretin_N (HMM E-Value=1.8)                 28   9.1  

>SB_30799| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
 Frame = -3

Query: 636 LPPNRVSNETMKVVVFQRR-SRETISHLCYTSHXSLQCQTRVKLTGSSFPADSPKPVPLA 460
           LP +R+S +T++VVVF RR +  T S    + H   + +     TGSSFPAD  KPVPLA
Sbjct: 67  LPLHRISKKTIRVVVFHRRIATPTYSTPLMSFH---RVRLESSSTGSSFPADCAKPVPLA 123

Query: 459 VVSLDSR 439
           VVSLDSR
Sbjct: 124 VVSLDSR 130


>SB_53001| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 145

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 22/27 (81%), Positives = 23/27 (85%)
 Frame = +3

Query: 378 MPRHLISDAHEWINEIPTVPIYYLAKP 458
           MPRHLISDAHEWINEIPTVPI    +P
Sbjct: 1   MPRHLISDAHEWINEIPTVPIIEFLQP 27


>SB_32812| Best HMM Match : CfAFP (HMM E-Value=9.5)
          Length = 167

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 19/21 (90%), Positives = 19/21 (90%)
 Frame = +1

Query: 301 LNVNVKKFKQARVNGGSNYDS 363
           LNV VKKF QARVNGGSNYDS
Sbjct: 30  LNVKVKKFNQARVNGGSNYDS 50


>SB_11908| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 95

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +1

Query: 301 LNVNVKKFKQARVNGGSNYDS 363
           LNV VKKF QARVNG SNYDS
Sbjct: 3   LNVKVKKFNQARVNGWSNYDS 23


>SB_40229| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 144

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 17/24 (70%), Positives = 18/24 (75%)
 Frame = +1

Query: 292 PSXLNVNVKKFKQARVNGGSNYDS 363
           PS LNV VKKF QARVNGG   +S
Sbjct: 31  PSALNVKVKKFNQARVNGGDPLES 54


>SB_42131| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-35)
          Length = 521

 Score = 35.9 bits (79), Expect = 0.034
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = -1

Query: 263 RAIQCFVLIRQSDSPCPCQF 204
           R  QCFVLI+QSDSP  CQF
Sbjct: 63  RPSQCFVLIKQSDSPSHCQF 82



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -2

Query: 307 HSXHWAEITLRQHPRGPS 254
           ++ HWAEITLRQH   PS
Sbjct: 48  NNEHWAEITLRQHRFRPS 65


>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1199

 Score = 31.5 bits (68), Expect = 0.74
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -2

Query: 199  LTVERRSYRIVPIAHETKPTRPYG*EDPRKA-GERGSGSSPKRKT 68
            L+V  R Y++VP++HE          + R A   +GSGSSP R T
Sbjct: 1038 LSVSGRCYKVVPLSHELCLVSKSLWNNRRSADNPKGSGSSPTRDT 1082


>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3293

 Score = 31.1 bits (67), Expect = 0.97
 Identities = 25/87 (28%), Positives = 37/87 (42%)
 Frame = -3

Query: 681  GTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRETISHLCYTSHXSLQCQTRVKLTG 502
            G +H AP  IID  P   +++   T KV V++  ++ T  H    S  S Q  +  + T 
Sbjct: 747  GFEHNAPQPIIDEGP-DTSQLRPRTSKVAVWE-TAQATTQHSESVSETSPQLSSTAQQTP 804

Query: 501  SSFPADSPKPVPLAVVSLDSR*GQWES 421
               PA        +  SL +R   W S
Sbjct: 805  PHSPATRHNARTSSPQSLATRHNAWTS 831


>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 446

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
 Frame = +1

Query: 58  SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
           ++ SSY  +WI   V     D+P R + +S +F   S     TA+Q   +    Q  +  
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNS-----TAIQELFKRISEQFTAMF 389

Query: 235 LIKT-KHWMALAGVDAM*FLPSXLNVN--VKKFKQ 330
             K   HW    G+D M F  +  N+N  V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424


>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 391

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
 Frame = +1

Query: 58  SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
           ++ SSY  +WI   V     D+P R + +S +F   S     TA+Q   +    Q  +  
Sbjct: 280 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNS-----TAIQELFKRISEQFTAMF 334

Query: 235 LIKT-KHWMALAGVDAM*FLPSXLNVN--VKKFKQ 330
             K   HW    G+D M F  +  N+N  V +++Q
Sbjct: 335 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 369


>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
          Length = 446

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
 Frame = +1

Query: 58  SRKSSYVSDWIRTRVLRPSADLPSRKV-VSVSFRARSARFCTTAVQRSAQNWHGQGESDC 234
           ++ SSY  +WI   V     D+P R + +S +F   S     TA+Q   +    Q  +  
Sbjct: 335 NKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNS-----TAIQELFKRISEQFTAMF 389

Query: 235 LIKT-KHWMALAGVDAM*FLPSXLNVN--VKKFKQ 330
             K   HW    G+D M F  +  N+N  V +++Q
Sbjct: 390 RRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424


>SB_55897| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37)
          Length = 732

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 374 VFGRDFDIITDHKPLLSLFH 393


>SB_50942| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 638

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 681 GTKHRAPADIIDRAPLPPNRV 619
           GT HR PA+   R  +P NRV
Sbjct: 519 GTHHRVPAEATGRVDVPDNRV 539


>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
          Length = 3037

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -3

Query: 663  PADIIDRAPLPPNRVSNETMKVVVFQRRSRETI 565
            PA + +++PLP N  ++E  +++  QRR  E +
Sbjct: 2409 PAKLPNQSPLPNNASASEIQRILENQRREEELL 2441


>SB_37011| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1829

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555  ISGRSFRAIVAEKPLLSLFH 614
            + GR F  I   KPLLSLFH
Sbjct: 1317 VFGRDFDIITDHKPLLSLFH 1336


>SB_27207| Best HMM Match : eIF-5a (HMM E-Value=3.1e-15)
          Length = 710

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 79  VFGRDFDIITDHKPLLSLFH 98


>SB_6030| Best HMM Match : rve (HMM E-Value=8.7e-30)
          Length = 1280

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 608 VFGRDFDIITDHKPLLSLFH 627


>SB_3581| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 523

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 18/75 (24%), Positives = 30/75 (40%)
 Frame = +1

Query: 160 RSARFCTTAVQRSAQNWHGQGESDCLIKTKHWMALAGVDAM*FLPSXLNVNVKKFKQARV 339
           R    C +A + S  N   +   DC + TK+     G + M   P+ +    K   +  +
Sbjct: 232 RRFNLCRSATKSSYVNLDSRTNEDCQVHTKYICKDTGAELM---PTDIKFYQKFGGEKSI 288

Query: 340 NGGSNYDSXKVAKCL 384
            G +   S  + KCL
Sbjct: 289 TGSTTLFSALLTKCL 303


>SB_51109| Best HMM Match : ATP-cone (HMM E-Value=0.76)
          Length = 250

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 681 GTKHRAPADIIDRAPLPPNRV 619
           GT HR PA+   R  +P NRV
Sbjct: 225 GTHHRVPAEATGRVDVPDNRV 245


>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
          Length = 878

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -1

Query: 737 RGSFKRRRAFPPRHHSARLERNTVRPPILSTAHR 636
           RG  +     PPR    R E N+V PP  S   R
Sbjct: 294 RGKREENSVSPPRRSKGRREENSVSPPRRSKGRR 327


>SB_39271| Best HMM Match : Secretin_N (HMM E-Value=2.4)
          Length = 300

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 259 VFGRDFDIITDHKPLLSLFH 278


>SB_36990| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 254

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 176 QNRADRARNETDTTLRLGRSAEGRRTRVR 90
           +NRA RA  +    L+  R  EGRRTR R
Sbjct: 52  ENRALRAHRKCGIILQAFRKFEGRRTRTR 80


>SB_35785| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1089

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 568 VFGRDFDIITDHKPLLSLFH 587


>SB_31551| Best HMM Match : RVT_1 (HMM E-Value=5.3e-37)
          Length = 429

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 347 VFGRDFDIITDHKPLLSLFH 366


>SB_27585| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 226

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 167 VFGRDFDIITDHKPLLSLFH 186


>SB_18117| Best HMM Match : rve (HMM E-Value=1.7e-29)
          Length = 1544

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 773 VFGRDFDIITDHKPLLSLFH 792


>SB_14634| Best HMM Match : ATP-synt_E (HMM E-Value=2.6)
          Length = 309

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 167 VFGRDFDIITDHKPLLSLFH 186


>SB_12900| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 883

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 608 VFGRDFDIITDHKPLLSLFH 627


>SB_9508| Best HMM Match : Secretin_N (HMM E-Value=1.8)
          Length = 391

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +3

Query: 555 ISGRSFRAIVAEKPLLSLFH 614
           + GR F  I   KPLLSLFH
Sbjct: 241 VFGRDFDIITDHKPLLSLFH 260


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,978,254
Number of Sequences: 59808
Number of extensions: 476311
Number of successful extensions: 1121
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1115
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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