Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20013
(505 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22310| Best HMM Match : Exo_endo_phos (HMM E-Value=0.12) 35 0.044
SB_20934| Best HMM Match : PSI_8 (HMM E-Value=4.8) 34 0.058
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.94
SB_34129| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=4.7) 30 0.94
SB_20258| Best HMM Match : Exo_endo_phos (HMM E-Value=7.1e-16) 30 0.94
SB_48818| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00029) 30 0.94
SB_42532| Best HMM Match : Exo_endo_phos (HMM E-Value=7.2e-16) 30 0.94
SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.94
SB_20189| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_452| Best HMM Match : RVT_1 (HMM E-Value=9.9e-25) 30 1.2
SB_58610| Best HMM Match : RVT_1 (HMM E-Value=0.061) 30 1.2
SB_46684| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.6
SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09) 29 2.2
SB_31876| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.9
SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_57443| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_51648| Best HMM Match : NAC (HMM E-Value=9.6) 28 3.8
SB_56872| Best HMM Match : RVT_1 (HMM E-Value=2.7e-30) 27 6.6
SB_36078| Best HMM Match : F5_F8_type_C (HMM E-Value=2.1e-27) 27 6.6
SB_34005| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_25574| Best HMM Match : Gp-FAR-1 (HMM E-Value=1.9) 27 6.6
SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_53690| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_52393| Best HMM Match : LEA_4 (HMM E-Value=8) 27 6.6
SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_42535| Best HMM Match : Bac_transf (HMM E-Value=2.7) 27 6.6
SB_27190| Best HMM Match : PAN (HMM E-Value=0.13) 27 6.6
SB_25123| Best HMM Match : LEA_4 (HMM E-Value=8) 27 6.6
SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_7667| Best HMM Match : DUF827 (HMM E-Value=0.33) 27 6.6
SB_5569| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.6
SB_21896| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_8342| Best HMM Match : FKBP_C (HMM E-Value=0) 27 8.8
SB_54688| Best HMM Match : DUF963 (HMM E-Value=0.017) 27 8.8
SB_41523| Best HMM Match : bZIP_1 (HMM E-Value=8.8) 27 8.8
SB_22556| Best HMM Match : FHIPEP (HMM E-Value=6) 27 8.8
>SB_22310| Best HMM Match : Exo_endo_phos (HMM E-Value=0.12)
Length = 633
Score = 34.7 bits (76), Expect = 0.044
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -2
Query: 483 SESVCAEALTKLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
SE + + K IE D+ PLK+ PS W+ + +A +KR+++E ++
Sbjct: 376 SEHLAVHSTKKTLIETFDQHAPLKHSKKTLRPSAQWYHEGIGEAKRKRRKLERRW 430
>SB_20934| Best HMM Match : PSI_8 (HMM E-Value=4.8)
Length = 252
Score = 34.3 bits (75), Expect = 0.058
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = -1
Query: 253 FXKKKADSWKSFCLSISPNVCPSVVWRNIRRFRCAFTETSSGFLPASLNNQFLDRLAPST 74
F + K S + SP+ PSV + R S G P+ + L R +PS
Sbjct: 4 FARPKPPSHRYSLTRYSPSAVPSVFAHPVFTLRPPIGIRSPGIHPSPSHRYSLARYSPSA 63
Query: 73 VPERIIMPLMPLNP-SGLNSP 14
+P P+ L P G+ SP
Sbjct: 64 LPSAFARPVFTLRPLIGIRSP 84
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 229 WKSFCLSISPNVCPSVVWRNIRRFRCAFTE 140
W+ C+S SP S VW+ + RFRC E
Sbjct: 755 WQGNCVSHSPEALFSTVWKVVPRFRCLVEE 784
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 229 WKSFCLSISPNVCPSVVWRNIRRFR 155
W+ C+S SP S VW+ + RFR
Sbjct: 793 WQGNCVSHSPEALFSTVWKVVPRFR 817
>SB_5823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2324
Score = 30.7 bits (66), Expect = 0.71
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 112 LNNQFLDRLAPSTVPE-RIIMPLMPLNPSGLNSPFSM 5
L NQF +L PS PE R P+M PS L++PF+M
Sbjct: 975 LQNQF-QQLFPSASPEPRQPSPMMGFQPSYLSNPFAM 1010
>SB_39061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2362
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 453 KLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKR 340
+LF+EVAD P+K + P PW + + S+++K+R
Sbjct: 1913 QLFLEVADDHAPIKRQRVKGTPI-PWMNNQISESMKER 1949
>SB_34129| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=4.7)
Length = 254
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 453 KLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKR 340
+LF+EVAD P+K + P PW + + S+++K+R
Sbjct: 42 QLFLEVADDHAPIKRQRVKGTPI-PWMNNQISESMKER 78
>SB_20258| Best HMM Match : Exo_endo_phos (HMM E-Value=7.1e-16)
Length = 525
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 453 KLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKR 340
+LF+EVAD P+K + P PW + + S+++K+R
Sbjct: 313 QLFLEVADDHAPIKRQRVKGTPI-PWMNNQISESMKER 349
>SB_48818| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00029)
Length = 318
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 453 KLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKR 340
+LF+EVAD P+K + P PW + + S+++K+R
Sbjct: 253 QLFLEVADDHAPIKRQRVKGTPI-PWMNNQISESMKER 289
>SB_42532| Best HMM Match : Exo_endo_phos (HMM E-Value=7.2e-16)
Length = 399
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 453 KLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKR 340
+LF+EVAD P+K + P PW + + S+++K+R
Sbjct: 313 QLFLEVADDHAPIKRQRVKGTPI-PWMNNQISESMKER 349
>SB_14872| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1182
Score = 30.3 bits (65), Expect = 0.94
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = -2
Query: 453 KLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKR 340
+LF+EVAD P+K + P PW + + S+++K+R
Sbjct: 187 QLFLEVADDHAPIKRQRVKGTPI-PWMNNQISESMKER 223
>SB_20189| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -2
Query: 468 AEALTKLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQYC 316
AE K F++VAD P+ +G P W +AIK R + + C
Sbjct: 84 AEFFNKTFLDVADIFAPVSTKRVGRPQQPQWMSPGIYEAIKHRDALLKKAC 134
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 483 SESV-CAEALTKLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
SE+V + K + D+ PLK + P PW+ +E +A + R++ E ++
Sbjct: 4651 SETVQLVDCYNKTLAGLLDRHAPLKTKTVTVRPQVPWYSEEIREAKRVRRRAERKW 4706
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = -1
Query: 190 PSVVWRNIRRFRCAFTETSSGFLPASLNNQFLDRLAPSTVPERI----IMPLMP 41
PS +W N++R + SG L ++L + DRL+ S + +I + P++P
Sbjct: 201 PSQLWSNVKRIAGINPASGSGDLISTLQVEGFDRLSESDIANKINSAFLEPMLP 254
>SB_452| Best HMM Match : RVT_1 (HMM E-Value=9.9e-25)
Length = 1486
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 483 SESV-CAEALTKLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
SE+V + K + D+ PLK + P PW+ +E +A + R++ E ++
Sbjct: 302 SETVQLVDCYNKTLAGLLDRHAPLKTKTVTVRPQVPWYSEEIREAKRVRRRAERKW 357
>SB_58610| Best HMM Match : RVT_1 (HMM E-Value=0.061)
Length = 1445
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -2
Query: 468 AEALTKLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQYC 316
AE K F++VAD P+ +G P W +AIK R + + C
Sbjct: 83 AEFFNKTFLDVADIFAPVSTKRVGRPQQPQWMSPGIYEAIKHRDALLKKAC 133
>SB_46684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 432 DKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQYCENCTSENFD 289
+K PLK + P PW+ QE A ++R++ E + + NFD
Sbjct: 141 NKHAPLKQRTIVTRPRVPWFTQEIRQAKRERRKAEKIWRRSRMVANFD 188
>SB_44983| Best HMM Match : Death (HMM E-Value=4.8e-09)
Length = 868
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Frame = -2
Query: 504 LPNISHGSESVCAEALTKLFIEVADKT--FPLKNGALG----FIPSPPWWDQECSDAIKK 343
L +S G+ + C L + + DK F L N AL + S D + D K+
Sbjct: 763 LDEVSDGARAQCLSKLGRCSVRCGDKHKGFQLINEALKIRHRYAKSSSMGDDDMGDDEKR 822
Query: 342 RKQVELQYCENCTSEN 295
++V L C N +EN
Sbjct: 823 NREVMLAACYNDFAEN 838
>SB_31876| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 630
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 453 KLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKR 340
+ F+EVAD P+K + P PW + + S+++K+R
Sbjct: 42 QFFLEVADDHAPIKRQRVKGTPI-PWMNNQISESMKER 78
>SB_3604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1319
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -2
Query: 432 DKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQYCENCTSENFD 289
DK PLK + P PW+ +E A ++R++ E + + NFD
Sbjct: 912 DKHAPLKQRTIVTRPRVPWFTEEIRLAKRERRKAEKIWRRSRMVANFD 959
>SB_57443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1007
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 444 IEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
+E+A+K P+K LG PW +E ++KRK++ Y
Sbjct: 913 LEIANKRVPMKK--LGSSSDAPWITREHKRLLRKRKRLYNNY 952
>SB_51648| Best HMM Match : NAC (HMM E-Value=9.6)
Length = 179
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 122 EKTRRSFSKCTPESSNITPYHRRTDIRGNRETKRFPAICFFLXEYK 259
++T R+F K TP T R R N +KR CF + ++
Sbjct: 8 DRTLRAFPKVTPAKEQSTLDLRSYQYRPNSPSKRLKLCCFRISRWR 53
>SB_56872| Best HMM Match : RVT_1 (HMM E-Value=2.7e-30)
Length = 575
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 450 LFIEVADKTFPLKNGALGFIPSP-PWWDQECSDAIKKRKQVELQYCENCTSENFDL 286
LF + +K P K + F + P+ E AIK +++ QY + T EN++L
Sbjct: 64 LFNTIVEKHMPTKK--MRFRKADVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWEL 117
>SB_36078| Best HMM Match : F5_F8_type_C (HMM E-Value=2.1e-27)
Length = 611
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 432 DKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
DK PLK + P W+ E S+ +KR+++E ++
Sbjct: 355 DKHAPLKAKLVTIRPKAAWYTPEVSEEKRKRRRLERKW 392
>SB_34005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 27.5 bits (58), Expect = 6.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 393 IPSPPWWDQECSDAIKKRK 337
IP PWW+Q+C + + K
Sbjct: 357 IPLDPWWEQDCKEMEEDEK 375
>SB_27477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1800
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 450 LFIEVADKTFPLKNGALGFIPSP-PWWDQECSDAIKKRKQVELQYCENCTSENFDL 286
LF + +K P K + F + P+ E AIK +++ QY + T EN++L
Sbjct: 1505 LFNTIVEKHMPTKK--MRFRKADVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWEL 1558
>SB_25574| Best HMM Match : Gp-FAR-1 (HMM E-Value=1.9)
Length = 324
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 450 LFIEVADKTFPLKNGALGFIPSP-PWWDQECSDAIKKRKQVELQYCENCTSENFDL 286
LF + +K P K + F + P+ E AIK +++ QY + T EN++L
Sbjct: 64 LFNTIVEKHMPTKK--MRFRKADVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWEL 117
>SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 432 DKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
DK PLK + P W+ E S+ +KR+++E ++
Sbjct: 2049 DKHAPLKAKLVTIRPKAAWYTPEVSEEKRKRRRLERKW 2086
>SB_53690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 432 DKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
DK PLK + P W+ E S+ +KR+++E ++
Sbjct: 70 DKHAPLKAKLVTIRPKAAWYTPEISEEKRKRRRLERKW 107
>SB_52393| Best HMM Match : LEA_4 (HMM E-Value=8)
Length = 203
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 450 LFIEVADKTFPLKNGALGFIPSP-PWWDQECSDAIKKRKQVELQYCENCTSENFDL 286
LF + +K P K + F + P+ E AIK +++ QY + T EN++L
Sbjct: 102 LFNTIVEKHMPTKK--MRFRKADVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWEL 155
>SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 27.5 bits (58), Expect = 6.6
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 277 ICNQIKIFRCTILTILELNLFSFFNC 354
+C + + FRC IL +EL ++++F C
Sbjct: 373 VCPRKQPFRCQILEKVELAIYAYFVC 398
>SB_43061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 450 LFIEVADKTFPLKNGALGFIPSP-PWWDQECSDAIKKRKQVELQYCENCTSENFDL 286
LF + +K P K + F + P+ E AIK +++ QY + T EN++L
Sbjct: 1136 LFNTIVEKHMPTKK--MRFRKADVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWEL 1189
>SB_42535| Best HMM Match : Bac_transf (HMM E-Value=2.7)
Length = 245
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 432 DKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
DK PLK + P W+ E S+ +KR+++E ++
Sbjct: 126 DKHAPLKAKLVTIRPKAAWYTPEVSEEKRKRRRLERKW 163
>SB_27190| Best HMM Match : PAN (HMM E-Value=0.13)
Length = 709
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 432 DKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
DK PLK + P W+ E S+ +KR+++E ++
Sbjct: 341 DKHAPLKAKLVTIRPKAAWYTPEVSEEKRKRRRLERKW 378
>SB_25123| Best HMM Match : LEA_4 (HMM E-Value=8)
Length = 294
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 450 LFIEVADKTFPLKNGALGFIPSP-PWWDQECSDAIKKRKQVELQYCENCTSENFDL 286
LF + +K P K + F + P+ E AIK +++ QY + T EN++L
Sbjct: 158 LFNTIVEKHMPTKK--MRFRKADVPYMTPEWKQAIKMKRKFAKQYAHSKTEENWEL 211
>SB_22968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1332
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 432 DKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
DK PLK + P W+ E S+ +KR+++E ++
Sbjct: 460 DKHAPLKAKLVTIRPKAAWYTPEVSEKKRKRRRLERKW 497
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 27.5 bits (58), Expect = 6.6
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Frame = -3
Query: 413 KMVLWALFHLHLG---------GIKNVRMQLKKENKLSSNIVRIVHL-KILIWLQMLSRP 264
K+ LW F LH G G++ +R++ + K + V I+HL + R
Sbjct: 169 KLNLWNYFRLHAGYLQTVLIKPGLERIRLEYGDDRKFHNVFVEIIHLNNDTATFKNTQRS 228
Query: 263 LVYIXKEKSR*LEIFLSLYFP 201
+ + E+++ + L L P
Sbjct: 229 FMLVAPEEAQLFRVILPLLNP 249
>SB_7667| Best HMM Match : DUF827 (HMM E-Value=0.33)
Length = 806
Score = 27.5 bits (58), Expect = 6.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -2
Query: 432 DKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
DK PLK + P W+ E S+ +KR+++E ++
Sbjct: 265 DKHAPLKAQIVTIRPKAAWYTPEVSEEKRKRRRLERKW 302
>SB_5569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 901
Score = 27.5 bits (58), Expect = 6.6
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 122 EKTRRSFSKCTPESSNITPYHRRTDIRGNRETKRFPAICFFLXEYKLVALKASVTRSKFS 301
E +++S C + + P R DI+G + P + F E+ VA A++ ++ S
Sbjct: 516 EDCGKAYSTC--DCGSAAPSSRLHDIKGRFGVSQIPKLEVFREEWVGVAFDAAIEQAHPS 573
Query: 302 DV 307
DV
Sbjct: 574 DV 575
>SB_21896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = -1
Query: 190 PSVVWRNIRRFRCAFTETSSGFLPASLNNQFLDRLAPSTVPERI----IMPLMP 41
PS W N++R + SG L ++L + DRL+ S + ++ + P++P
Sbjct: 403 PSQWWSNVKRIAGINPASGSGDLISTLQVEGFDRLSESDIVNKLNSAFLEPMLP 456
>SB_8342| Best HMM Match : FKBP_C (HMM E-Value=0)
Length = 266
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +3
Query: 30 EGFSGIRGIIILSGTVLGASLSRN*LFNEAGRKPEEVSVNAHLNLLILRHTT 185
+G + I+ SG LGA + L E KPE+ + H+ + H T
Sbjct: 2 KGLMNLLAIVAFSGLALGAEEPKGELKIEVVSKPEKCTRKTHVGDTLSMHYT 53
>SB_54688| Best HMM Match : DUF963 (HMM E-Value=0.017)
Length = 319
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 306 TSENFDLVTDAFKATSLYSXRKKQIAGNLF 217
++ NF L T+ + AT+LYS +A NL+
Sbjct: 261 SATNFYLATNLYLATNLYSATNLYLATNLY 290
>SB_41523| Best HMM Match : bZIP_1 (HMM E-Value=8.8)
Length = 257
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 450 LFIEVADKTFPLKNGALGFIPSP-PWWDQECSDAIKKRKQVELQYCENCTSENFDL 286
LF + +K P K + F + P+ E AIK +++ QY + T EN++L
Sbjct: 138 LFNTIVEKHMPTKK--MRFRKADVPYMTPEWKQAIKMKRKFVKQYAHSKTEENWEL 191
>SB_22556| Best HMM Match : FHIPEP (HMM E-Value=6)
Length = 363
Score = 27.1 bits (57), Expect = 8.8
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -2
Query: 483 SESV-CAEALTKLFIEVADKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQY 319
SE+V + K + + PLK + P PW+ +E +A + R++ E ++
Sbjct: 137 SETVQLVDCYNKTLAGLLGRHAPLKTKTVTVRPQVPWYSEEIREAKRVRRRAERKW 192
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,223,392
Number of Sequences: 59808
Number of extensions: 298188
Number of successful extensions: 821
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 820
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1099461690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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