Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30038X
(431 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36968| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.23
SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07) 30 0.71
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.71
SB_25169| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.93
SB_53411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0) 28 2.8
SB_24685| Best HMM Match : 7tm_1 (HMM E-Value=7.4e-06) 28 3.8
SB_45236| Best HMM Match : PRP38 (HMM E-Value=0) 28 3.8
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 27 5.0
SB_1307| Best HMM Match : Filament (HMM E-Value=0.13) 27 5.0
SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24) 27 6.6
SB_6036| Best HMM Match : UBX (HMM E-Value=0.076) 27 6.6
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 27 6.6
SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6) 27 6.6
SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077) 27 8.7
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 27 8.7
SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5) 27 8.7
SB_30139| Best HMM Match : E-MAP-115 (HMM E-Value=0.072) 27 8.7
SB_14306| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037) 27 8.7
SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7) 27 8.7
SB_3324| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
>SB_36968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.9 bits (69), Expect = 0.23
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +1
Query: 208 REIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRL 387
R Q+SSS +T ++S++ +S P R + + K + + S + KR
Sbjct: 38 RNAQSSSSTETSQRSRARKRQSSSSSSTTSSSPERNIKKKSSKAPKRQSSSSSSSSPKRK 97
Query: 388 AQKKKGRRRKG 420
+KK+ R + G
Sbjct: 98 TKKKQHRLKSG 108
>SB_55750| Best HMM Match : PWWP (HMM E-Value=6.4e-07)
Length = 532
Score = 30.3 bits (65), Expect = 0.71
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = +1
Query: 196 RSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEE 375
RSR + N + S + TS NG+ G S +LK S PS +FS A
Sbjct: 82 RSRACTLNNRRGIVNLSPKPRTLRHEKTS-NGSKKGNSLPSQSTSLKSSNPSKKFSHATR 140
Query: 376 E-KRLAQKKKGR 408
+ ++ + K G+
Sbjct: 141 DIDKVVENKNGK 152
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 30.3 bits (65), Expect = 0.71
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +1
Query: 196 RSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEE 375
RSR R+ S K RS R+ +S + S + + S R R + +RSR S+ S +
Sbjct: 647 RSRSRDRGGSRRGKRRS-RSRSSSYSSRSRSRSRSRDRGRGRKRSRRRSRSSSHSSSSLS 705
Query: 376 EKRLAQKKKGRRRK 417
R + +GR R+
Sbjct: 706 RSRSRSRSRGRGRR 719
>SB_25169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 29.9 bits (64), Expect = 0.93
Identities = 16/67 (23%), Positives = 31/67 (46%)
Frame = +1
Query: 217 QNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQK 396
+N S+ K + N+ RNTS N +N+ + + KRS R ++ + R+ Q
Sbjct: 10 ENQSNTKRNTSENRSNTRRNTSENQSNTKRSTSENQSNTKRSTSENRQTQGATQMRIGQT 69
Query: 397 KKGRRRK 417
+ + +
Sbjct: 70 QSATQMR 76
>SB_53411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 280 STNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
+T ++SG + N+ R+ PSAR A +K L ++ KG RR+ +
Sbjct: 220 NTRTSSSGGKATDGKNSSDRTPPSAR-KTASVKKILRKRPKGARRRSQ 266
>SB_22143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 28.3 bits (60), Expect = 2.8
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Frame = +1
Query: 196 RSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRP---SARFSR 366
+S + S+S KT S T ++T ANSGP +R S +P S + +
Sbjct: 1091 KSATKASSKSASSKTESAST------TSATPAANSGPSKRPKSAVQSSKQPAKTSKKKAN 1144
Query: 367 AEEE---KRLAQKKKGRRRKGE 423
EEE +A +K +R K E
Sbjct: 1145 VEEETGPPLIANNEKDKRIKDE 1166
>SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0)
Length = 1035
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/75 (25%), Positives = 30/75 (40%)
Frame = +1
Query: 187 VDRRSRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSRPSARFSR 366
V ++S + +N + T + R R + SS + S+ S F
Sbjct: 858 VKKKSHKNKTRNKIDTDSSDVETGRHVKRKEKKRKEKKRRREKDSSEKTRVSKSSKNFKA 917
Query: 367 AEEEKRLAQKKKGRR 411
AE EK+ +KKK R
Sbjct: 918 AESEKKKRKKKKKYR 932
>SB_24685| Best HMM Match : 7tm_1 (HMM E-Value=7.4e-06)
Length = 311
Score = 27.9 bits (59), Expect = 3.8
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 364 RAEEEKRLAQKKKGRRRKGE 423
R EE++R +K+KGRRRK E
Sbjct: 2 RKEEDERGRRKEKGRRRKDE 21
>SB_45236| Best HMM Match : PRP38 (HMM E-Value=0)
Length = 381
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 271 RNTSTNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
R+ + S RR+ S + R R +R R ++ KR ++++ +RR E
Sbjct: 305 RDRDRKRSRSRDRRKSRSRSRDRRRSRSRERRRDDRKRRSRERSPKRRSRE 355
>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 791
Score = 27.5 bits (58), Expect = 5.0
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 199 SRVREIQNSSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSR-PSARFSRAEE 375
SR R +SSS + S R+ ++ + S + +S R S+++ RSR S SR+
Sbjct: 200 SRSRSSSSSSSGSSHSSRSQSHTPSSGSGSRNSSRSASRSQSHSVSRSRSKSLSQSRSRS 259
Query: 376 EKRLAQKKKGRRR 414
+ A + R R
Sbjct: 260 QSHSASRSVSRSR 272
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.5 bits (58), Expect = 5.0
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRR 414
+R + + LKR R S + R ++ K K+K +R+
Sbjct: 213 KRESAKHRLKRKRESVKHKRKQKRKSAKHKRKHKRK 248
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRR 411
RRR +R R +AR R E +R + K+GRR
Sbjct: 507 RRRNRRKRRRRKRRTARRKRRELRRRRLRMKRGRR 541
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 307 RRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
RRR +R R S R R +R +Q ++ RRRK
Sbjct: 685 RRRKRRRKRRRQRRSRRRRRRRRRRRRSQLRRKRRRK 721
>SB_1307| Best HMM Match : Filament (HMM E-Value=0.13)
Length = 916
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 274 NTSTNGANSGPRRRMSSNALKRSRPSARFS 363
NTS +G +SG S N + RSR ++ S
Sbjct: 652 NTSLSGVSSGSHGNFSGNGIYRSRSTSNLS 681
>SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24)
Length = 298
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 355 RFSRAEEEKRLAQKKKGRRRKGE 423
R RAEEEKR +K++ +R+ E
Sbjct: 105 RLKRAEEEKRREEKRREEKRREE 127
>SB_6036| Best HMM Match : UBX (HMM E-Value=0.076)
Length = 355
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 298 SGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRK 417
SG R R+ L++ S R +E+K+ +K K RR+K
Sbjct: 195 SGQRDRLRMEQLEQYHASLNEDRIKEQKKEEEKVKLRRKK 234
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 27.1 bits (57), Expect = 6.6
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 6/39 (15%)
Frame = +1
Query: 319 SSNALKRSRPSARFSRA------EEEKRLAQKKKGRRRK 417
S A R+ AR SR+ EEEKR+A++KK +R+K
Sbjct: 898 SEKAKLRASAQARNSRSPVEVAIEEEKRVAKRKKEQRKK 936
>SB_2507| Best HMM Match : DUF1168 (HMM E-Value=1.6)
Length = 305
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +1
Query: 280 STNGANSGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKKKGRRRKGE 423
S G++SG S + K+ P + +++++ + KKG++RK +
Sbjct: 208 SNIGSSSGQLEPTSQSDGKKGDPLSDVESTQKKRKKKKSKKGKKRKNQ 255
>SB_55427| Best HMM Match : E-MAP-115 (HMM E-Value=0.077)
Length = 599
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 364 RAEEEKRLAQKKKGRRRKGE 423
R EEE+R ++ + RRRKGE
Sbjct: 381 RKEEEERARREMEARRRKGE 400
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +3
Query: 183 ESRPSIAGEGDPEFIKRQDQKRS--DLDEQLKEYINEWRKQR 302
ESRPSI E +P K+++ K S L E+ +E IN +R ++
Sbjct: 104 ESRPSIFTEQNPHGKKQKENKLSANKLAEKHQEKINLFRHEQ 145
>SB_32977| Best HMM Match : Gp-FAR-1 (HMM E-Value=2.5)
Length = 402
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 207 EGDPEFIKRQDQKRSDLDEQLKEYINEWRKQ 299
E + E + R+++K E+ EY +EW KQ
Sbjct: 1 EREHEMLLREEEKERLQREKEAEYFSEWEKQ 31
>SB_30139| Best HMM Match : E-MAP-115 (HMM E-Value=0.072)
Length = 233
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 364 RAEEEKRLAQKKKGRRRKGE 423
R EEE+R ++ + RRRKGE
Sbjct: 108 RKEEEERARREMEARRRKGE 127
>SB_14306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 963
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Frame = +3
Query: 162 TKPAPKQESRPSIAGEGDPEFIKRQD-QKRSDLD-----EQLKEYINEW 290
++P PK E R + E +PE + + RSDL+ E + E + EW
Sbjct: 810 SEPEPKAEPRQTPESEPEPELVPNTSAEPRSDLECYSEPESVGEPLPEW 858
>SB_5831| Best HMM Match : TolA (HMM E-Value=0.0037)
Length = 703
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
Frame = +1
Query: 313 RMSSNALKRSRPSARFS------RAEEEKRLAQKKKGRRRKGE 423
R++ A K++ ARF R E EKR A++++ RR+ E
Sbjct: 176 RLAEEARKKAEAKARFEQEAERRRREAEKRKAEEEEARRKADE 218
>SB_47219| Best HMM Match : DUF414 (HMM E-Value=1.7)
Length = 704
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 168 PAPKQESRPSIAGEGDPEFIKRQDQKRSDLDEQLKEYINE 287
P S+ + + D EF R+ +KR+D E+ +YI +
Sbjct: 319 PYSVMRSKSDLGADSDFEFAMRRQRKRADSIEEGGQYITK 358
>SB_3324| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 298 SGPRRRMSSNALKRSRPSARFSRAEEEKRLAQKK 399
+GPR S ++ KR +PS R +R E +R +K
Sbjct: 86 TGPRAGDSYSSYKRDKPSLREARREAIRRARYEK 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,941,164
Number of Sequences: 59808
Number of extensions: 155537
Number of successful extensions: 781
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 822495283
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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