Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30024X
(369 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 71 4e-13
SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 66 8e-12
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 3e-10
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 1e-06
SB_54113| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0.11) 39 0.001
SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 35 0.024
SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0) 35 0.024
SB_17998| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.8
>SB_18652| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 725
Score = 70.5 bits (165), Expect = 4e-13
Identities = 31/68 (45%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Frame = -2
Query: 362 AADKKKLEEVASKYHLQVRGTRGEHTEAEG---GVCDISNKRRMGLTE*DAVKQMYDGIA 192
A D + +++ K+H+Q RG GEH+E+ G GV DISNKRR+GL+E V+ MY+G+
Sbjct: 278 AKDHPEFDKICEKFHIQARGIHGEHSESTGEDAGVYDISNKRRLGLSEVQCVQDMYNGVK 337
Query: 191 ELIKIEKS 168
L++IE++
Sbjct: 338 SLLEIERA 345
Score = 66.1 bits (154), Expect = 8e-12
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Frame = -2
Query: 362 AADKKKLEEVASKYHLQVRGTRGEHTEAEG---GVCDISNKRRMGLTE*DAVKQMYDGIA 192
A++ +++ ++H+Q RG GEH+ + G GV DISNKRR+GL+E V+ MY+G+
Sbjct: 657 ASEHPDFQKICDEFHIQARGIHGEHSVSTGEDAGVFDISNKRRLGLSEVQCVQDMYNGVK 716
Query: 191 ELIKIEKS 168
+L++IEK+
Sbjct: 717 KLLEIEKA 724
>SB_50378| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 969
Score = 66.1 bits (154), Expect = 8e-12
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Frame = -2
Query: 341 EEVASKYHLQVRGTRGEH---TEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAELIKIEK 171
+++ ++H+Q RG GEH T A+ GV DISNKRR+GL+E V+ MY+G+ +L++IEK
Sbjct: 125 QKICDEFHIQARGIHGEHSVSTGADAGVFDISNKRRLGLSEVQCVQDMYNGVKKLLEIEK 184
Query: 170 S 168
+
Sbjct: 185 A 185
Score = 66.1 bits (154), Expect = 8e-12
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 3/68 (4%)
Frame = -2
Query: 362 AADKKKLEEVASKYHLQVRGTRGEHTEAEG---GVCDISNKRRMGLTE*DAVKQMYDGIA 192
A++ +++ ++H+Q RG GEH+ + G GV DISNKRR+GL+E V+ MY+G+
Sbjct: 902 ASEHPDFQKICDEFHIQARGIHGEHSVSTGEDAGVFDISNKRRLGLSEVQCVQDMYNGVK 961
Query: 191 ELIKIEKS 168
+L++IEK+
Sbjct: 962 KLLEIEKA 969
Score = 64.9 bits (151), Expect = 2e-11
Identities = 28/61 (45%), Positives = 45/61 (73%), Gaps = 3/61 (4%)
Frame = -2
Query: 341 EEVASKYHLQVRGTRGEH---TEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAELIKIEK 171
+++ ++H+Q RG GEH T A+ GV DISNKRR+GL+E V+ MY+G+ +L++IE+
Sbjct: 557 QKICDEFHIQARGIHGEHSVSTGADAGVFDISNKRRLGLSEVQCVQDMYNGVKKLLEIER 616
Query: 170 S 168
+
Sbjct: 617 A 617
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 60.9 bits (141), Expect = 3e-10
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = -2
Query: 365 VAADKKKLEEVASKYHLQVRGTRGEHTEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAEL 186
++ D+K+L+ + +K LQ RGT G T + GGV DISN R+G +E + V+ M DG+ L
Sbjct: 2594 LSQDEKRLDAILAKLKLQKRGTGGVDTASVGGVYDISNADRIGFSEVELVQGMVDGVGLL 2653
Query: 185 IKIEKSL 165
I++EK L
Sbjct: 2654 IEMEKRL 2660
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 55.6 bits (128), Expect = 1e-08
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = -2
Query: 350 KKLEEVASKYHLQVRGTRGEHTEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAELIKIEK 171
K+L+ + K LQ RGT G T A GG DISN R+G +E + V+++ DG+ LI +EK
Sbjct: 338 KRLDTILDKLRLQKRGTGGVDTAAVGGTFDISNSDRLGYSEVELVQKVIDGVNLLIDMEK 397
Query: 170 SL 165
L
Sbjct: 398 RL 399
>SB_36687| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1115
Score = 49.2 bits (112), Expect = 1e-06
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = -2
Query: 347 KLEEVASKYHLQVRGTRGEHTEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAELIKIEKS 168
+ + + LQ RGT G T + G DISN R+G +E + V+++ DG+ LI+IEK+
Sbjct: 278 RFDSILRTLRLQKRGTGGVDTASTDGTFDISNLDRLGTSEVEQVQKVIDGVKALIEIEKA 337
Query: 167 L 165
L
Sbjct: 338 L 338
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = -2
Query: 347 KLEEVASKYHLQVRGTRGEHTEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAELIKIEKS 168
+ + + K LQ RGT G T + G DISN R+G +E V+++ DG+ L+++EK
Sbjct: 1044 RFDGILEKLRLQKRGTGGVDTASTDGTFDISNLDRIGFSEVQLVQKVIDGVKILVEMEKK 1103
Query: 167 L 165
L
Sbjct: 1104 L 1104
Score = 44.8 bits (101), Expect = 2e-05
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -2
Query: 317 LQVRGTRGEHTEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAELIKIEKSL 165
LQ RGT G T + G DISN R+G +E + V+ + DG+ ++++EK+L
Sbjct: 657 LQKRGTGGVDTASTDGTFDISNADRLGTSEVEQVQTVVDGVKLMVELEKAL 707
>SB_54113| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0.11)
Length = 115
Score = 39.1 bits (87), Expect = 0.001
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = -2
Query: 296 GEHTEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAELIKIEKSL 165
G++T + DISN R+G TE V+++ DG+ LIK+EK L
Sbjct: 58 GDNTPIREDIYDISNADRLGYTEVQLVQKVIDGVNLLIKMEKRL 101
>SB_8314| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 309
Score = 34.7 bits (76), Expect = 0.024
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = -2
Query: 344 LEEVASKYHLQVRGTRGEHTEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAELIKIEKSL 165
++++ + + Q RG+ GEH+E + D+SN RR+G E V M + L + E L
Sbjct: 244 IDKICRERNCQARGSTGEHSEVIDRI-DVSNWRRIGFPEYQLVDDMIQCVNFLAEEEDKL 302
>SB_8138| Best HMM Match : ATP-gua_Ptrans (HMM E-Value=0)
Length = 383
Score = 34.7 bits (76), Expect = 0.024
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = -2
Query: 344 LEEVASKYHLQVRGTRGEHTEAEGGVCDISNKRRMGLTE*DAVKQMYDGIAELIKIEKSL 165
++++ + + Q RG+ GEH+E + D+SN RR+G E V M + L + E L
Sbjct: 318 IDKICRERNCQARGSTGEHSEVIDRI-DVSNWRRIGFPEYQLVDDMIQCVNFLAEEEDKL 376
>SB_17998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1089
Score = 27.1 bits (57), Expect = 4.8
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 112 PASAER*INTQA-ARGGAYRDFSILMSSAMPSYICLTASYSVSPMR-RLLEMSHTPPSAS 285
P + + TQA A GG + I + +PS T S+SP L S PP +
Sbjct: 706 PGTTPTLLITQAPASGGGFVVNGIAQAVVLPSSTATTVQVSLSPRSGSTLATSVIPPGSP 765
Query: 286 VCSP 297
V SP
Sbjct: 766 VRSP 769
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,995,370
Number of Sequences: 59808
Number of extensions: 135403
Number of successful extensions: 306
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 299
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 594991920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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