Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30014X
(538 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 213 8e-56
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 2e-35
SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.) 129 2e-30
SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 9e-30
SB_41091| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 2e-23
SB_40744| Best HMM Match : Myosin_head (HMM E-Value=4.7e-09) 105 3e-23
SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0) 85 6e-23
SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0) 93 2e-19
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 85 3e-17
SB_43126| Best HMM Match : Myosin_head (HMM E-Value=4.1e-32) 83 1e-16
SB_21326| Best HMM Match : Myosin_head (HMM E-Value=5e-05) 77 9e-15
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41) 61 5e-10
SB_30334| Best HMM Match : Myosin_head (HMM E-Value=8.8e-12) 56 2e-08
SB_22979| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34) 50 9e-07
SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_25537| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_1078| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_22206| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-38) 32 0.26
SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06) 32 0.34
SB_399| Best HMM Match : Glycos_transf_2 (HMM E-Value=0.96) 31 0.60
SB_17403| Best HMM Match : I-set (HMM E-Value=0) 29 2.4
SB_43702| Best HMM Match : SERTA (HMM E-Value=0.034) 28 5.6
SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10) 28 5.6
SB_56007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_11569| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 213 bits (520), Expect = 8e-56
Identities = 102/170 (60%), Positives = 122/170 (71%), Gaps = 1/170 (0%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IGVLDIAG EIF +N FEQLCIN TNEKLQQ FNHHM +LEQEEY+REGI W FIDFG D
Sbjct: 454 IGVLDIAGFEIFQFNSFEQLCINVTNEKLQQFFNHHMFILEQEEYKREGIHWEFIDFGHD 513
Query: 185 LQNCIDLI-EKPMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQA 361
L+ I+LI K GI +ILEEE + PKATDQTF++KLNN H GKSA + KPK
Sbjct: 514 LEPTINLIFGKGTGIFAILEEECIVPKATDQTFLQKLNNTHDGKSAKFGKPKISGKKQVN 573
Query: 362 AHFAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQFKKGQNKLLVEIFADH 511
HF I HYAG VGYN+ WL+KNKDP+N+ V F K + + ++ ++
Sbjct: 574 YHFEIHHYAGTVGYNVDNWLDKNKDPINEAVASLFAKSGDPFISHLWKEY 623
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 145 bits (351), Expect = 2e-35
Identities = 87/197 (44%), Positives = 112/197 (56%), Gaps = 29/197 (14%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCI-----------NFTNEKLQQ-----IFNH--------- 109
IG+LDIAG EIF +N FEQ+CI N T L+Q NH
Sbjct: 466 IGILDIAGFEIFQFNSFEQMCINYTNEKLQQLFNHTMFILEQEECLPFCNHPPMVIPIHH 525
Query: 110 ----HMSLLEQEEYQREGIEWTFIDFGMDLQNCIDLIEKPMGILSILEEESMFPKATDQT 277
H+S QEEY++EGI+W FIDFG+DLQ CI+L+EKPMGI ++ +EE FPKATD+T
Sbjct: 526 TLMYHVSDYFQEEYRKEGIDWKFIDFGLDLQPCINLLEKPMGIFALCDEECWFPKATDKT 585
Query: 278 FVEKLNNNHLGKSAPYLKPKPPKPGCQAAHFAIGHYAGYVGYNITGWLEKNKDPLNDTVV 457
VEKL H K + P+ AHF+I HYAG V YN WL KN+DPLND +
Sbjct: 586 LVEKLIKEH-NKHEKFQIPE----FRSQAHFSIIHYAGRVDYNCDNWLMKNQDPLNDNIT 640
Query: 458 DQFKKGQNKLLVEIFAD 508
+ + +V ++ D
Sbjct: 641 SLMQGSSDTFVVALWKD 657
>SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2033
Score = 129 bits (311), Expect = 2e-30
Identities = 77/182 (42%), Positives = 107/182 (58%), Gaps = 16/182 (8%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNH---------------HMSLLEQEEY 139
IG+LDI G E F+ N FEQ CIN NE+LQ FN H+ + EQEEY
Sbjct: 373 IGILDIFGFEHFETNSFEQACINLANEQLQFFFNQCRLLWVMLTICRIEQHIFMWEQEEY 432
Query: 140 QREGIEWTFIDFGMDLQNCIDL-IEKPMGILSILEEESMFPKATDQTFVEKLNNNHLGKS 316
++EGI+WT I F D + +DL + KP+GIL++L+EES FP++TD+TFV+KL N
Sbjct: 433 KKEGIDWTSISF-QDNKPVLDLFLGKPIGILALLDEESHFPQSTDETFVQKLQKNCGDNK 491
Query: 317 APYLKPKPPKPGCQAAHFAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQFKKGQNKLLVE 496
++ + Q F I HYAG V Y+ G+LEKN+D L V++ + N+L+
Sbjct: 492 FFHISGRG-----QIDTFVINHYAGEVEYSSYGFLEKNRDTLPAGVMETLQHSDNELIST 546
Query: 497 IF 502
IF
Sbjct: 547 IF 548
>SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 884
Score = 126 bits (305), Expect = 9e-30
Identities = 68/138 (49%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IGVLDI G E FD N FEQLCIN+ NE LQQ F H+ LEQE+Y +EGI W I F +D
Sbjct: 389 IGVLDIFGFENFDINSFEQLCINYANEHLQQFFVKHIFKLEQEQYDKEGIRWQHISF-VD 447
Query: 185 LQNCIDLI-EKPMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQA 361
Q +DL+ +KPM I++I+ EES FPK TD T ++KL +NH S+ Y+ P
Sbjct: 448 NQMILDLLAQKPMNIVAIVNEESRFPKGTDTTMLQKLQSNH-NDSSLYI----PSKNSFD 502
Query: 362 AHFAIGHYAGYVGYNITG 415
F + H+AG V Y+ G
Sbjct: 503 MSFGVRHFAGTVYYDSRG 520
>SB_41091| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 105 bits (252), Expect = 2e-23
Identities = 56/147 (38%), Positives = 84/147 (57%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IG+LD+ G E F N EQLCIN+ NEKLQQ F + +Q+EYQ+EG++W F +F +D
Sbjct: 454 IGLLDVYGFESFLLNSLEQLCINYANEKLQQHFVLYFLKRQQDEYQKEGVDWDFQEF-VD 512
Query: 185 LQNCIDLIEKPMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQAA 364
+ C+DL+E G+ ++L EE + D + N L + + + + Q+
Sbjct: 513 NRPCLDLLESRSGVFALLNEECRLNRPVDNQGLSDRLNFSLRSNTHFSQLRQRS---QSP 569
Query: 365 HFAIGHYAGYVGYNITGWLEKNKDPLN 445
+F I HYA V Y + G +EKNK L+
Sbjct: 570 NFVIHHYADSVCYEVEGLVEKNKTSLD 596
>SB_40744| Best HMM Match : Myosin_head (HMM E-Value=4.7e-09)
Length = 525
Score = 105 bits (251), Expect = 3e-23
Identities = 51/94 (54%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IGVLDI G E FD N FEQLCIN+ NE LQQ F + EQEEY REGIEW F+ F +D
Sbjct: 69 IGVLDIFGFEKFDMNSFEQLCINYANENLQQFFVAQIFKNEQEEYDREGIEWNFVTF-VD 127
Query: 185 LQNCIDLI-EKPMGILSILEEESMFPKATDQTFV 283
Q +D++ EKPM +++++EES FP+ T + V
Sbjct: 128 NQEVLDMLAEKPMNFIALIDEESRFPQVTQHSKV 161
>SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 621
Score = 85.0 bits (201), Expect(2) = 6e-23
Identities = 40/70 (57%), Positives = 50/70 (71%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IG+LDI G E F+ N FEQ IN+ NEKLQQ FN H+ LEQ EY REG+ W+ ID+ +D
Sbjct: 352 IGILDIFGFENFEVNRFEQFSINYANEKLQQYFNKHIFSLEQHEYNREGLAWSDIDW-VD 410
Query: 185 LQNCIDLIEK 214
C+DLIE+
Sbjct: 411 NGECLDLIER 420
Score = 39.9 bits (89), Expect(2) = 6e-23
Identities = 14/36 (38%), Positives = 27/36 (75%)
Frame = +2
Query: 218 MGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPY 325
+G+L++++EES FPK TD + ++KL+++H P+
Sbjct: 458 LGVLALIDEESRFPKGTDGSMLDKLHSSHQRPEIPH 493
>SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 650
Score = 92.7 bits (220), Expect = 2e-19
Identities = 51/93 (54%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IGVLDI G EIF+ N FEQLCIN+ NEKLQQ+F + EQEEYQREGIEW +++ +
Sbjct: 367 IGVLDIYGFEIFETNSFEQLCINYCNEKLQQLFIELVLKEEQEEYQREGIEWEEVEYFNN 426
Query: 185 LQNCIDLIEKP-MGILSILEEESM-FPKATDQT 277
C DLIE+ GI++I++E + K TDQT
Sbjct: 427 KIIC-DLIEQSHKGIIAIMDEGCLNVGKVTDQT 458
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 85.4 bits (202), Expect = 3e-17
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Frame = +2
Query: 122 LEQEEYQREGIEWTFIDFGMDLQNCIDL-IEKPMGILSILEEESMFPKATDQTFVEKLNN 298
+ ++EY+ EGI I F D + +D+ ++KP+G+L++L+EES FPKATD T VEK NN
Sbjct: 56 MAKDEYREEGIPLHGITFE-DNRPILDMFLQKPIGVLALLDEESRFPKATDFTLVEKFNN 114
Query: 299 NHLGKSAPYLKPKPPKPGCQAAHFAIGHYAGYVGYNITGWLEKNKDPLNDTVV 457
N K Y + K + F I HYAG V YN T +LEKN+D L+ VV
Sbjct: 115 NI--KQHCYERTKETE---NFPSFTIKHYAGRVKYNATNFLEKNRDTLSPDVV 162
>SB_43126| Best HMM Match : Myosin_head (HMM E-Value=4.1e-32)
Length = 898
Score = 83.0 bits (196), Expect = 1e-16
Identities = 44/69 (63%), Positives = 47/69 (68%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMD 184
IGVLDI G EIF NGFEQ CINF NEKLQQIF EQEEY EGI+WT ID+ +
Sbjct: 746 IGVLDIYGFEIFQKNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVEEGIQWTPIDYFNN 805
Query: 185 LQNCIDLIE 211
C DLIE
Sbjct: 806 KIVC-DLIE 813
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +2
Query: 368 FAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQFKKGQNKLLVEIFAD 508
F I HYAG V Y+I G+ E+N+D L +++ + + +F D
Sbjct: 834 FIIHHYAGKVSYDIDGFCERNRDVLFKDLIELMQSSDIPFIRTLFPD 880
>SB_21326| Best HMM Match : Myosin_head (HMM E-Value=5e-05)
Length = 469
Score = 77.0 bits (181), Expect = 9e-15
Identities = 45/163 (27%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREG-IEWTFIDFGM 181
+ V+D+ G E + NG Q+C+N E +Q +N + +E + EG + +D+ +
Sbjct: 106 VSVMDMFGFENCEVNGLNQICVNLCAETIQHFYNTRIFKTTEEYCREEGLLSELDLDY-I 164
Query: 182 DLQNCIDLIE-KPMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPKPGCQ 358
D CI+L+ + G+L+++++E + K + + F++++ + H S + P P
Sbjct: 165 DNAACIELLTCQSAGVLTLMDKECLLAKGSQEEFLQEVRDYH-SDSEWFFDPDP-----N 218
Query: 359 AAHFAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQFKKGQNKL 487
+ F + HYA V Y G L+KN+D + D ++ F + Q+KL
Sbjct: 219 STAFGVCHYADNVVYETEGLLDKNRDTIPDDIICVFSR-QSKL 260
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 70.5 bits (165), Expect = 8e-13
Identities = 33/57 (57%), Positives = 38/57 (66%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDF 175
IGVLDI G E F NGFEQ IN+ NEKLQ +F +EQEEY EGI W+ ID+
Sbjct: 331 IGVLDIYGFESFKVNGFEQFSINYVNEKLQNLFIDFTLKMEQEEYAEEGISWSDIDY 387
>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
Length = 1017
Score = 61.3 bits (142), Expect = 5e-10
Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Frame = +2
Query: 74 FTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMDLQNCIDLIEKP-MGILSILEEES 250
F +QQ H+ L + +GIEWT I++ + C +LIEK GIL++L+EE
Sbjct: 281 FVLNLIQQPLRHY-PLYHPFKPTVKGIEWTTIEYFNNAVIC-ELIEKNHSGILALLDEEC 338
Query: 251 MFP-KATDQTFVEKLNNNHLG-------KSAPYLKPKPPKPGCQAAHFAIGHYAGYVGYN 406
+ P + +D TF+EKL+ + K YL K G +F + HYAG V Y+
Sbjct: 339 LRPGEVSDLTFLEKLDKQWIHHEHYESRKDKKYLSDKTLPHG----YFRLKHYAGKVTYD 394
Query: 407 ITGWLEKNKDPL 442
+ G+L+KN D L
Sbjct: 395 VDGFLDKNNDLL 406
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/46 (52%), Positives = 27/46 (58%)
Frame = +2
Query: 11 VLDIAGSEIFDYNGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQRE 148
++D I D N FEQ IN+ NEKLQQIF EQEEY RE
Sbjct: 208 IVDRVNDSIQD-NSFEQFIINYCNEKLQQIFIELTLKSEQEEYVRE 252
>SB_30334| Best HMM Match : Myosin_head (HMM E-Value=8.8e-12)
Length = 280
Score = 56.0 bits (129), Expect = 2e-08
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +2
Query: 5 IGVLDIAGSEIFDYNGFEQLCINFTNEKLQQIFN 106
IGVLDIAG E ++ N FEQ CIN+ NEKLQQ FN
Sbjct: 236 IGVLDIAGFEYYELNSFEQFCINYCNEKLQQFFN 269
>SB_22979| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 55.6 bits (128), Expect = 2e-08
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = +2
Query: 47 NGFEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDF 175
NGFEQ IN+ NEKLQ +F +EQEEY EGI W+ ID+
Sbjct: 2 NGFEQFSINYVNEKLQNLFIDFTLKMEQEEYAEEGISWSDIDY 44
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 16/109 (14%)
Frame = +2
Query: 53 FEQLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDF----------------GMD 184
FE LC N+ E+LQ+ F+H + + E Y +E IE ++ G+
Sbjct: 737 FEDLCHNYECERLQKFFHHTVFTQQMERYGQENIECSYESESIPPDPVVGVFDRAAQGVT 796
Query: 185 LQNCIDLIEKPMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLK 331
+ +DL + G+L IL+EES+FP A D +F+ +L +H +S YL+
Sbjct: 797 RGSTLDLKSEQKGLLWILDEESIFPGANDSSFLARLYVHHCSES-EYLR 844
>SB_30332| Best HMM Match : RVT_1 (HMM E-Value=2.7e-34)
Length = 1683
Score = 50.4 bits (115), Expect = 9e-07
Identities = 35/114 (30%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Frame = +2
Query: 203 LIE-KPMGILSILEEESMFPKATDQTFVEKLN---NNHLGKSAPYLKPKPPKPGCQAAH- 367
LIE K GIL IL+EES PK T F ++ NH + P P +
Sbjct: 174 LIEAKKTGILDILDEESKLPKPTSAHFTSDIHLKHKNHFRLALPRKSPLMYHRNLRDDEG 233
Query: 368 FAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQFKKGQNKLLVEIFADHPGQSGD 529
F I H+AG V Y+ +++KN D L++ + + + ++ + +F G +GD
Sbjct: 234 FLIRHFAGAVCYHTQEFIDKNNDALHNDLAELISESKDSFVKSLFPSASG-NGD 286
>SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1278
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +2
Query: 287 KLNNNHLGKSAPYLKPKPPKPGCQAAHFAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQF 466
K HL KS + KP+ F I H+A +V Y ++G++EKN+D +ND +
Sbjct: 819 KTVQEHLQKSKHFSKPRMSNLA-----FVIHHFADHVEYFVSGFVEKNRDTVNDEHLALL 873
Query: 467 KKGQNKLLVEIFADHPGQS 523
+ +++++ E+F ++ S
Sbjct: 874 RASEDEMVGEMFTENDAHS 892
>SB_25537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +2
Query: 113 MSLLEQEEYQREGIEWTFIDFGMDLQNCIDLIE-KPMGILSILEEES 250
+S L +EY E IEW +DF +D C++LI +P G++ +++EES
Sbjct: 136 ISDLLMDEYITEDIEWRNVDF-VDNYTCLELISGRPTGVMHLIDEES 181
>SB_1078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 136
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2
Query: 368 FAIGHYAGYVGYNITGWLEKNKDPL 442
F I HYAG V Y++ +L+KNKD L
Sbjct: 14 FCIKHYAGNVIYSVEEFLDKNKDTL 38
>SB_22206| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-38)
Length = 362
Score = 32.3 bits (70), Expect = 0.26
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +3
Query: 96 RSLTITCPCSSKRSTSAKALNGLSLILAWTCKIALTLLKSLWVSSPFLRKSLCSR 260
R I P S + + +N + LIL WT + +TL+ + W S P K L ++
Sbjct: 123 RYQAIVHPLSYHAKMTRRTVNKI-LILVWTIPMVITLVPAFWYSQPLNIKKLANQ 176
>SB_26467| Best HMM Match : PKD (HMM E-Value=1.1e-06)
Length = 1826
Score = 31.9 bits (69), Expect = 0.34
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 287 KLNNNHLGKSAPYLKPKPPKPGCQAAHFAIGHYAGYVGYNITGWLEKNKDPLNDTVVDQF 466
K +N + +S ++ P PPKP H G +AGY N L+ N P N + V +
Sbjct: 1494 KDHNGRMKRSCVFIPPPPPKPTTPPKH-GSGGFAGYRAPN----LDYNGQPFNTSQVPHY 1548
>SB_399| Best HMM Match : Glycos_transf_2 (HMM E-Value=0.96)
Length = 488
Score = 31.1 bits (67), Expect = 0.60
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Frame = +2
Query: 77 TNEKLQQIFNHHMSL-LEQEEYQREGIEWTFIDFGMDLQNCIDLIEKP-MGILSILEEES 250
+ EK +Q N + L + EEY+ E + F G +L NC + P + +++IL
Sbjct: 110 SREKPKQDVNTSVILDVCPEEYRGENFGYPFFHTGWELSNCSNARSLPEVRVITILLNTI 169
Query: 251 MFPKATDQ---TFVEKLNNNHLGKSAPYLKPKP 340
+P+ DQ ++ +N+ + G KP
Sbjct: 170 AYPEQDDQHITNVLQGINSTYPGVQVILSSTKP 202
>SB_17403| Best HMM Match : I-set (HMM E-Value=0)
Length = 671
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = -1
Query: 241 LKNGEDTHRLFNKVNAILQVHAKINESPFNAFALVLLLLEQGHVMV 104
L GEDT+ F + A + H +N + ++ + + +L ++GHV+V
Sbjct: 68 LDPGEDTNGFFQVIWARHEPHGWVNLAVKSSLSGISILRDEGHVLV 113
>SB_43702| Best HMM Match : SERTA (HMM E-Value=0.034)
Length = 351
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 167 IDFGMDLQNCIDLIEKPMGILSILEEESMFPKATDQTFVEKLNNNHLGKSAPYLKPKPPK 346
+DF LQN +D+ E + +++E SM P T Q+ ++ L +N + PPK
Sbjct: 169 MDFDTLLQNLLDICEPLGNVEDLMKEYSMDPTLT-QSSLDILGHNDPFLPGMFEGGGPPK 227
Query: 347 PG 352
G
Sbjct: 228 WG 229
>SB_17221| Best HMM Match : Neur_chan_memb (HMM E-Value=1.5e-10)
Length = 624
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 9 VYWILLVPKFSTTTVLSNSALTSQTRNCSRSLTITCPCSS 128
V+W+ + + +T SA TS +R+C L ++ P ++
Sbjct: 572 VHWMDKYSRINASTAAKISATTSASRSCQLMLAVSAPLNT 611
>SB_56007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 392 YVGYNITGWLEKNKDPLNDTVVDQFKK 472
+ GY GW++KN P + DQF K
Sbjct: 16 FYGYACGGWIKKNIRPAKNPKWDQFSK 42
>SB_11569| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -3
Query: 269 QWLSGT*TLPQEWRGYP*AFQ*GQCNFAGPCQNQ*KSIQC 150
QWLS T L W G P Q C G C + K C
Sbjct: 437 QWLSRTGVLQNYWGGAPADRQICACGVDGTCADPTKYCNC 476
>SB_10656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1931
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/55 (27%), Positives = 28/55 (50%)
Frame = +2
Query: 59 QLCINFTNEKLQQIFNHHMSLLEQEEYQREGIEWTFIDFGMDLQNCIDLIEKPMG 223
Q IN + + Q N + +Y+++ +TF+ FG D+ N +D+ + P G
Sbjct: 1845 QKAINMAEDLVMQAMNKLTNA--SNDYKQK---FTFVLFGADIMNVVDVEDHPSG 1894
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,504,175
Number of Sequences: 59808
Number of extensions: 334016
Number of successful extensions: 1264
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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