Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0037
(809 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 1e-35
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 8e-17
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 79 4e-15
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 70 3e-12
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 68 1e-11
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-10
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 7e-10
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 61 9e-10
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 60 2e-09
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 55 8e-08
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 53 3e-07
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 53 3e-07
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 52 6e-07
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 51 1e-06
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 50 3e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 49 5e-06
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 48 7e-06
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 48 1e-05
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 46 3e-05
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 46 4e-05
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 46 5e-05
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 42 4e-04
SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059) 42 4e-04
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 42 6e-04
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 41 0.001
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 41 0.001
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 39 0.006
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 39 0.006
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 38 0.010
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 38 0.013
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 37 0.017
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 37 0.022
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 36 0.039
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.039
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 35 0.068
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 35 0.068
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.090
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 34 0.12
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 34 0.16
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 33 0.27
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 33 0.36
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.36
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 33 0.36
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 32 0.48
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 32 0.48
SB_52747| Best HMM Match : Semialdhyde_dh (HMM E-Value=6.5) 32 0.63
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 32 0.63
SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.63
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 30 1.9
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 30 1.9
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 30 1.9
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 30 1.9
SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 30 2.6
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 30 2.6
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 30 2.6
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_28446| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
SB_56000| Best HMM Match : HSA (HMM E-Value=2.8) 28 7.8
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 28 7.8
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 28 7.8
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 28 7.8
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 146 bits (355), Expect = 1e-35
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +2
Query: 53 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 232
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT
Sbjct: 5925 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 5984
Query: 233 AGQEDYDR 256
AGQEDYDR
Sbjct: 5985 AGQEDYDR 5992
Score = 144 bits (350), Expect = 6e-35
Identities = 66/77 (85%), Positives = 71/77 (92%)
Frame = +1
Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMK 456
DTDVILMCFS+DSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR D T EL+KMK
Sbjct: 6000 DTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRMDENTKRELQKMK 6059
Query: 457 QEPVKPQEGRAMAEKIN 507
QEPVK +EGRAMA+KI+
Sbjct: 6060 QEPVKIEEGRAMADKIS 6076
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/39 (82%), Positives = 36/39 (92%)
Frame = +3
Query: 510 FAYLECSAKSKEGVREVFETATRAALQVKKKKKTRCSLL 626
+AYLECSAK+K+GVREVFETATRAALQ KKKKK +C LL
Sbjct: 6078 YAYLECSAKTKDGVREVFETATRAALQTKKKKKGKCVLL 6116
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 89.8 bits (213), Expect = 2e-18
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +1
Query: 280 TDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQ 459
TDV L+CFSV SP S EN+ EKW PE+ H CP P +LVG + DLR+D TI +L K KQ
Sbjct: 75 TDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQVDLRDDQGTIEKLSKNKQ 134
Query: 460 EPVKPQEGRAMAEKINGL 513
+P+ + +A ++ +
Sbjct: 135 KPIAVEAAEKLARELRAV 152
Score = 86.6 bits (205), Expect = 2e-17
Identities = 37/62 (59%), Positives = 47/62 (75%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+NY + + G+ L L+DTAGQEDY
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDY 64
Query: 251 DR 256
DR
Sbjct: 65 DR 66
Score = 36.7 bits (81), Expect = 0.022
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +3
Query: 516 YLECSAKSKEGVREVFETATRAALQ-VKKKKKTRCSLL 626
Y+ECSA +++G++ VF+ A AAL+ + +KK +C LL
Sbjct: 154 YVECSALTQKGLKNVFDEAILAALEPPEPQKKKKCRLL 191
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 84.6 bits (200), Expect = 8e-17
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
KLV+VGDG GK+ LI + + FP Y+PTVF+NY ++I +DGK + LWDTAGQEDY
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKAYNVGLWDTAGQEDY 66
Query: 251 DR 256
DR
Sbjct: 67 DR 68
Score = 76.2 bits (179), Expect = 3e-14
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +1
Query: 280 TDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQ 459
TDV L+CF + S S ENI KW PE+ H P P ILVGNK+DLR+ + +
Sbjct: 77 TDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKILVGNKRDLRSAQQNTSLSNHRSR 136
Query: 460 EPVKPQEGRAMAEKINGLHIWNA 528
+P+ +EG+A+A+++ ++ N+
Sbjct: 137 DPITYEEGKALAKRLGMQYLENS 159
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 79.0 bits (186), Expect = 4e-15
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = +2
Query: 50 PMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 229
P IR +++VGD CGKT LL + ++QF E Y TVF + +EVDG+++EL LWD
Sbjct: 227 PNGQIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWD 286
Query: 230 TAGQEDYD 253
T+G EDYD
Sbjct: 287 TSGHEDYD 294
Score = 63.7 bits (148), Expect = 2e-10
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +1
Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINEL-RKM 453
+ D++L+CF + P + ++I EKW EV CPN P++LVG K+DLR++ +++L K+
Sbjct: 303 NVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVLLVGCKQDLRSEVNIVSKLASKV 362
Query: 454 KQEPVKPQE 480
Q+PV E
Sbjct: 363 CQQPVTSLE 371
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 69.7 bits (163), Expect = 3e-12
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
K VIVGDG GKT LL+ + D FP YVPT F+ Y +EV+ K + DTAGQED+
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQEDF 79
Query: 251 D 253
D
Sbjct: 80 D 80
Score = 68.1 bits (159), Expect = 8e-12
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +1
Query: 283 DVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQE 462
DV ++CFSV SP S N+ KW PE++ F P PIILVG DL++ + EL + +
Sbjct: 91 DVFIVCFSVVSPTSFANVASKWIPEIREFQPKAPIILVGTHSDLKDCYKILTELSQQDSQ 150
Query: 463 PVKPQEGRAMAEK 501
P+ ++ + +K
Sbjct: 151 PISVKKAEGLVKK 163
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 67.7 bits (158), Expect = 1e-11
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = +1
Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 423
DTDV ++CF + +P S +N+ W PE+KH+ P P+++VGNKKD+R +
Sbjct: 92 DTDVFIICFDITNPTSFQNVSTVWVPELKHYMPETPVLVVGNKKDMRTN 140
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +2
Query: 65 RKKLVIVGDGACGKTCLLI-VFSKDQFP-EVY------VPTVFENYVADIEVDGKQVELA 220
R KL +VGD GKTC+L F + Q P +VY +P V E++ + D +
Sbjct: 8 RLKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVT 67
Query: 221 LWDT 232
WDT
Sbjct: 68 YWDT 71
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 516 YLECSAKSKEGVREVFETATRAALQVKKKKKT 611
Y E S + EG+REV TA R A+Q + + +T
Sbjct: 224 YRESSGYTGEGIREVVGTAVRLAVQHRLQTQT 255
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 63.7 bits (148), Expect = 2e-10
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +1
Query: 346 WTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEPVKPQEGRAMAEKINGL 513
W PEV H CPN PI+LVG K DLR+D TI++L++ K P+ +G MA++I +
Sbjct: 576 WYPEVSHHCPNTPIVLVGTKLDLRDDKETIDKLKEKKLGPIGYTQGLQMAKEIGAV 631
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 62.5 bits (145), Expect = 4e-10
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 247
K+++VGD GKTCL+ F+K FP PT+ ++ + ++VDG++V+L +WDTAGQE
Sbjct: 9 KIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQER 68
Query: 248 Y 250
+
Sbjct: 69 F 69
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 62.5 bits (145), Expect = 4e-10
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 417
+TD+ L+CF + S EN+ +W PE+ HF P VP +LVGNKKDLR
Sbjct: 78 NTDIFLVCFDIAHRASFENVALRWLPELDHFSPGVPRVLVGNKKDLR 124
Score = 61.7 bits (143), Expect = 7e-10
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 247
KL IVGDGA GKT L I + + FP Y+PT ++ D VDG + + L+D+AG ED
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGED 67
Query: 248 YDR 256
+DR
Sbjct: 68 FDR 70
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 61.7 bits (143), Expect = 7e-10
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Frame = +1
Query: 286 VILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND-----PATINELRK 450
VI++CF++++P S +++ W PE+K +CP VPIILVG K D R+ L K
Sbjct: 107 VIVLCFAINTPSSFKDVNAVWYPEIKKYCPRVPIILVGTKSDWRSQLNVSVVCQNTSLSK 166
Query: 451 MKQE--PVKPQEGRAMAEKINGLH 516
+E V P GR +A++I+ ++
Sbjct: 167 RMRECFLVSPDMGRQVAKEIDAVY 190
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 61.3 bits (142), Expect = 9e-10
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Frame = +1
Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVG---NKKDLRND-PATINEL 444
DTDV L+CFSV SL+++ +W PE++ FCP P +L+G N + L D ATI+
Sbjct: 138 DTDVFLVCFSVTLQQSLKDVVNRWVPELRRFCPVTPFLLIGTHINWRLLSEDRAATIDPA 197
Query: 445 RKMKQEPVKPQEGRAMAEK 501
R+ P+ P+ G AEK
Sbjct: 198 RR----PIFPETGAMYAEK 212
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 60.1 bits (139), Expect = 2e-09
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 247
KL+++GD GK+ LL+ F+ D F Y+ T+ ++ + + VDGK ++L +WDTAGQE
Sbjct: 10 KLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQER 69
Query: 248 Y 250
+
Sbjct: 70 F 70
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 289 ILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDL 414
I++ + V+ ++ ++ + W EV + C V ILVGNK DL
Sbjct: 84 IVLIYDVNESETFLHLSQ-WLEEVSEYACEGVNTILVGNKCDL 125
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 59.3 bits (137), Expect = 4e-09
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = +1
Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRND 423
DTDV +CFSV DS ++ KW EVK+ PN PII+VG K DLR +
Sbjct: 88 DTDVFCLCFSVGDMDSFRHVENKWYAEVKNCSPNSPIIVVGTKTDLREN 136
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLI--VFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 229
++VI+GD GKTCLL+ + + ++ ++ NYVA+I VDGK +L L D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANIIVDGKVYKLELCD 74
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 54.8 bits (126), Expect = 8e-08
Identities = 26/67 (38%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 247
K++++GD GK+ L+ F D+F T+ + ++ D ++DGK+V+L LWDTAG+E
Sbjct: 12 KVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEEK 71
Query: 248 YDRCGRS 268
Y RS
Sbjct: 72 YRALSRS 78
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 247
KL+I+G+ A GKT L ++ D F +V TV ++ V + + K+V+L +WDTAGQE
Sbjct: 23 KLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQER 82
Query: 248 Y 250
Y
Sbjct: 83 Y 83
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/69 (42%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 53 MAAIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWD 229
MA+ RK K+V+ GD GKT LI ++++ PT F NY +EV ++ L LWD
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNELEGT--PTAFANYELGLEVGSQKFLLDLWD 58
Query: 230 TAGQEDYDR 256
T G +YDR
Sbjct: 59 TEGTTEYDR 67
Score = 48.0 bits (109), Expect = 9e-06
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 280 TDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 417
+D+IL+CF + + + E I KW PE P +L+GNK D+R
Sbjct: 76 SDIILLCFDISNRQTFERIESKWLPETTQVLPGSIRVLIGNKNDIR 121
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 247
K++I+GD GKTCL +FPE T+ + + +E++G+ V+L LWDTAGQE
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQER 107
Query: 248 Y 250
+
Sbjct: 108 F 108
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 52.0 bits (119), Expect = 6e-07
Identities = 25/60 (41%), Positives = 35/60 (58%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
K+V++G G GK+ L + F QF E Y PT+ + Y +IEVD L + DTAG E +
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFYRKEIEVDNNPSILEILDTAGTEQF 64
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
KLV+VG G GK+ L I F + F Y PT+ ++Y +D + L + DTAGQE++
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDERVAHLDILDTAGQEEF 72
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 51.2 bits (117), Expect = 1e-06
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQF-PEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 247
K++IVG+ GK+ LL+ F+ D F P++ + V + V+G + +LA+WDTAGQE
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 248 Y 250
+
Sbjct: 70 F 70
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 49.6 bits (113), Expect = 3e-06
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 247
K+V++GD GK+ LL F++++F T+ + I+V+GK ++ +WDTAGQE
Sbjct: 14 KIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQER 73
Query: 248 Y 250
Y
Sbjct: 74 Y 74
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 340 EKWTPEVK-HFCPNVPIILVGNKKDLRN 420
E+W EV+ H P + ++LVGNK DL++
Sbjct: 104 ERWLLEVREHADPTIVVMLVGNKCDLKH 131
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +2
Query: 68 KKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQED 247
+K+ ++G + GK+ L I F + QF + Y PT+ + +I+ G++ L L DTAGQ++
Sbjct: 7 RKIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTFTKNIKYKGQEFFLELVDTAGQDE 66
Query: 248 Y 250
Y
Sbjct: 67 Y 67
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 48.4 bits (110), Expect = 7e-06
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 247
KLV++G+ A GK+ L++ F K QF E T+ ++ + +D V+ +WDTAGQE
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 248 Y 250
Y
Sbjct: 83 Y 83
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 247
K+V +GD GK+ L F D F E Y PT+ +++ + +D +V L +WDTAGQE
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 248 YDRC 259
+ RC
Sbjct: 225 F-RC 227
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 47.6 bits (108), Expect = 1e-05
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = +2
Query: 35 PESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGK-Q 208
P P + +++++GD GK+ LL F++ QF E PTV + +V +E+ G +
Sbjct: 3 PARMKPKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVR 62
Query: 209 VELALWDTAGQEDY 250
++L +WDTAGQE +
Sbjct: 63 IKLQIWDTAGQERF 76
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 238
K+V VGD GKT L + FP ++ ++F+ Y +E+DGK+ + L DT G
Sbjct: 11 KVVFVGDKNVGKTSFLYAATTHNFPTGFIASIFDGYSKTMEIDGKRYTVLLCDTPG 66
Score = 46.0 bits (104), Expect = 4e-05
Identities = 27/81 (33%), Positives = 42/81 (51%)
Frame = +1
Query: 286 VILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEP 465
V L+CF + + +S NI W P V +VP +LVGNK +LR +L + +
Sbjct: 83 VFLLCFDIANRESFANIESTWLPHVNLETSDVPKVLVGNKMELRCSQQESTDLGQ-THDC 141
Query: 466 VKPQEGRAMAEKINGLHIWNA 528
V E +A+A K N ++ N+
Sbjct: 142 VPFTEAKALACKSNIPYVENS 162
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 247
K+V+ GD A GK+ ++ +++F T+ ++ + + VDGK L LWDTAGQE
Sbjct: 444 KIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQER 503
Query: 248 YDRCGRS 268
+ +S
Sbjct: 504 FRSIAKS 510
Score = 32.3 bits (70), Expect = 0.48
Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +1
Query: 283 DVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRNDPATINELRKMKQ 459
D +L+ + V S ++ + W ++ C VPI+L GNK D+R A N +
Sbjct: 516 DGVLLLYDVTCETSFLDVRD-WVEAIEESCSKPVPIMLCGNKIDIRQSAAAEN------K 568
Query: 460 EPVKPQEGRAMAEKINGLHIWNALPKARKVYVRCLK 567
+ + G +A++ L I + + + + C++
Sbjct: 569 TVITAESGSRLAKEHGALFIETSSKENKNIAEACIE 604
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 46.0 bits (104), Expect = 4e-05
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQED 247
K+V +GD GK+ L F DQ+ + T+ ++ + + V+G+ + + LWDTAGQE
Sbjct: 898 KVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQER 957
Query: 248 Y 250
+
Sbjct: 958 F 958
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 45.6 bits (103), Expect = 5e-05
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 22/82 (26%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFS---------------------KDQFPEVYVPTVFENY-VA 184
KL+++GD GK+CLL+ F+ D + E Y+ T+ ++ +
Sbjct: 10 KLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGVDFKIR 69
Query: 185 DIEVDGKQVELALWDTAGQEDY 250
IE+DGK ++L +WDTAGQE +
Sbjct: 70 TIELDGKTIKLQIWDTAGQERF 91
Score = 33.1 bits (72), Expect = 0.27
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +1
Query: 289 ILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKDL 414
I++ + V +S N+ ++W E+ + C NV +LVGNK DL
Sbjct: 105 IIVVYDVTDQESFNNV-KQWLQEIDRYACENVNKLLVGNKCDL 146
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 45.6 bits (103), Expect = 5e-05
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 238
K+ I+G G GKT LL F +F E +VPTV + ++ + +DG + DTAG
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVDDYFIHSVNMDGVYYSTCIVDTAG 69
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 283 DVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 405
D+ ++CF V + S EN+ KW PE++ + VP++LVG K
Sbjct: 98 DLFILCFDVTNRASFENVASKWFPEIRLYEKKVPLMLVGLK 138
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 43.2 bits (97), Expect = 3e-04
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQVELALWDTAGQED 247
K+++VGD GKT L+ F+K F + TV + + ++ G +V+L WDTAGQE
Sbjct: 13 KVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEK 72
Query: 248 Y 250
+
Sbjct: 73 F 73
Score = 32.3 bits (70), Expect = 0.48
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRNDPATIN 438
+ D +++ F + + + +IP+ W V+ + N+ +LVGNK DL+ +N
Sbjct: 83 NADAVILVFDITNRGTFASIPQ-WLMNVQKYTNKNILKVLVGNKTDLKGASRKVN 136
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 241
K+VI+G+ GK+ L + F +F Y T+ Y D EV G+ V + L DTAG+
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTYRQDAEVAGEVVAIELTDTAGE 919
>SB_2885| Best HMM Match : Ras (HMM E-Value=0.0059)
Length = 141
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +1
Query: 346 WTPEVKHFCPNVPIILVGNKKDLRNDPATINELRKMKQEP 465
W PE+K CP VP +L+G K DLR D A + EP
Sbjct: 1 WAPELKEACPGVPYLLIGCKNDLRTDSALELNFLSVPGEP 40
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 516 YLECSAKSKEGVREVFETATRAALQVKKKKKT 611
Y+EC AK + ++EVF+ A A L + T
Sbjct: 63 YVECCAKMRWNIKEVFQQAAEAILSKEDSNNT 94
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
KL+++GD GKTC+L FS D F ++ T+ EN + + E L+ ++
Sbjct: 11 KLLLIGDSGVGKTCILFRFSDDAFNTTFISTI-ENVLLNTLAHTLNFERTLFRHGNSGNF 69
Query: 251 DR--CGRSRIQIRM*SSCA 301
DR C SR + C+
Sbjct: 70 DRSICTISRFGLGKYGDCS 88
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +2
Query: 35 PESSGPMAAI-RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQV 211
PE S A R KL +VGD GKT LL K EV +FE V D+ +
Sbjct: 50 PEQSDTHATSERYKLSVVGDAESGKTSLLNALVKSDI-EVEETVIFEECVTDVTSGDSNL 108
Query: 212 ELALWDTA 235
E LWD++
Sbjct: 109 EFMLWDSS 116
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 241
++ ++GD GKT LL+ F +F Y PT+ + Y I +D V L + DTA +
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSINIDDVTVTLEILDTASR 63
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDT 232
K+V++GD GK+ LL F++++F T+ E I+VDGK ++ +WDT
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTA 235
K+V++GD GK+ LL ++K++F T+ E ++E++GK V +WDTA
Sbjct: 20 KIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 38.7 bits (86), Expect = 0.006
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 292 LMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 420
++ F V S + +N+P W +++ C N+PI+L GNK D+++
Sbjct: 109 IIMFDVTSRVTYKNVPN-WHRDLERVCENIPIVLCGNKVDIKD 150
Score = 33.1 bits (72), Expect = 0.27
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 83 VGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQEDY 250
VGDG GKT + +F + Y+ T+ E + ++ +WDTAGQE +
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKF 94
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVY--VPTVFENYVADIEVDGKQVELALWDTAGQE 244
K+ + G GKT + S D+FPE + + + ++ + + K++++ LWDT G E
Sbjct: 10 KIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGME 69
Query: 245 DYDRCGRS 268
+Y+ R+
Sbjct: 70 EYESLTRN 77
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 89 DGACGKTCLLIVFSKDQFPEVYVPTVFENYV-ADIEVDGKQVELALWDTAGQEDY 250
DG GK+ L+ F +F T+ ++ D+++DG+ L +WDTAGQE +
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERF 273
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Frame = +1
Query: 280 TDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-----NVPIILVGNKKDL 414
+D+ L+ ++VD S N+ W E ++ N P IL+GNK D+
Sbjct: 284 SDLCLLVYAVDDAKSFTNL-SMWKKEFLYYADVRDQDNFPFILLGNKVDV 332
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 37.9 bits (84), Expect = 0.010
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 12/72 (16%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FE---------NYVADIEVDGKQVE 214
K + +GD GKT LL ++ F +VPT+ F N + G+++
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIH 167
Query: 215 LALWDTAGQEDY 250
L LWDTAGQE +
Sbjct: 168 LQLWDTAGQERF 179
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGK-QVELALWDTAGQED 247
++V++G G GKT L+ F F E Y PTV + Y + + L + DTAG
Sbjct: 109 RVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSYP 168
Query: 248 YDRCGRSRIQ 277
+ + IQ
Sbjct: 169 FPAMKKLTIQ 178
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 277 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 414
+ D ++ +SVD SL+ E V VP++LVGNK DL
Sbjct: 179 NADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDL 224
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 247
K+V++G+ GKT L ++ F T+ ++ +++ KQV L++WDTAG E
Sbjct: 13 KVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGVER 72
Query: 248 Y 250
+
Sbjct: 73 F 73
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 36.7 bits (81), Expect = 0.022
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Frame = +2
Query: 140 FPEVYVPTVFENY-VADIEVDGKQVELALWDTAGQEDY 250
F Y+ T+ ++ + I +DG++V+L +WDTAGQE +
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERF 39
Score = 33.9 bits (74), Expect = 0.16
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 280 TDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD 411
T +++ + V S D+ N+ ++W E+ C +V ILVGNK D
Sbjct: 50 THGVIVVYDVTSADTFVNV-KRWLHEIDQNCDDVIRILVGNKDD 92
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 35.9 bits (79), Expect = 0.039
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVP-TVFENYV--ADIEVDGKQVELALWDTAGQ 241
K +I+G+ GK+CL+ F +V TV N + D K+++L + DTAGQ
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQ 411
Query: 242 EDY 250
E Y
Sbjct: 412 ERY 414
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 35.9 bits (79), Expect = 0.039
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT 232
K+ I+G A GKT L+ K F ++PT+ + + + DG + L DT
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTIDDYIIHALNQDGVHYNVCLVDT 242
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 35.1 bits (77), Expect = 0.068
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +2
Query: 65 RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 244
R +V G + GKT L++ F F + Y PT+ + ++ + + + EL + DT+G
Sbjct: 28 RFTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIEDFFIKHVFFNNETYELQIIDTSGTY 87
Query: 245 DY 250
++
Sbjct: 88 EF 89
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 35.1 bits (77), Expect = 0.068
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY 178
K+V++G G GK+ L + F QF E Y PT+ + Y
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIEDFY 40
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 34.7 bits (76), Expect = 0.090
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 74 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTA 235
LV++G GK+ LL+ F +F Y PT+ Y +D L + DTA
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATIDEDPATLHITDTA 183
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 292 LMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKDLRND-PATINELRKMKQE 462
L+ + + S ++ ++ W + + PN+ IILVGNKKDL D T E + QE
Sbjct: 172 LLVYDISSRETFNSLTN-WLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQE 229
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 188 IEVDGKQVELALWDTAGQEDYDRCGRS 268
+ V GK V+L +WDTAGQE + RS
Sbjct: 137 VNVGGKSVKLQIWDTAGQERFRSVTRS 163
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 33.9 bits (74), Expect = 0.16
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 292 LMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 420
L+ + + + EN+ E+W E++ H N+ I+LVGNK DLR+
Sbjct: 10 LLVYDIAKHLTYENV-ERWLKELRDHADSNIVIMLVGNKSDLRH 52
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +2
Query: 53 MAAIRKKLVIVGDGACGKTCLLIVFSKD--QFPEVYVPTV 166
M +R K+++ GD GK+ L+ VF D +P+ Y TV
Sbjct: 1 MVVLRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTV 40
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 244
+L++VG A GKT +L D+ P +PT+ N V+ K ++ +WD GQ+
Sbjct: 92 RLLMVGLDAAGKTTILYHLKLDE-PVNTIPTIGFNVEV---VEYKNIKFTVWDIGGQD 145
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 32.7 bits (71), Expect = 0.36
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 197 DGKQVELALWDTAGQEDYD 253
+G+ + L LWDTAGQE++D
Sbjct: 30 NGEDIRLMLWDTAGQEEFD 48
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 292 LMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKD 411
++ F V S E +P W +V+ C + +P++LVGNK D
Sbjct: 50 VIVFDVTDRKSFERVPT-WLDKVQEHCGHEIPVVLVGNKTD 89
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 32.3 bits (70), Expect = 0.48
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 56 AAIRKKLVI--VGDGACGKTCLLIVFSKDQFPEVYVPTVFE 172
+A KKL I +G+G GK+ L+ F + F E YVPT+ E
Sbjct: 22 SAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTIEE 62
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
+L +VG G GK+ + I + K++F E I+ GK ++ + DTAGQE+Y
Sbjct: 2600 RLCVVGSGGVGKSSVTIRYLKNEFTE-------------IDYCGKLYDIEVVDTAGQEEY 2646
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 32.3 bits (70), Expect = 0.48
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 289 ILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPI-ILVGNKKDLRND 423
+++ + + D+ +N+ +W +V+ + P I +LVGNKKDL +
Sbjct: 122 VIIAYDITKCDTFKNVI-RWGEDVQKYAPENAIKLLVGNKKDLERE 166
>SB_52747| Best HMM Match : Semialdhyde_dh (HMM E-Value=6.5)
Length = 144
Score = 31.9 bits (69), Expect = 0.63
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 53 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQ---VELAL 223
MAA + + +VG G G T L + +D P V V + +++ D DG + L
Sbjct: 1 MAASARSVAVVGCGCIGITAALSILERD--PCVRVTIISDSFSPDNTTDGAAGILLPFVL 58
Query: 224 WDT 232
WDT
Sbjct: 59 WDT 61
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 31.9 bits (69), Expect = 0.63
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 74 LVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 241
+ ++G GK+ + +F Y P + NY +E+DG+ + L + DTAG+
Sbjct: 184 VAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSMEIDGQYLALDVLDTAGK 239
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 31.9 bits (69), Expect = 0.63
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 241
+L +VG GKT + V + QF E +PTV N +V V + +WD GQ
Sbjct: 22 ELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNM---RKVSKGNVTIKVWDIGGQ 75
>SB_17192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 31.9 bits (69), Expect = 0.63
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 277 DTDVILMCFSVDSPDSLENIPEK 345
DTDV L+CF + +P SL+++ +K
Sbjct: 15 DTDVFLVCFDIGNPSSLQSVIDK 37
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 289 ILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKDLRND 423
+++ + + +S N+ KW EV+ + V +ILVGNK DL D
Sbjct: 395 VMIVYDITKRESYNNL-HKWLMEVETYASEGVHMILVGNKIDLDTD 439
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPT 163
K+VI GD GKTC+ F E Y+PT
Sbjct: 227 KIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 250
++ + G GKT ++ F +F E Y PTV + Y + +G + L D++G +
Sbjct: 10 EIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTVEDCYSKVLNKNGSIMVLNTTDSSGSYQF 69
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 30.3 bits (65), Expect = 1.9
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 376 NVPIILVGNKKDLRN-----DPATINELRKMKQEPVKPQEGRAMAEKINGL---HIWNAL 531
+VP+++V NK+DL N D A L K+K+ P+ QE A A +GL H W L
Sbjct: 71 DVPVVVVANKQDLPNVLKAGDIAEHLGLLKLKRNPLHVQE--AFASNGDGLCEAHKW--L 126
Query: 532 PKAR 543
P +R
Sbjct: 127 PNSR 130
>SB_59209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1002
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 388 ILVGNKKDLRNDPAT--INELRKMKQEPVKPQEGRAMAEKINGL 513
I V K D + P T I+ L+ + VKP+EG A AE+I +
Sbjct: 256 IKVEGKSDNKTQPTTNGIDLLQNQQTNDVKPKEGSAKAEEIGSV 299
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 200 GKQVELALWDTAGQEDY 250
GK+++L +WDTAGQE +
Sbjct: 2 GKKIKLQIWDTAGQERF 18
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 292 LMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 420
++ + + S N+ KW E++ H ++ IIL+GNK DL++
Sbjct: 20 VLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDLKH 62
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 292 LMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRN 420
++ + + S N+ KW E++ H ++ IIL+GNK DL++
Sbjct: 20 VLVYDIAKGTSFMNL-NKWVEELRQHASDDLSIILIGNKSDLKH 62
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 289 ILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRND 423
IL+ + + + DS ++I + W ++ + PNV +L+GNK D ++
Sbjct: 5 ILLVYDITTEDSFKHISQ-WLQNIEDNASPNVCKVLLGNKLDAEDE 49
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 244
++++VG A GKT +L + +PT+ N + V+ K + +WD GQ+
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVES---VEYKNISFTVWDVGGQD 72
>SB_28446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 595
Score = 28.7 bits (61), Expect = 5.9
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = -1
Query: 572 CCFKHLTYTFLAFGRAFQICKPLIFS 495
C +KH+TYT G+++++ + L++S
Sbjct: 143 CDWKHITYTSKVQGQSYEVIRRLVYS 168
>SB_56000| Best HMM Match : HSA (HMM E-Value=2.8)
Length = 410
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -2
Query: 214 FHLFSIHFDVGNVILKHCRHVYFRELIL--AEHYQQTCFTACTVTDDY*LFAYR 59
FHL +H +V + RH++ R ++ A + C TA +T D LF+ R
Sbjct: 286 FHLVGMHSNVFTRTARLPRHLFHRRKVIEFALWIRDCCITAALLTRDGCLFSAR 339
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 244
++V++G A GKT +L + +PT+ N V ++ K V L +WD GQ+
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKETVST-IPTIGFN-VETLQPT-KNVTLTIWDVGGQD 75
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +1
Query: 292 LMCFSVDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKKDLRNDPATINELRKM 453
L F+V++ S E+I ++ ++K VP++LVGNK DL + ++ +++
Sbjct: 305 LCVFAVNNSKSFEDI-NQYREQIKRVKDAEEVPMVLVGNKCDLPQRTVSTSDAQEL 359
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +2
Query: 71 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQE 244
++++VG A GKT +L + +PT+ N V+ K + +WD GQ+
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVET---VEYKNISFTVWDVGGQD 72
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,530,347
Number of Sequences: 59808
Number of extensions: 552445
Number of successful extensions: 1636
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -