Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0065
(403 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 163 5e-41
SB_19199| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_3513| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.001
SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24) 31 0.35
SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.35
SB_33518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.61
SB_39360| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_22093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 27 4.3
SB_9070| Best HMM Match : TPR_1 (HMM E-Value=2.7e-39) 27 5.7
SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22) 27 5.7
SB_54602| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_33148| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-09) 27 7.6
SB_43749| Best HMM Match : Lipase_GDSL (HMM E-Value=0.077) 27 7.6
SB_38537| Best HMM Match : VWA (HMM E-Value=0) 27 7.6
SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10) 27 7.6
SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25) 27 7.6
SB_34419| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_55554| Best HMM Match : AAA (HMM E-Value=0.022) 26 10.0
SB_41863| Best HMM Match : Sushi (HMM E-Value=3.2e-34) 26 10.0
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 163 bits (396), Expect = 5e-41
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = +1
Query: 1 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKV 180
EVLKTALIH GL GLHEAAK+LDKR+A LC+L+ NCDEA Y KLV+ALC EH IPL+KV
Sbjct: 27 EVLKTALIHDGLSRGLHEAAKSLDKREAHLCILSNNCDEAMYVKLVEALCAEHGIPLLKV 86
Query: 181 DNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIK 279
D++KKLGEWAGLCKIDK+GKARK+VGCSCVV+K
Sbjct: 87 DDSKKLGEWAGLCKIDKEGKARKVVGCSCVVVK 119
>SB_19199| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 68
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 70 DKRQAVLCVLAEN--CDEA--AYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 213
D LCVL EN D + +L++A C E+ IP+VKVD+++KL AG
Sbjct: 2 DPDDVTLCVLVENRHADPGIQVHCRLIEAFCWEYPIPVVKVDSSRKLKTIAG 53
>SB_3513| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = +1
Query: 70 DKRQAVLCVLAEN--CDEA--AYKKLVQALCNEHQIPLVKVDNNKKLGEWAG 213
D LCVL EN D + +L++A C E+ IP+VKVD+++KL AG
Sbjct: 2 DPDDVTLCVLVENRHADPGIQVHCRLIEAFCWEYPIPVVKVDSSRKLKTIAG 53
>SB_55500| Best HMM Match : Ribosomal_L7Ae (HMM E-Value=2.8e-24)
Length = 172
Score = 31.1 bits (67), Expect = 0.35
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 40 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 204
+G++ ++ ++A L V+A + D + ALC + Q+P V +LG+
Sbjct: 47 YGINHITSLVENKKAQLVVIAHDVDPIEIVVWLPALCRKMQVPYCIVKGKARLGK 101
>SB_16903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 31.1 bits (67), Expect = 0.35
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +1
Query: 40 HGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGE 204
+G++ ++ ++A L V+A + D + ALC + Q+P V +LG+
Sbjct: 138 YGINHITSLVENKKAQLVVIAHDVDPIEIVVWLPALCRKMQVPYCIVKGKARLGK 192
>SB_33518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 30.3 bits (65), Expect = 0.61
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -2
Query: 192 FVVVNLDQWNLMFVAQSLNKFLVCGFITVLSQNT*YCLPLVKSFSGFV 49
F VNL +W++ F A +L+++ +C F TV C V F F+
Sbjct: 256 FQAVNLSRWSMCFQAVNLSRWFMC-FQTVNLSRWFMCFQAVNLFRWFM 302
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 210 SPFSKLFVVVNLDQWNLMFVAQSLNKFLVC 121
S +S F VNL +W + F A +L+++ +C
Sbjct: 178 SRWSMCFQTVNLSRWFMCFQAVNLSRWFMC 207
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 192 FVVVNLDQWNLMFVAQSLNKFLVC 121
F VNL +W + F A +L+++L+C
Sbjct: 112 FQAVNLSRWFMCFQAVNLSRWLMC 135
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 192 FVVVNLDQWNLMFVAQSLNKFLVC 121
F VNL +W + F A +L+++L+C
Sbjct: 196 FQAVNLSRWFMCFQAVNLSRWLMC 219
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 192 FVVVNLDQWNLMFVAQSLNKFLVC 121
F VNL +W + F A +L+++L+C
Sbjct: 316 FQAVNLSRWFMCFQAVNLSRWLMC 339
>SB_39360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 276 DDNTGAADNFPCLAILVNLAETSPFSKLF 190
DD +D +PC+ I+VN++ T +K F
Sbjct: 10 DDGLTCSDVYPCVEIMVNISSTGSETKKF 38
>SB_22093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 742
Score = 28.3 bits (60), Expect = 2.5
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Frame = +1
Query: 46 LHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKK----LGEWAG 213
LH+ LD A + +L N + Q L P+ DN + + ++ G
Sbjct: 363 LHQRGVNLDTTTANMTILTSNIIQQLNNVSFQGLTG----PVSFTDNQRNGIIAIKQFQG 418
Query: 214 LCKIDKDGKARKIVGC 261
+ +DK K R ++GC
Sbjct: 419 MAPLDKPAKIRLVIGC 434
>SB_7961| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1957
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 28 GGLVHGLHEAAK--ALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQI 165
G L LHE +K +L R A+ C ++E + +++V N H I
Sbjct: 167 GSLHFVLHETSKEISLPDRVAIFCDVSEGLEFLKSRRIVHCFLNSHSI 214
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 300 SVGCAQGLPQVVELILRCNANPY 368
S+ CA G VVEL+L ANPY
Sbjct: 83 SLACAGGHLAVVELLLAHGANPY 105
>SB_9070| Best HMM Match : TPR_1 (HMM E-Value=2.7e-39)
Length = 278
Score = 27.1 bits (57), Expect = 5.7
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Frame = +1
Query: 28 GGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEW 207
GGL L + KA++ + LC+ + +E +K N + DN + + +
Sbjct: 108 GGLYSSLGDNGKAMENYKNALCIFEKLGEE---RKQADVYSNIGAVFKSLGDNGQAMENY 164
Query: 208 A-GLCKIDKDGKARK---IVGCSCVVIKDFGEETPALDVLKDYL 327
LC +K G+ RK + V K G+ A++ K+ L
Sbjct: 165 KHALCIYEKFGEERKQADVYSNIGAVFKSLGDNGQAMENYKNAL 208
>SB_7978| Best HMM Match : F5_F8_type_C (HMM E-Value=1.2e-22)
Length = 1151
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +3
Query: 132 TCSGSVQRTSDSTXXXXXXXKAWRMGWSLQD*QGWQGKENCRLLLCCHQRFRRGNSS 302
+C G V+R + T R+ +L D GWQG N C QR R S+
Sbjct: 218 SCVGIVERCNAPTVDLRRMCSCKRVTCTLDDWSGWQGTPNDN--QCATQRRTRTYSA 272
>SB_54602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 26.6 bits (56), Expect = 7.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 133 VSCMRLHHSSQPKHIVLLASCQEL*RLREDRAQDHHGLK 17
VSC +LH S+ KH LA E L E+ + LK
Sbjct: 358 VSCQKLHWSTHKKHCQRLAKEYEQELLMEEEIKRQEELK 396
>SB_33148| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-09)
Length = 330
Score = 26.6 bits (56), Expect = 7.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 25 HGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 138
+G ++ L A + R LCV A CDE ++ LV
Sbjct: 79 NGRVILSLAVADLCIGLRLEALCVFAARCDEMTWRVLV 116
>SB_43749| Best HMM Match : Lipase_GDSL (HMM E-Value=0.077)
Length = 399
Score = 26.6 bits (56), Expect = 7.6
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 220 KIDKDGKARKIVGCSCVVIKDFG 288
++ KD K +K++ CV ++DFG
Sbjct: 214 RLGKDPKTKKVMNPECVNLEDFG 236
>SB_38537| Best HMM Match : VWA (HMM E-Value=0)
Length = 1174
Score = 26.6 bits (56), Expect = 7.6
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -2
Query: 285 EIFDDNTGAADNFPCLAILVNLAETSPFSKLF--VVVNLDQWNLMFVAQSLNKFLVCGFI 112
E F G P I++ A S S+ VVNLD+ N+ +A + GF+
Sbjct: 619 EFFQVKNGMRQGLPRFLIVLASANPSASSEAIESAVVNLDKENVRRIAVGFTEDATPGFL 678
Query: 111 TVLSQN 94
+L+ +
Sbjct: 679 RMLASD 684
>SB_34106| Best HMM Match : Acetyltransf_1 (HMM E-Value=1.1e-10)
Length = 262
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 103 ENCDEAAYKKLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDG 237
E+ + Y ++ +L E Q PL+ V + + E LC + + G
Sbjct: 125 EDFTDLDYNTMMASLIGEEQPPLIAVSDTPAIMEVESLCSLIRGG 169
>SB_11722| Best HMM Match : Fer4 (HMM E-Value=0.25)
Length = 401
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 357 HYT*GLARRLEVVLEHIQRWSFLAEIFD 274
HY RR E+ L+ +Q+W L E F+
Sbjct: 254 HYRWDKLRRAEIDLQRVQQWIKLEEAFE 281
>SB_34419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +2
Query: 104 RTVMKPHTRNLFRLCATNIRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAA 262
RT + RNL R+ + RL ++ +E L + +LTR A++ +S A
Sbjct: 541 RTPVDSIPRNLLRVLTATCGYSQVRLLVSQRIEVWLQNPKLTRPAQELLMSLA 593
>SB_55554| Best HMM Match : AAA (HMM E-Value=0.022)
Length = 1681
Score = 26.2 bits (55), Expect = 10.0
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 1 EVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEA 120
E KT + GL + EA+++LDK Q L LA DEA
Sbjct: 1603 EKTKTGRLQSGLKR-IDEASRSLDKMQQELDQLAPVYDEA 1641
>SB_41863| Best HMM Match : Sushi (HMM E-Value=3.2e-34)
Length = 174
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 231 GWQGKENCRLLLCCHQRFRR-GNSSVGCAQG 320
GW + R+ C+ RFRR G SS C G
Sbjct: 16 GWDFRHGKRIDFYCNSRFRRIGASSSTCNDG 46
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,661,681
Number of Sequences: 59808
Number of extensions: 232419
Number of successful extensions: 668
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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