SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0081
         (553 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      151   5e-37
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             146   1e-35
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              146   1e-35
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             144   3e-35
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         144   3e-35
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              143   7e-35
SB_54| Best HMM Match : Actin (HMM E-Value=0)                          69   2e-12
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)              68   6e-12
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)                  58   6e-09
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  57   8e-09
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)             54   8e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                 54   8e-08
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)                     45   4e-05
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               43   1e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   3e-04
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)                      30   1.1  
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)                 30   1.4  
SB_21074| Best HMM Match : NadA (HMM E-Value=2)                        30   1.4  
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)                    30   1.4  
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.4  
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)                       30   1.4  
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    30   1.4  
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  30   1.4  
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.4  
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)                    29   1.9  
SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)                    29   1.9  
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_42341| Best HMM Match : DUF701 (HMM E-Value=3)                      29   3.3  
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.4  
SB_3115| Best HMM Match : AAA (HMM E-Value=0)                          28   4.4  
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_30821| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)                28   5.8  
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)                    27   7.7  
SB_41722| Best HMM Match : Extensin_2 (HMM E-Value=0.35)               27   7.7  
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)                   27   7.7  
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)             27   7.7  
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)              27   7.7  
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   7.7  
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  
SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1)             27   7.7  
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)                   27   7.7  
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)                 27   7.7  
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)                 27   7.7  
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)              27   7.7  

>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  151 bits (365), Expect = 5e-37
 Identities = 69/73 (94%), Positives = 72/73 (98%)
 Frame = +2

Query: 38  MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
           MCD++VAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 218 SKRGILTLKYPID 256
           SKRGILTLKYPI+
Sbjct: 61  SKRGILTLKYPIE 73



 Score =  134 bits (324), Expect = 5e-32
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +1

Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
           P  HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130

Query: 427 PAMY 438
           PAMY
Sbjct: 131 PAMY 134



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = +3

Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
           VLSLYASGRTTGIV+DS    +   P YEGYA
Sbjct: 140 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171


>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  146 bits (354), Expect = 1e-35
 Identities = 68/73 (93%), Positives = 71/73 (97%)
 Frame = +2

Query: 38  MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
           M D+E+AALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 218 SKRGILTLKYPID 256
           SKRGILTLKYPI+
Sbjct: 61  SKRGILTLKYPIE 73



 Score =  134 bits (324), Expect = 5e-32
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +1

Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
           P  HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130

Query: 427 PAMY 438
           PAMY
Sbjct: 131 PAMY 134



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = +3

Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
           VLSLYASGRTTGIV+DS    +   P YEGYA
Sbjct: 140 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  146 bits (354), Expect = 1e-35
 Identities = 66/73 (90%), Positives = 71/73 (97%)
 Frame = +2

Query: 38  MCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 217
           M D+++AALV+DNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 218 SKRGILTLKYPID 256
           SKRGILTLKYPI+
Sbjct: 61  SKRGILTLKYPIE 73



 Score =  134 bits (324), Expect = 5e-32
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +1

Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
           P  HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 71  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130

Query: 427 PAMY 438
           PAMY
Sbjct: 131 PAMY 134



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 22/34 (64%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
 Frame = +3

Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYE--GYA 551
           VLSLYASGRTTGIV+DS    S   P YE  GY+
Sbjct: 140 VLSLYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  144 bits (350), Expect = 3e-35
 Identities = 66/71 (92%), Positives = 70/71 (98%)
 Frame = +2

Query: 44  DEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 223
           D++VAALV+DNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 224 RGILTLKYPID 256
           RGILTLKYPI+
Sbjct: 62  RGILTLKYPIE 72



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = +3

Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
           VLSLYASGRTTGIV+DS    +   P YEGYA
Sbjct: 102 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 133



 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/21 (76%), Positives = 16/21 (76%)
 Frame = +1

Query: 247 PHRHGIVTNWDDMEKIWHHTF 309
           P  HGIVTNWDDMEKI   TF
Sbjct: 70  PIEHGIVTNWDDMEKIMFETF 90



 Score = 30.3 bits (65), Expect = 1.1
 Identities = 12/19 (63%), Positives = 15/19 (78%)
 Frame = +1

Query: 382 NREKMTHIMFQTFNTPAMY 438
           N + M  IMF+TFN+PAMY
Sbjct: 78  NWDDMEKIMFETFNSPAMY 96


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  144 bits (350), Expect = 3e-35
 Identities = 67/71 (94%), Positives = 70/71 (98%)
 Frame = +2

Query: 44  DEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 223
           ++EVAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 224 RGILTLKYPID 256
           RGILTLKYPI+
Sbjct: 62  RGILTLKYPIE 72



 Score =  134 bits (324), Expect = 5e-32
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +1

Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
           P  HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 70  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129

Query: 427 PAMY 438
           PAMY
Sbjct: 130 PAMY 133



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = +3

Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
           VLSLYASGRTTGIV+DS    +   P YEGYA
Sbjct: 139 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 170


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  143 bits (347), Expect = 7e-35
 Identities = 66/71 (92%), Positives = 70/71 (98%)
 Frame = +2

Query: 44  DEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 223
           +++VAALVVDNGSGMCKAGFAGDDAP AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2   EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 224 RGILTLKYPID 256
           RGILTLKYPI+
Sbjct: 62  RGILTLKYPIE 72



 Score =  134 bits (324), Expect = 5e-32
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = +1

Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
           P  HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEA LNPKANREKMT IMF+TFN+
Sbjct: 70  PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129

Query: 427 PAMY 438
           PAMY
Sbjct: 130 PAMY 133



 Score = 45.6 bits (103), Expect = 3e-05
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = +3

Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
           VLSLYASGRTTGIV+DS    +   P YEGYA
Sbjct: 139 VLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 170


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 30/50 (60%), Positives = 38/50 (76%)
 Frame = +1

Query: 289  KIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNTPAMY 438
            K+W H F ++LRV  E+ PVLLTEA LNPK NRE+M  +MF++FN P MY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMY 2178



 Score = 56.4 bits (130), Expect = 1e-08
 Identities = 22/34 (64%), Positives = 29/34 (85%)
 Frame = +2

Query: 62   LVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQ 163
            +V+DNGSG CKAG + D++P  VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130



 Score = 36.7 bits (81), Expect = 0.013
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +3

Query: 456  VLSLYASGRTTGIVLDSRTVSSTPCPFYEGY 548
            V++LYASGRTTG V D     S   P Y+GY
Sbjct: 2184 VMALYASGRTTGTVFDCGDGVSHTVPVYDGY 2214


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 67.7 bits (158), Expect = 6e-12
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
 Frame = +1

Query: 220 QKRYP-DPQIPHRHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEASLNPKANREK 393
           Q RY  +   P  +GIV NWDDM+ +W +TF  +++ + P    VLLTE  LNP  NREK
Sbjct: 63  QLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREK 122

Query: 394 MTHIMFQTFNTPAMY 438
           M  +MF+ +    +Y
Sbjct: 123 MIEVMFENYQFEGVY 137



 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
 Frame = +2

Query: 56  AALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 229
           + +V DNG+G  K G+AG + P  +FPS+VGRP  R    +  +  KD  VGDEA   R 
Sbjct: 7   SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66

Query: 230 ILTLKYPID 256
           +L + YP+D
Sbjct: 67  MLEVNYPMD 75



 Score = 38.3 bits (85), Expect = 0.004
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = +3

Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
           VL+LYA G  TG+V+DS    +  CP YEG+A
Sbjct: 143 VLTLYAQGLLTGVVIDSGDGVTHICPVYEGFA 174


>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
          Length = 1392

 Score = 57.6 bits (133), Expect = 6e-09
 Identities = 27/39 (69%), Positives = 28/39 (71%)
 Frame = +2

Query: 47   EEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQ 163
            E    LV+D GS M K GFAGDDAP  VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 57.2 bits (132), Expect = 8e-09
 Identities = 22/64 (34%), Positives = 40/64 (62%)
 Frame = +1

Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKMTHIMFQTFNT 426
           P + G++ +WD  EKI  + +   ++     HP+L++EA+ N +  REK+T +MF+ +N 
Sbjct: 3   PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62

Query: 427 PAMY 438
           PA +
Sbjct: 63  PAFF 66



 Score = 33.5 bits (73), Expect = 0.12
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +3

Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGY 548
           VL+ +A+GR+ G+V+DS    ++  P ++GY
Sbjct: 72  VLTAFANGRSNGLVIDSGATQTSAVPVHDGY 102


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = +1

Query: 337 EHPVLLTEASLNPKANREKMTHIMFQTFNTPAMY 438
           +HPVLLTEA LNP+ NREK   + F+TFN PA++
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALF 159



 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 20/32 (62%), Positives = 24/32 (75%)
 Frame = +3

Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
           VLSLYA+GRTTG+VLD+    S   P YEG+A
Sbjct: 165 VLSLYATGRTTGVVLDAGDGVSHSVPIYEGFA 196


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score = 54.0 bits (124), Expect = 8e-08
 Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
 Frame = +2

Query: 32  FKMCDEEVAALVVDNGSGMCKAGFAGDDAPCAVFPSIVGRPRHQGVMVG--MGQKD-SYV 202
           FK+      A+V+DNG G+ K GFAGD  P  + P++VG P+   +++G  +  KD    
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752

Query: 203 GDEAQSKRGILTLKYPIDTESSLTGMT 283
           GD A +K G++ L   +      +GMT
Sbjct: 753 GDAAVAKSGVMHLN-QLSLSLYASGMT 778



 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +3

Query: 459 LSLYASGRTTGIVLDSRTVSSTPCPFYEGY 548
           LSLYASG T G+ L S    +     YEG+
Sbjct: 770 LSLYASGMTLGVCLSSGFSCTQAAVIYEGH 799


>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
          Length = 152

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 22/32 (68%), Positives = 23/32 (71%)
 Frame = +3

Query: 456 VLSLYASGRTTGIVLDSRTVSSTPCPFYEGYA 551
           VLSLYASGRTTG+V DS    S   P YEGYA
Sbjct: 18  VLSLYASGRTTGVVFDSGDGVSHNVPIYEGYA 49


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 43.2 bits (97), Expect = 1e-04
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +1

Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASL 369
           P RH IV +WD ME+ W    +  LR  PE+H  LL   +L
Sbjct: 301 PIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLLAVLAL 341


>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 41.9 bits (94), Expect = 3e-04
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = -1

Query: 160 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 44
           MA  + D GE+G+ SI+S ETGLAHTGAI+  Q  +  V
Sbjct: 1   MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39


>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
          Length = 272

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 216 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259


>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 591

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 411 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454


>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 135 GNTAQGASSPAKPALHIPEPLSTT 64
           GNT +    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
          Length = 892

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = -1

Query: 223 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 59
           FA CL   +   V+LSH + H L A       +HG R+  SCET L    H  A +  + 
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520

Query: 58  GNFFVAHLELVK 23
           G   V  L+  K
Sbjct: 521 GQVDVLLLDFQK 532


>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
          Length = 358

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 274 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317


>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
          Length = 339

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 252 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295


>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 181

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 94  ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137


>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 402

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 94  ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 135 GNTAQGASSPAKPALHIPEPLSTT 64
           GNT +    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 244 IPHRHGIVTNWDDMEKIWHHTFYNE 318
           +P + G + NWD  ++IW +TF  E
Sbjct: 291 LPFQKGFLVNWDVEKQIWDYTFGKE 315


>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 458

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 128 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171


>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
          Length = 570

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      ++LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 176 ICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219


>SB_4052| Best HMM Match : EGF (HMM E-Value=7.2e-05)
          Length = 117

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 86  MCKAGFAGDDAPCAVFPSIVGRPRHQGVMVGMGQKD-SYVGDEAQSKRGI 232
           +CKAGF+GD   C V   + G  +H   + G    D S+  + A+  RG+
Sbjct: 22  ICKAGFSGDGTTCRVDNCVNGCSKHGKCIRGFCICDHSHYFNGAECARGL 71


>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1077

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 35  KMCDEEVAALVVDNG-SGMCKAGFAGDDAPC 124
           ++CD++    + +N    MCKAG+ GD   C
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGDGITC 517


>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 135 GNTAQGASSPAKPALHIPEPLSTT 64
           GNT +    PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563


>SB_42341| Best HMM Match : DUF701 (HMM E-Value=3)
          Length = 651

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 2/82 (2%)
 Frame = +1

Query: 268 TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEASLNPKANREKM--THIMFQTFNTPAMYG 441
           TN+ +   +W H    +    P    V L + ++ P  N E +   H++F+      + G
Sbjct: 496 TNFSESRCVWLHKEEQQTTHRPSRQVVTLVDYAVCPFVNHEVLVKVHLLFEE-RCAVLVG 554

Query: 442 GHPSPCSRCTRPVVPPVSCWTP 507
           G    C R  RP   P+   +P
Sbjct: 555 G---SCRRGCRPRRAPLVALSP 573


>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 221

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 18/57 (31%), Positives = 26/57 (45%)
 Frame = -3

Query: 212 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRRKEHHLLRNRPCTYRSHCLLPTRQLLRR 42
           P  L  +P +  RPS      +  S  +  +   LL  RP TYR+   LP+  LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187


>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
          Length = 913

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
 Frame = +1

Query: 253 RHGIVTNWDDMEKIWHHT---FYNELR---VAPEEHPVLLTEASLNPKAN 384
           R G+V + + + K+WHHT       ++   V   EH  LL + S+ P+ N
Sbjct: 424 RGGVVEHTEPLLKVWHHTQEVCVGHIQGGGVGVVEHTELLLKVSIVPRTN 473


>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
 Frame = +1

Query: 247 PHRHGIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEASLNPKANRE 390
           P    +VT+++  E++  H F +     P    HPV++TE   NP   R+
Sbjct: 134 PFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183


>SB_30821| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +3

Query: 360 GFPQPQ--GQQREDDPYHVPNIQHAR 431
           G+P P+  G+    DP+HV  ++HA+
Sbjct: 46  GYPNPRINGEDNNQDPWHVIRLRHAQ 71


>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 285

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -2

Query: 150 LPTIEGNTAQGASSPAKPALHIPEPLSTTNAATSSSH 40
           L  IE +    A++P  P + +P+ +   +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258


>SB_9925| Best HMM Match : Kinesin (HMM E-Value=0.00094)
          Length = 1671

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = +3

Query: 366 PQPQGQQREDDPYHVP-NIQHARHVRWPSKPVLSLYASGRTTG 491
           P P+  Q+E  PY  P   +    +  PS P   L  S RT G
Sbjct: 99  PSPRHAQKESSPYPFPTKFKEVLRLSQPSAPPALLKTSKRTDG 141


>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
          Length = 419

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 245 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288


>SB_41722| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
          Length = 343

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 23/87 (26%), Positives = 31/87 (35%)
 Frame = +2

Query: 242 KYPIDTESSLTGMTWRRFGIIPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXISCSKHS 421
           +YP+D+  S      R+  I P T     PP NT   +                     +
Sbjct: 125 RYPVDSARSRFSCFQRQSQIPPWTAPEQEPPNNTPPWTAPEPFPPVDSARAGSSMDKARA 184

Query: 422 TRPPCTVAIQARALAVRVRSYHRYRAG 502
             PP      ARA + RVR   RY +G
Sbjct: 185 RSPPVD---SARARSPRVRHQARYHSG 208


>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
          Length = 1287

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 330  PRGTPSPAH*GFPQPQGQQREDDPYH 407
            PR T +P+H   P  QG QR   PY+
Sbjct: 938  PRYTSTPSHPRIPGQQGVQRYPGPYN 963


>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1974

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +3

Query: 369  QPQGQQREDDPYHVPNIQHARHVRWPSKPVLSLYASGR 482
            QPQ QQ++  P +  + Q       PS P    YASG+
Sbjct: 1890 QPQLQQQQQQPSNYQSYQAINMPTQPSYPSYDQYASGQ 1927


>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
          Length = 3810

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 415 TFNTPAMYGGHPSPCSRCTRPVVPPVSCWTPGRCLP 522
           T +TPA YG  P+    C + V  P  C  PGR  P
Sbjct: 235 TGHTPAWYGSCPTGGYYCLQGVSSPQPC-PPGRYAP 269


>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
          Length = 330

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149


>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2396

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 217  LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
            +C      ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 1644 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687


>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 859

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 672 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715


>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3142

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           LC  +   ++LSH + H L         +HG R  +SCET L  T
Sbjct: 857 LCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900


>SB_36161| Best HMM Match : SecIII_SopE_N (HMM E-Value=4.1)
          Length = 535

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 167 RPDGGAFPRSRGTRRKEHHLLRNRPCTYRSHCLL 66
           +P+G + P+ +  ++K HH    +  T R HC+L
Sbjct: 109 KPNGVSSPKKK--KKKHHHKHEEKHFTDRDHCIL 140


>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
          Length = 329

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 227 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270


>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
          Length = 1492

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 217  LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
            +C      ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 1082 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125


>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
          Length = 452

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 25  ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68


>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
          Length = 330

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -1

Query: 217 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 83
           +C      ++LSH + H L A       +HG R  +SCET L  T
Sbjct: 106 ICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,843,833
Number of Sequences: 59808
Number of extensions: 556936
Number of successful extensions: 1757
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 1539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -