Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0014
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43) 39 0.004
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 36 0.046
SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06) 35 0.061
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31) 33 0.25
SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09) 32 0.43
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 32 0.43
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66) 31 0.76
SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0) 31 0.76
SB_26944| Best HMM Match : Conotoxin (HMM E-Value=0.31) 31 1.00
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 31 1.3
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 31 1.3
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 31 1.3
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 30 1.7
SB_32532| Best HMM Match : RHS_repeat (HMM E-Value=3.2e-06) 30 1.7
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 30 1.7
SB_51716| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9) 30 2.3
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 30 2.3
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 30 2.3
SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19) 29 3.0
SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28) 29 3.0
SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034) 29 3.0
SB_27871| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 29 3.0
SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31) 29 4.0
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_54| Best HMM Match : Actin (HMM E-Value=0) 29 4.0
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 29 4.0
SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26) 29 4.0
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 24 5.2
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5) 29 5.3
SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017) 29 5.3
SB_12550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_58287| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069) 28 7.0
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 28 7.0
SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26) 28 7.0
SB_40769| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3) 28 7.0
SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45) 28 7.0
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 28 7.0
SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6) 28 7.0
SB_8007| Best HMM Match : HisKA_3 (HMM E-Value=4.2) 28 7.0
SB_28910| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_12780| Best HMM Match : SAC3_GANP (HMM E-Value=3.7e-07) 28 9.3
SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_2073| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_46953| Best HMM Match : DUF1014 (HMM E-Value=0.83) 28 9.3
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_30679| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_13709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2) 28 9.3
>SB_5745| Best HMM Match : Extensin_2 (HMM E-Value=0.43)
Length = 607
Score = 39.1 bits (87), Expect = 0.004
Identities = 34/116 (29%), Positives = 44/116 (37%), Gaps = 5/116 (4%)
Frame = +2
Query: 47 VSSKAQDKNSSHPGLPKGEPNFAPYNYP-PYRAYEKIKDPHLPAP--PPLVSEKNTVIVK 217
V A N PK +P+ A + P P A PHL A P S T
Sbjct: 23 VPGSAPKYNQPRQTAPKPQPHQATHTQPQPNSAAHTQPQPHLAATTQPQPHSAATTQPQP 82
Query: 218 HDAKQIHLEQNHQYPSKPRNDPSPHYLPS--RTYRTGPSPHAPPHQTLQPAPHTAA 379
H A + + +KP+ + H P T P PH+ H QP PH+AA
Sbjct: 83 HSAATTKPQPHSAATTKPQPHSAVHTKPQPHSAATTQPQPHSAAHT--QPRPHSAA 136
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/92 (28%), Positives = 34/92 (36%)
Frame = +2
Query: 152 IKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSP 331
+K H+P P ++ K Q Q Q S P PH + T P P
Sbjct: 18 LKRLHVPGSAPKYNQPRQTAPKPQPHQATHTQP-QPNSAAHTQPQPHLAAT----TQPQP 72
Query: 332 HAPPHQTLQPAPHTAALPAQDKSGRRLYQPQP 427
H+ T QP PH+AA +PQP
Sbjct: 73 HSAA--TTQPQPHSAATTKPQPHSAATTKPQP 102
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/70 (28%), Positives = 26/70 (37%)
Frame = +2
Query: 218 HDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDK 397
H Q HL Q +P + + P T P PH+ T +P PH+A
Sbjct: 57 HTQPQPHLAATTQ--PQPHSAATTQPQPHSAATTKPQPHSAA--TTKPQPHSAVHTKPQP 112
Query: 398 SGRRLYQPQP 427
QPQP
Sbjct: 113 HSAATTQPQP 122
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 248 NHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQP 427
N + P ++PSP PS + PSP+ P+ + P+P+ ++ P+ D S P
Sbjct: 462 NPSISTSPISNPSPRPHPSPHPSSNPSPNPSPNPSSDPSPNPSSNPSSDPSPNPSSNPSS 521
Query: 428 KP 433
+P
Sbjct: 522 EP 523
Score = 35.9 bits (79), Expect = 0.035
Identities = 39/141 (27%), Positives = 54/141 (38%), Gaps = 11/141 (7%)
Frame = +2
Query: 44 LVSSKAQDKNSSHPGLPKG----EPNFAPYNYPPYR-AYEK----IKDPHLPAPPPLVSE 196
+V++ + P L KG E N + N R AY+K I D L SE
Sbjct: 373 IVNADQTTSQGNKPLLEKGSSVEEVNVSSSNVNSIRKAYDKRIGSISDKALGNDAQQESE 432
Query: 197 --KNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPH 370
K+ KH K +Q S P ++PS P P PH PH + P+P+
Sbjct: 433 GHKSQTFDKHFRKDYKELTAYQKTSNPISNPSISTSP--ISNPSPRPHPSPHPSSNPSPN 490
Query: 371 TAALPAQDKSGRRLYQPQPKP 433
+ P+ D S P P
Sbjct: 491 PSPNPSSDPSPNPSSNPSSDP 511
Score = 35.5 bits (78), Expect = 0.046
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 263 SKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKP 433
S P ++PSP+ + + + T SP + PH + P+PH ++ P+ + S P P
Sbjct: 517 SNPSSEPSPNPISNPSIST--SPISNPHPSSNPSPHPSSNPSSEPSPNPSSNPSSDP 571
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = +2
Query: 263 SKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPA--PHTAALPAQDKSGRRLYQPQPKP 433
S P +DPSP+ + + P+P + P + P PH ++ P+ S +P P P
Sbjct: 505 SNPSSDPSPNPSSNPSSEPSPNPISNPSISTSPISNPHPSSNPSPHPSSNPSSEPSPNP 563
Score = 33.1 bits (72), Expect = 0.25
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 269 PRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKP 433
PR PSPH PS PSP+ + P+ + ++ P+ + S +P P P
Sbjct: 475 PRPHPSPH--PSSNPSPNPSPNPSSDPSPNPSSNPSSDPSPNPSSNPSSEPSPNP 527
Score = 32.7 bits (71), Expect = 0.33
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Frame = +2
Query: 8 HPQXDYCSPHARLVSSKAQDKNSSHPGL-PKGEPNFAPYNYPPYR-AYEKIKDPHLPAPP 181
HP + SPH SS + S +P P +P+ P + P + P + P
Sbjct: 542 HPSSNP-SPHP---SSNPSSEPSPNPSSNPSSDPSPNPSSDPSLSFSPSSSSSPSVRPSP 597
Query: 182 PLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTY--RTGPSPHAPPHQTL 355
L+S N + + + N P P+P P R + T P+P P+ +
Sbjct: 598 NLISNPNRNSNSNSNRNPNPSSNPSPSLSPNPSPNPSTSPYRNHSSNTNPNPSLGPNPSH 657
Query: 356 QPAPHTAALPAQDKS 400
P+ + P Q+K+
Sbjct: 658 NPSFSLSPNPNQNKT 672
Score = 31.1 bits (67), Expect = 1.00
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 269 PRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKP 433
P ++PSPH PS + PSP+ + + P+P+ ++ P+ S P +P
Sbjct: 543 PSSNPSPH--PSSNPSSEPSPNPSSNPSSDPSPNPSSDPSLSFSPSSSSSPSVRP 595
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 YPSK-PRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQP 421
+PS P ++PSP+ PS + PSP+ + + P+P+ ++ P+ + S + P
Sbjct: 478 HPSPHPSSNPSPN--PSPNPSSDPSPNPSSNPSSDPSPNPSSNPSSEPSPNPISNP 531
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 269 PRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKP 433
P +DPSP+ PS + PSP+ + + +P+P+ + P+ S P P
Sbjct: 495 PSSDPSPN--PSSNPSSDPSPNPSSNPSSEPSPNPISNPSISTSPISNPHPSSNP 547
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +2
Query: 170 PAPPPLVSEKNTVIVKHDAKQIHLEQNHQ-YPSK-PRNDPSPHYLPSRTYRTGPSPHAPP 343
P+P P+ N I H N +PS P ++PSP+ PS + PSP+
Sbjct: 523 PSPNPI---SNPSISTSPISNPHPSSNPSPHPSSNPSSEPSPN--PSSNPSSDPSPNPSS 577
Query: 344 HQTLQPAPHTAALPAQDKSGRRLYQP 421
+L +P +++ P+ S + P
Sbjct: 578 DPSLSFSPSSSSSPSVRPSPNLISNP 603
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +2
Query: 185 LVSEKNTVIVKHDAKQIHLEQNHQYP-SKPRNDPSPH-YLPSRTYRTGPSPHAPPHQTLQ 358
++ N +I++H+ + L Q+ YP ++P P+P YLP++ Y P P+ P +
Sbjct: 487 IILRHNLLILRHNL--LILRQHPSYPPTQPSYPPTPSSYLPTQPYYPPPQPYPPTQPSYP 544
Query: 359 PAP 367
P P
Sbjct: 545 PTP 547
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 35.5 bits (78), Expect = 0.046
Identities = 35/132 (26%), Positives = 50/132 (37%), Gaps = 4/132 (3%)
Frame = +2
Query: 2 PFHPQXDYCSPHARLVSSKAQDKNSSHPGLPKGEPN-FAPYNYPPYRAYEKIKDPHLPAP 178
P HP P+ + P LP PN F P P +P +PAP
Sbjct: 224 PLHPHIPPAPPNPSKAIATPNPPMPETP-LPPATPNPFIPPASPNPSIPPAPPNPSIPAP 282
Query: 179 P-PLVS-EKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPS-PHAPPHQ 349
P P + + + + P P P+P Y+P T PS P APP+
Sbjct: 283 PNPSIPLAPPNPYIPPAPPNLFIPSAPPNPHIPPAPPNP-YIP--TAPPNPSIPPAPPNP 339
Query: 350 TLQPAPHTAALP 385
++ PAP ++P
Sbjct: 340 SIPPAPPNPSIP 351
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Frame = +2
Query: 80 HPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPP---LVSEKNTVIVKHDAKQIHLEQN 250
+P +P PN + PP + +P +P PP + + + H+
Sbjct: 258 NPFIPPASPNPSIPPAPPNPSIPAPPNPSIPLAPPNPYIPPAPPNLFIPSAPPNPHIPPA 317
Query: 251 HQYPSKPRNDPSPHYLPSRTYRTGPS-PHAPPHQTLQPAPHTAALP 385
P P P+P P+ PS P APP+ ++ PAP +P
Sbjct: 318 PPNPYIPTAPPNPSIPPAPP---NPSIPPAPPNPSIPPAPPNLFIP 360
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 263 SKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALP 385
+KP P PS T T P+P APP + AP T +P
Sbjct: 170 TKPETKPPKPPAPS-TIPTPPTPPAPPSPPIPTAPPTPPMP 209
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +2
Query: 263 SKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALP 385
+KP P+P +P T T P+P +PP T P P P
Sbjct: 174 TKPPKPPAPSTIP--TPPTPPAPPSPPIPTAPPTPPMPETP 212
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Frame = +2
Query: 236 HLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPP---HQTLQPAPHTAALPAQDKSGR 406
H+ PSK P+P + P+P PP + ++ PAP ++PA
Sbjct: 228 HIPPAPPNPSKAIATPNPPMPETPLPPATPNPFIPPASPNPSIPPAPPNPSIPAPPNPSI 287
Query: 407 RLYQPQP 427
L P P
Sbjct: 288 PLAPPNP 294
>SB_3059| Best HMM Match : REJ (HMM E-Value=4.8e-06)
Length = 2009
Score = 35.1 bits (77), Expect = 0.061
Identities = 40/150 (26%), Positives = 53/150 (35%), Gaps = 6/150 (4%)
Frame = +2
Query: 2 PFHPQXDYCSPHARLVSSKAQDKNSSHPGLPKGEPNFAPYNYPPYRAYEKIKD--PHLPA 175
P P SP+A + H LP P + +Y R I+ PHLP
Sbjct: 826 PHTPSRATSSPYATACRIYPIRHRALH--LPHTPPCASSTSYATTRCIYLIRHRVPHLPH 883
Query: 176 PPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTY----RTGPSPHAPP 343
PP + V++ I H + PR +P+ Y RT PH PP
Sbjct: 884 TPPRSASSPYATVRY-IHPIRHRTLHLPHTPPRAASTPYATARCIYLIRHRTLHLPHTPP 942
Query: 344 HQTLQPAPHTAALPAQDKSGRRLYQPQPKP 433
H T P+ AL R L+ P P
Sbjct: 943 HAT--STPYATALCIYPIRHRALHLPHTPP 970
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 33.5 bits (73), Expect = 0.19
Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 5/152 (3%)
Frame = +2
Query: 2 PFHPQXDYCSPHARLVSSKAQDKNSSHPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPP 181
P HP P V+ +AQ +++ P+G+ ++ P + I+ + P P
Sbjct: 91 PTHPYRQQ-GPAGPPVTCQAQQGSTAQQVTPQGQQGYSGV-VMPVAINQPIQQVYQPNHP 148
Query: 182 PLVSEKNTVIVKHDAKQ---IHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQT 352
+ +N V +Q + Y +PR+ P ++ R+ ++ P PP +
Sbjct: 149 QHIPPQNPVATHWQQQQPLPVPGAVGSPYIHQPRH---PQHVLVRS-QSLPEEPVPPGRG 204
Query: 353 LQPAPHT--AALPAQDKSGRRLYQPQPKPQLQ 442
PAP + P QD+ +QP P+PQ Q
Sbjct: 205 PPPAPQSPPGRGPPQDQQMWVAHQPPPQPQDQ 236
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 33.1 bits (72), Expect = 0.25
Identities = 31/106 (29%), Positives = 34/106 (32%)
Frame = +2
Query: 116 PYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHY 295
P N+ P Y P P PPP N N YP P N P P
Sbjct: 85 PTNFSPNPPYPPPPYPPYPPPPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPP-NAPYPP- 142
Query: 296 LPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKP 433
P+ Y P+P PP L P P P Y P P P
Sbjct: 143 SPNAPYPPPPNPPYPP--PLYPPPPNPP-PPNAPYPPPPYPPPPNP 185
Score = 30.7 bits (66), Expect = 1.3
Identities = 30/116 (25%), Positives = 36/116 (31%), Gaps = 1/116 (0%)
Frame = +2
Query: 83 PGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYP 262
P P P PY PP Y P+ P PPP + N YP
Sbjct: 120 PNAPYPPPPNPPYPPPPNAPYPP--SPNAPYPPPPNPPYPPPLYPPPPNPP--PPNAPYP 175
Query: 263 SKPRNDPSPHYLPSRTYRTGPSP-HAPPHQTLQPAPHTAALPAQDKSGRRLYQPQP 427
P P P+ Y P+P + PP P P P + Y P P
Sbjct: 176 PPPYPPP-----PNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226
Score = 29.5 bits (63), Expect = 3.0
Identities = 27/102 (26%), Positives = 32/102 (31%), Gaps = 1/102 (0%)
Frame = +2
Query: 83 PGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYP 262
P P P PY PP Y +P P PPP + + YP
Sbjct: 104 PPPPYPPPPNPPYPPPPNAPYPPPPNPPYP-PPPNAPYPPSPNAPYPPPPNPPYPPPLYP 162
Query: 263 SKPRNDPSPHYLPSRTYRTGPS-PHAPPHQTLQPAPHTAALP 385
P P P Y P+ P+ PP P P A P
Sbjct: 163 PPPNPPPPNAPYPPPPYPPPPNPPYPPPPNPPYPPPPNAPNP 204
Score = 29.5 bits (63), Expect = 3.0
Identities = 28/90 (31%), Positives = 31/90 (34%)
Frame = +2
Query: 80 HPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQY 259
+P P P APY PPY P+ P PPP N N Y
Sbjct: 161 YPPPPNPPPPNAPYPPPPYP-----PPPNPPYPPP----PNPPYPPPPNAPNPPPPNPPY 211
Query: 260 PSKPRNDPSPHYLPSRTYRTGPSPHAPPHQ 349
P P N P+P Y P P P P Q
Sbjct: 212 PPPP-NAPNPPYPPPPNAPNPPYPPPPNPQ 240
Score = 29.1 bits (62), Expect = 4.0
Identities = 27/94 (28%), Positives = 33/94 (35%), Gaps = 5/94 (5%)
Frame = +2
Query: 104 PNFAPYNYPPYRAYEKIKDPHLPAP-PPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPR-- 274
P + P YPPY P+ P P PP N N YP P
Sbjct: 92 PPYPPPPYPPYPP----PPPYPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAP 147
Query: 275 --NDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPH 370
P+P Y P Y P+P PP+ P P+
Sbjct: 148 YPPPPNPPY-PPPLYPPPPNP-PPPNAPYPPPPY 179
>SB_1457| Best HMM Match : VHS (HMM E-Value=2e-31)
Length = 892
Score = 33.1 bits (72), Expect = 0.25
Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 6/127 (4%)
Frame = +2
Query: 74 SSHPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNH 253
SS P P + N A Y ++ + PH P P ++ +H + L ++
Sbjct: 722 SSAPAPPPPQYNQASMQQLQYGGPQQYQHPHANTPSPTPHQQ----YQH-PQNAGLPADN 776
Query: 254 QYPSKPRNDPS-----PHYLPSRTYRTGPSPHAPPHQTLQPAPH-TAALPAQDKSGRRLY 415
Y P+ DP+ P Y T P PPH A + A ++ G
Sbjct: 777 TYNPSPQGDPNQGGQQPGYGAPPTQGGPPQAQPPPHAPPGQAHYQQLGAAAPNQGGYHPQ 836
Query: 416 QPQPKPQ 436
QP P PQ
Sbjct: 837 QPPPPPQ 843
>SB_50756| Best HMM Match : S-antigen (HMM E-Value=2.4e-09)
Length = 712
Score = 32.3 bits (70), Expect = 0.43
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +2
Query: 83 PGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDA--KQIHLEQNHQ 256
P L +P + + PP+ +K L PP +K H A K HL + Q
Sbjct: 178 PHLTLDKPPHSALDKPPHLTLDKPPHSALDKPPHSALDKPP----HSAPDKPPHLTLDKQ 233
Query: 257 YPSKPRNDPSPHYLPSRTYRT-GPSPHAPPHQTLQPAPHTA 376
P + P L + + T PH+PP TL PH+A
Sbjct: 234 -PHSTLDKPPHLTLDKQPHSTLDKPPHSPPTLTLDKPPHSA 273
Score = 31.5 bits (68), Expect = 0.76
Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 14/106 (13%)
Frame = +2
Query: 101 EPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEK--NTVIVK--HDAKQIHLEQNHQYPSK 268
+P + + PP+ A +K L PP +K ++ + K H A L P
Sbjct: 84 KPPHSALDKPPHSALDKPPHSVLDKPPHSALDKPPHSALDKPPHSALDKPLHSVLDKPPH 143
Query: 269 PRNDPSPHYLPSRTYRTGPS------PHA----PPHQTLQPAPHTA 376
D PH P+ T P PH+ PPH TL PH+A
Sbjct: 144 SALDKPPHLPPTLTLDKPPHSALDKPPHSALDKPPHLTLDKPPHSA 189
Score = 29.1 bits (62), Expect = 4.0
Identities = 35/121 (28%), Positives = 46/121 (38%), Gaps = 6/121 (4%)
Frame = +2
Query: 32 PHARLVSS--KAQDKNSSHPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNT 205
PH+ L A DK H L K P + + PP+ A +K L PP V +K
Sbjct: 54 PHSALDKPPHSALDK-PPHSALDK--PPHSVLDKPPHSALDKPPHSALDKPPHSVLDKPP 110
Query: 206 VIVKHDAKQIHLEQN-HQYPSKPRN---DPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHT 373
L++ H KP + D PH + PH PP TL PH+
Sbjct: 111 HSALDKPPHSALDKPPHSALDKPLHSVLDKPPHSALDKP------PHLPPTLTLDKPPHS 164
Query: 374 A 376
A
Sbjct: 165 A 165
Score = 28.7 bits (61), Expect = 5.3
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Frame = +2
Query: 80 HPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEK--NTVIVK--HDAKQIHLEQ 247
H L K P+ AP + PP+ +K L PP L +K ++ + K H + L++
Sbjct: 211 HSALDK-PPHSAP-DKPPHLTLDKQPHSTLDKPPHLTLDKQPHSTLDKPPHSPPTLTLDK 268
Query: 248 N-HQYPSKPRN---DPSPHYL---PSRTYRTGPSPHA----PPHQTLQPAPHTAA 379
H KP + D PH P + P PH PPH L PH+A+
Sbjct: 269 PPHSALDKPPHSALDKPPHSALDKPPHSVLDKP-PHLALDKPPHSALDKPPHSAS 322
Score = 28.3 bits (60), Expect = 7.0
Identities = 32/131 (24%), Positives = 46/131 (35%), Gaps = 10/131 (7%)
Frame = +2
Query: 83 PGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQN-HQY 259
P L +P + + PP+ A +K L PP +K + L++ H
Sbjct: 154 PTLTLDKPPHSALDKPPHSALDKPPHLTLDKPPHSALDKPPHLTLDKPPHSALDKPPHSA 213
Query: 260 PSKPRN---DPSPHY-LPSRTYRT-GPSPHAP----PHQTLQPAPHTAALPAQDKSGRRL 412
KP + D PH L + + T PH PH TL PH+ DK
Sbjct: 214 LDKPPHSAPDKPPHLTLDKQPHSTLDKPPHLTLDKQPHSTLDKPPHSPPTLTLDKPPHSA 273
Query: 413 YQPQPKPQLQR 445
P L +
Sbjct: 274 LDKPPHSALDK 284
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 32.3 bits (70), Expect = 0.43
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
Frame = +2
Query: 29 SPHARLVSSKAQDKNSSHPGL-PKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNT 205
+P AR + SSH G P+ F+P N PP +++ P APP + T
Sbjct: 214 TPQARAPPHSSTQPLSSHSGSSPQPGSAFSPVNTPPNAQAQQMTPPSSAAPPQSLPGLQT 273
Query: 206 VIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALP 385
+ + PS P++ + H + PSP + PHQ+ P A P
Sbjct: 274 ------SPSLQPPSQRSTPS-PQSMSALHSGKPKRPGMPPSP-SVPHQSQPAVPPAFATP 325
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 31.9 bits (69), Expect = 0.57
Identities = 25/91 (27%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Frame = +2
Query: 182 PLVSEKNTVIVKHDAKQIHLEQN--HQYPSKPRNDPSPHYLPSRTYRTGPSP-HAPPH-Q 349
PL+S K + H + + H PS+ + PSP + + PSP H+ P +
Sbjct: 730 PLLSTKIGALKHSQPSPEHSQPSPEHSLPSQEHSLPSPEHSQPSPEHSQPSPEHSQPSPE 789
Query: 350 TLQPAP-HTAALPAQDKSGRRLYQPQPKPQL 439
QP+P H+ P + QP P+ L
Sbjct: 790 HSQPSPEHSQPSPEHCQPSPEHSQPSPEHSL 820
>SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66)
Length = 264
Score = 31.5 bits (68), Expect = 0.76
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Frame = +2
Query: 92 PKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKP 271
P+ + P P + + ++PH P PP E++ H + Q P +P
Sbjct: 102 PRPQEPHRPQEPPRPQEPHRPQEPHRPLEPPRPQEQHRPQEPHRPLEPTRPQESHRPLEP 161
Query: 272 RNDPSPHYLPSRTYR-TGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKPQ 436
P + P ++R P+ H+ L+P P + R L P+P+ Q
Sbjct: 162 PR-PQEQHRPLESHRPLEPTRPQESHRPLEP-PRPQEPHRPQEPHRPLEPPRPQEQ 215
Score = 31.5 bits (68), Expect = 0.76
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 9/106 (8%)
Frame = +2
Query: 131 PYRAYEKIK--DPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPS 304
P+R E + + H P PP E++ + H + Q P +P PH P
Sbjct: 143 PHRPLEPTRPQESHRPLEPPRPQEQHRPLESHRPLEPTRPQESHRPLEPPRPQEPH-RPQ 201
Query: 305 RTYR--TGPSP---HAP--PHQTLQPAPHTAALPAQDKSGRRLYQP 421
+R P P H P P +TL+ PH P + + RR +P
Sbjct: 202 EPHRPLEPPRPQEQHRPQEPPKTLE--PHRPQEPHRPQEPRRPLEP 245
Score = 31.5 bits (68), Expect = 0.76
Identities = 27/99 (27%), Positives = 37/99 (37%), Gaps = 4/99 (4%)
Frame = +2
Query: 77 SHPGLPKGEPNFAPYNYPPYRAYE--KIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQN 250
SH L P + P R E + ++PH P PP E++ + H Q
Sbjct: 173 SHRPLEPTRPQESHRPLEPPRPQEPHRPQEPHRPLEPPRPQEQHRPQEPPKTLEPHRPQE 232
Query: 251 HQYPSKPRNDPSPHYLPSRTYRTGPSPHAP--PHQTLQP 361
P +PR PH PH P PH+ L+P
Sbjct: 233 PHRPQEPRRPLEPH--------RQLEPHRPQEPHRPLEP 263
Score = 28.3 bits (60), Expect = 7.0
Identities = 30/115 (26%), Positives = 43/115 (37%), Gaps = 13/115 (11%)
Frame = +2
Query: 131 PYRAYEKIK--DPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPS 304
P+R E + +PH P PP E + ++ H Q P +P P + P
Sbjct: 83 PHRPQEPHRPLEPHRPLEPPRPQEPHRPQEPPRPQEPHRPQEPHRPLEPPR-PQEQHRPQ 141
Query: 305 RTYR----TGPS----PHAPPHQTLQPAP---HTAALPAQDKSGRRLYQPQPKPQ 436
+R T P P PP Q P H P + + R +P P+PQ
Sbjct: 142 EPHRPLEPTRPQESHRPLEPPRPQEQHRPLESHRPLEPTRPQESHRPLEP-PRPQ 195
>SB_20851| Best HMM Match : Cbl_N3 (HMM E-Value=0)
Length = 695
Score = 31.5 bits (68), Expect = 0.76
Identities = 31/92 (33%), Positives = 36/92 (39%), Gaps = 5/92 (5%)
Frame = +2
Query: 173 APPPLVSEKNTVIVKHDAKQIHLEQNHQYP-SKPRNDPS--PHYLPSRTYRTGP--SPHA 337
APPPL E+ + + L H P + P PS P P + RT P SP A
Sbjct: 300 APPPL-PERRMLNSTNTPTSPTLIVTHASPFASPGRSPSNSPRPSPKNSPRTSPRSSPFA 358
Query: 338 PPHQTLQPAPHTAALPAQDKSGRRLYQPQPKP 433
P T P PAQ S R P P P
Sbjct: 359 SP--TGSPTSSPVGSPAQSPSVFRRIPPPPLP 388
>SB_26944| Best HMM Match : Conotoxin (HMM E-Value=0.31)
Length = 217
Score = 31.1 bits (67), Expect = 1.00
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Frame = +2
Query: 161 PHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSK-PRNDPSPHYLPSRTYRTGPSPHA 337
PH+ AP P ++ + D + + + + PR DP +P P P
Sbjct: 96 PHV-APVPQEDPHVALVPREDPHVAPVPREDPHVALVPREDPPVTPVPREDPHVAPVPRE 154
Query: 338 PPHQTLQPA--PHTAALPAQ 391
PH L P PH A +P +
Sbjct: 155 DPHVALVPREDPHVALVPRE 174
Score = 29.5 bits (63), Expect = 3.0
Identities = 31/124 (25%), Positives = 42/124 (33%), Gaps = 14/124 (11%)
Frame = +2
Query: 65 DKNSSHPGLPKGEPNFAPY-NYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHD--AKQI 235
D P P+ AP P+ A +DPH+ AP P ++ + D +
Sbjct: 83 DARKPRPSGRPSHPHVAPVPQEDPHVALVPREDPHV-APVPREDPHVALVPREDPPVTPV 141
Query: 236 HLEQNHQYPSK---------PRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPA--PHTAAL 382
E H P PR DP +P P P PH P PH A +
Sbjct: 142 PREDPHVAPVPREDPHVALVPREDPHVALVPREGPHVAPVPREDPHVAPVPREDPHVAPV 201
Query: 383 PAQD 394
+D
Sbjct: 202 RQED 205
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Frame = +2
Query: 230 QIHLEQNHQYPSKPRND-PSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQD-KSG 403
Q+ +Q KPR + P P P T R P P +T P P T + +
Sbjct: 253 QVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTELPQPRTYRPETRTYRPD 312
Query: 404 RRLYQPQPK 430
R Y+P PK
Sbjct: 313 PRTYRPDPK 321
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +2
Query: 266 KPRND-PSPH-YLP-SRTYRTGPSPHAPPHQTLQPAPHTAALPAQDK 397
+PR + P P Y P +RTYR P + P +T QP P P +DK
Sbjct: 291 EPRTELPQPRTYRPETRTYRPDPRTYRPDPKTYQPWPQRTESP-EDK 336
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +2
Query: 269 PRNDPSPHYLPSRTYRTGPSP-HAP-PHQTLQPAPHTAALPAQDKSGRRL 412
P + P PH PS + GP P H P PH + P PH ++ P + GR L
Sbjct: 72 PTDGPGPH--PS--HGPGPHPSHGPGPHPSHGPGPHPSSGPGVNWFGRFL 117
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 30.7 bits (66), Expect = 1.3
Identities = 28/122 (22%), Positives = 44/122 (36%)
Frame = +2
Query: 71 NSSHPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQN 250
+S GL G+ + P P R E + + PL + V A + Q
Sbjct: 472 SSVKKGLQNGDIDSKPRPSPAVREAEMGRSRRDNSTSPLPRQTRRVSPTQ-AVRPSSTQG 530
Query: 251 HQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPK 430
P PS Y R RT P+ +PP + P+P + P+ + + P
Sbjct: 531 QSAPVGRTKSPSRSYTSPRQRRTSPNNRSPPPRRRSPSPRRPS-PSPRRRSTSPSRKSPP 589
Query: 431 PQ 436
P+
Sbjct: 590 PR 591
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 30.3 bits (65), Expect = 1.7
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 2/96 (2%)
Frame = +2
Query: 83 PGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNT-VIVKHDAKQIHLEQNHQY 259
PG+ P P PP ++ P P PPP N+ ++ H H+
Sbjct: 269 PGMGGMPPPGMPPPMPPGGMPPNMEQP--PPPPPSSGVSNSGMMPPHMQNPQHMGHQMMP 326
Query: 260 PSKPRNDPSPHYLPSRTYRTGPSP-HAPPHQTLQPA 364
P+ P P+ + T +T P P PP+Q L+ A
Sbjct: 327 GMMPQQFP-PNLMWGMTGQTRPPPPQMPPNQVLEEA 361
>SB_32532| Best HMM Match : RHS_repeat (HMM E-Value=3.2e-06)
Length = 618
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = +2
Query: 245 QNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQ 424
Q+ YPS +P P Y PS + G +P P P+ + + + + Y P
Sbjct: 537 QSRYYPS---GNPQPRYYPSGNHSPGITPSGNPQPRYYPSGNLQSRYYPSGNTQSRYYPS 593
Query: 425 PKPQ 436
PQ
Sbjct: 594 GNPQ 597
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 30.3 bits (65), Expect = 1.7
Identities = 33/123 (26%), Positives = 45/123 (36%), Gaps = 9/123 (7%)
Frame = +2
Query: 86 GLPKGEPNFAPYN-YPPYRAYEKIKDPHLPAP------PPLVSEKNTVIVKHDAKQIHLE 244
G P G P PY+ PP Y P +P P PP + + Q + +
Sbjct: 113 GYPTGPP--PPYSPIPPQVPYPGAAGPPMPHPTASVYPPPGGYPPTSYPPQPYPAQPYPQ 170
Query: 245 QNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPP-HQTLQPAPHTAALP-AQDKSGRRLYQ 418
Q + P+ P P Y P TGP P P + P H P A + + +Y
Sbjct: 171 QGYPPQPPPQAYPQPGYPPQGYPPTGPYPQTQPGYAGATPQAHYPQQPYAGAQPQQTVYV 230
Query: 419 PQP 427
QP
Sbjct: 231 QQP 233
>SB_51716| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +2
Query: 266 KPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKPQL 439
KP P P P+ T + PSP + Q L P+P T PA S R + + + + +L
Sbjct: 77 KPTRAPRPVARPATTLPSLPSPPSQAEQPLLPSPPTGT-PASVPSRRDIRKGKRRRRL 133
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/59 (32%), Positives = 24/59 (40%)
Frame = +2
Query: 257 YPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKP 433
Y S + P S + RT S H P + QPA LP+ +S P PKP
Sbjct: 2893 YHSVTQKSRLPSTTSSNSSRTS-SIHVPSFHSTQPANAPFTLPSTSRSFNTSSPPSPKP 2950
>SB_37047| Best HMM Match : Drf_FH1 (HMM E-Value=4.9)
Length = 233
Score = 29.9 bits (64), Expect = 2.3
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
Frame = +2
Query: 128 PPYRAYEKIKDPHLPAPPPLVSEKNTVIVKH-DAKQIHLEQNHQYPSKPRNDPSPHYLPS 304
PPYR K K P PPP++S T KH D + +KP P+ +P
Sbjct: 134 PPYRTTAKPKGP-TKKPPPMMSLTPTPKKKHYDTSALEELLGTPPTAKPTKAPNKKPVPK 192
Query: 305 RTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQP 421
+ P+P T + + G R +QP
Sbjct: 193 K-----PAPPPLRRSTRNTSQQQVGSGRKRVRGERAFQP 226
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.9 bits (64), Expect = 2.3
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 3/111 (2%)
Frame = +2
Query: 62 QDKNSSHPGLPKG--EPNFAPY-NYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQ 232
Q HP P + + P+ +P Y Y+ H P P P + A
Sbjct: 99 QKYREEHPSYPSSHIQASLLPHIQHPSYPTYK-----HPPFPHPTYKHPSYPSPHIQASL 153
Query: 233 IHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALP 385
+ L + P P P+ + TY P+PH ++ P PHT+ P
Sbjct: 154 LPLIPHTSIPPTPH--PTYKHPSYPTYNIPPTPHT----SIPPTPHTSIPP 198
Score = 27.9 bits (59), Expect = 9.3
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Frame = +2
Query: 104 PNFAPYNYPPYRA--YEKIKDPHLPAPP-PLVSEKNTVIVKHDAKQIHLEQNHQYPSKPR 274
P++ Y +P Y + + PH+ A PL+ NT I + +
Sbjct: 207 PSYPSYKHPSYPSSHIQASLLPHIQASLLPLIP--NTSIPPTPTPHTSIPPTPTPHTSIP 264
Query: 275 NDPSPHYL--PSRTYRTGPSPHAPPHQTLQPAPH 370
P+PH P+ T T P PH ++ P PH
Sbjct: 265 PTPTPHTSIPPTPTPHTSIPPTPTPHTSIPPTPH 298
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = +2
Query: 191 SEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPH------YLPSRTYRTGPSPHAPPHQ 349
SEK +V +K K+ E + YP PR PS Y SRT +TGP P+ H+
Sbjct: 466 SEKRSVEMKV-FKRTESEDDRGYPIGPRITPSDEADDQLRYDYSRTLQTGPMPYDSHHK 523
>SB_42356| Best HMM Match : PDZ (HMM E-Value=5.7e-19)
Length = 619
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = +2
Query: 236 HLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAP 367
H Q P++P + PH +P P P APP L P P
Sbjct: 46 HYHQPPPPPTRPSHSCGPHPVPPTPLVQHPEPEAPPQ--LPPPP 87
>SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28)
Length = 1006
Score = 29.5 bits (63), Expect = 3.0
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Frame = +2
Query: 29 SPHARLVSSKAQDKNSSHPGLPKGEPNFAPYNYPPY--RAYEKIKDPHLPAP--PPLVSE 196
SP S A+D N S+ + + ++P N P R + ++ L P P S
Sbjct: 389 SPETPHSPSIARD-NYSNNDVNSNDQRYSPRNLRPEIPREFYSSQNGKLDVPLRNPYASR 447
Query: 197 ---KNTVIVKHDAKQIHLEQNHQYPSKP-RNDPSPHYLPSRTYRTGPSPHAPPHQTLQPA 364
++ + + D +HL N S P RNDP + PSR + P H + +
Sbjct: 448 NGPRDPYVSRDDPIDLHLTDNDTKSSYPSRNDPRDSF-PSRNHSMDPYHHTNEPTVFRGS 506
Query: 365 P 367
P
Sbjct: 507 P 507
>SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)
Length = 605
Score = 29.5 bits (63), Expect = 3.0
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 209 IVKHDAKQIHLEQNHQYPSKPRNDPSP-HYLPSRTY-RTGPSPHAPPHQTLQPAPHTA-- 376
++ H K Q ++P KPR DP+P P+ Y RT P P + T P P A
Sbjct: 330 LILHGTKDKPAHQQKEHPDKPR-DPAPVPPSPNLGYSRTEKVPGGPTY-TFGPPPPAASN 387
Query: 377 ALPAQ 391
A PAQ
Sbjct: 388 AKPAQ 392
>SB_27871| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 816
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 5/85 (5%)
Frame = +2
Query: 146 EKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGP 325
+++ DP A + +++ +QI P+KP P P + S T P
Sbjct: 439 KRVTDPKCTAILKAERKMKHRVLEKAVEQIKANPRKPKPAKPTLLPLPG-INSHQDNTSP 497
Query: 326 SPHAPPHQTLQPA-----PHTAALP 385
P +P H PA PH +P
Sbjct: 498 PPTSPAHHVTSPARKMMPPHKMTIP 522
>SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)
Length = 524
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/76 (25%), Positives = 27/76 (35%)
Frame = +2
Query: 173 APPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQT 352
APPP+ K K +Q E + +P +P P P P P P
Sbjct: 230 APPPVPQTKRKPPAKLPPRQPVAEPEPE--RQPEPEPEPEQEPEPEPEPEPEPEPEPEPE 287
Query: 353 LQPAPHTAALPAQDKS 400
+P P +P + S
Sbjct: 288 PEPEPEPVHVPEPEIS 303
>SB_8802| Best HMM Match : WW (HMM E-Value=3.2e-31)
Length = 662
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/97 (26%), Positives = 36/97 (37%), Gaps = 3/97 (3%)
Frame = +2
Query: 122 NYPPYRAYEKIKDPHLPAPP-PLVSE--KNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPH 292
N PP ++ P P P P E +N + +Q H +Q Q KP P H
Sbjct: 135 NQPPTEQNQQGGQPVNPQPQCPGAGEDNRNNQTSQTHQEQSHQQQQQQDQQKPDMQPPEH 194
Query: 293 YLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSG 403
++ P HQ Q P + L Q +SG
Sbjct: 195 ATQPQSLPDQQQQQHPGHQQ-QQHPGQSLLGQQPQSG 230
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 29.1 bits (62), Expect = 4.0
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 13/141 (9%)
Frame = +2
Query: 53 SKAQDKNSSHPGLPKGEPNFAPYN--YPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDA 226
S Q P P + + P+ P + + H P P ++ + D
Sbjct: 369 SSQQQPKQFQPQFPTSQHSQQPFQSGQAPQQFQQPFPTEHQPQQPFRPGQQCQYSTRSDQ 428
Query: 227 KQ---IHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPS------PHAPPHQTLQP--APHT 373
+ Q HQ P +P P P + +R P P QP +P
Sbjct: 429 QTQSTFQPGQKHQQPFRPEQPFQPGLQPRQPFRPDQQSQQAFRPEQQPQLPFQPGQSPQQ 488
Query: 374 AALPAQDKSGRRLYQPQPKPQ 436
LP D+ ++ ++P+ +PQ
Sbjct: 489 PFLP--DQQSQKPFRPEQQPQ 507
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/79 (21%), Positives = 30/79 (37%)
Frame = +2
Query: 125 YPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPS 304
+ P + +++ P P P L + + + EQ Q P +P P +LP
Sbjct: 434 FQPGQKHQQPFRPEQPFQPGLQPRQPFRPDQQSQQAFRPEQQPQLPFQPGQSPQQPFLPD 493
Query: 305 RTYRTGPSPHAPPHQTLQP 361
+ + P P Q +P
Sbjct: 494 QQSQKPFRPEQQPQQPFRP 512
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 29.1 bits (62), Expect = 4.0
Identities = 31/124 (25%), Positives = 43/124 (34%), Gaps = 7/124 (5%)
Frame = +2
Query: 92 PKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNT----VIVKHDAKQIHLEQNHQY 259
P PN A N P PHL P ++ K A +I + +
Sbjct: 934 PTEHPNQAKMNNPATDKKSPNPRPHLTRLTPNTQTSRDSALEIVTKQSATEIECDPDVAM 993
Query: 260 P-SKPRNDPSPHYLPSRTYRTGPSPHAP--PHQTLQPAPHTAALPAQDKSGRRLYQPQPK 430
+ R++ S + GPS P L PAP A + D S +PQP
Sbjct: 994 RLATLRSEASFENTLNNQANAGPSEETSSNPKSYLVPAPRKAKPTSDDVSNSVGQRPQPL 1053
Query: 431 PQLQ 442
P+ Q
Sbjct: 1054 PRRQ 1057
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +2
Query: 89 LPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSK 268
+P+G P P PP + Y++ P + P++ + +++ + + Q P
Sbjct: 453 MPQGPPPPPP---PPPQMYQQ---PLMMPQAPMMMPQAPMMMPQAPMTMQQQAQMQQPCA 506
Query: 269 PRNDPSPHYLPS--RTYRTGPSPHAPPHQTLQPAPHTAALPA 388
P +P Y PS +Y P P +PP +PAP + PA
Sbjct: 507 P--SCAPTYSPSCCGSY-PAPQPPSPPAPPPKPAPPPRSPPA 545
>SB_27977| Best HMM Match : ARID (HMM E-Value=1.6e-26)
Length = 1536
Score = 29.1 bits (62), Expect = 4.0
Identities = 27/90 (30%), Positives = 33/90 (36%), Gaps = 7/90 (7%)
Frame = +2
Query: 92 PKGEPNFAPYNYPPYR--AYEKIKDPHLPAPPPLVSEKNTVIVKHDA-KQIHLEQNHQ-- 256
P PN YN PPY E+ P P+ S NT A Q+ ++N Q
Sbjct: 552 PPQLPNMGGYNMPPYNMMGNERSSYPGYPS-QSFQSAPNTQFTGAAALSQLAYQRNQQAM 610
Query: 257 --YPSKPRNDPSPHYLPSRTYRTGPSPHAP 340
YP P PS H + P P P
Sbjct: 611 QGYPGMPPRRPS-HMGQQAPMMSSPGPQDP 639
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/72 (29%), Positives = 28/72 (38%)
Frame = +2
Query: 221 DAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKS 400
+ +Q H EQ + R P+ T P HA P Q P P A+ P Q K
Sbjct: 1031 ERQQFHQEQLRAAELRARASHMSPSTPTSTVHNAPQAHAVPQQPGTPQP--ASQP-QQKP 1087
Query: 401 GRRLYQPQPKPQ 436
+ QP + Q
Sbjct: 1088 SPTIQQPPQQGQ 1099
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 260 PSKPRNDPSPHYLPSRTYRTGPSPHAPP-HQTLQPAPHTAALPAQDKSGRR 409
P P N P P P+ GP P PP + P P T P++ K GR+
Sbjct: 377 PPPPTNGPPPPPPPTN----GPPPPPPPTNGPPPPPPPTNGPPSEGKCGRK 423
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 23.8 bits (49), Expect(2) = 5.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 122 NYPPYRAYEKIKDPHLPAPPP 184
NYP A +K ++P PPP
Sbjct: 106 NYPLMNAVKKYLGGYVPPPPP 126
Score = 23.4 bits (48), Expect(2) = 5.2
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +2
Query: 299 PSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSG 403
P T GP PP P P T A P +G
Sbjct: 133 PPVTPPPGPETPPPPDTPAPPVPPTEAPPTAPPTG 167
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +2
Query: 260 PSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKPQL 439
P P P P P + P P PP Q A P+ +G QP P QL
Sbjct: 688 PPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSPAGSPSGTSAGNPQQQPPPPGQL 747
>SB_53865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 28.7 bits (61), Expect = 5.3
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 218 HDAKQIHLEQNHQYPS--KPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPH 370
H+ H +Q P PR P PH P YR P P+ PP +P P+
Sbjct: 261 HEGDPYHGGPFNQAPPGFPPRWGPPPHMPPD--YRGFPPPNFPPPDFSRPPPN 311
>SB_15833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 775
Score = 28.7 bits (61), Expect = 5.3
Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 13/109 (11%)
Frame = +2
Query: 80 HPGLPKGEPNFAPYNY---PPYRA---YEKIKDPHLPA----PPPLVSEKNTVIVKHDAK 229
HP G N A N PP+R+ ++ ++ +L P + +++ A
Sbjct: 628 HPEADDGSSNLADVNLETGPPHRSSIVFDIDENDYLARLARFSSPYPKDVKDRAMQYLAS 687
Query: 230 QIHLEQNHQYPSKPRNDPSP---HYLPSRTYRTGPSPHAPPHQTLQPAP 367
+ +Q HQ+ K N P P H + GP P P P P
Sbjct: 688 RRQQQQQHQHQDKNNNPPQPSAHHQCQHDKHSCGPHPVPPTPLVQHPEP 736
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 260 PSKPRNDPSPHYLPSRTYRTGPSPHAPPH-QTLQPAPHTAALPAQDKSGRRLYQPQPKPQ 436
P N P P PSR P PH PP Q+ P P T + + Y P+
Sbjct: 70 PPHQSNTPRPLTPPSR-QSNNPRPHTPPSCQSNTPRPLTPPPRQSNTTQPPAYPPRQSYA 128
Query: 437 LQR 445
LQ+
Sbjct: 129 LQQ 131
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +2
Query: 224 AKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTL---QPAPHTAALPAQD 394
++Q + + H PS N P P P R T P PP Q+ Q P + P +
Sbjct: 84 SRQSNNPRPHTPPSCQSNTPRPLTPPPRQSNTTQPPAYPPRQSYALQQTTPLHTSQPLRP 143
Query: 395 KSGRRLYQPQP 427
R PQP
Sbjct: 144 TPRRPSDTPQP 154
>SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)
Length = 279
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 263 SKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPA 388
S ++ P P L S+T + P P + Q+L P P +++ P+
Sbjct: 90 SSSQSLPPPPSLSSQTSSSSPPPSSSSSQSLPPPPSSSSQPS 131
>SB_13937| Best HMM Match : zf-CCCH (HMM E-Value=0.0017)
Length = 1495
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 242 EQNHQYPSKP-RNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQ 418
+ + P++P + D + P++T++ P++ P+Q + ++++ P Q +
Sbjct: 322 QSSSSQPNQPWKQDQNSSSQPNQTWKQDQDPNSQPNQPWKQGQNSSSQPNQPWKQGQNSS 381
Query: 419 PQP-KPQLQ 442
PQP KP Q
Sbjct: 382 PQPNKPWKQ 390
>SB_12550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 191 SEKNTVIVKHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSP 331
S+ ++K A Q+ ++QN + SK R+ + H S PSP
Sbjct: 707 SQHTRELIKTSATQVRIDQNKRNTSKKRSKQAQHKRYSVLIAENPSP 753
>SB_58287| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 77 SHPGLPKGEPNFAPYNYPPYRA 142
SHPG P+ E +F+ NY Y +
Sbjct: 926 SHPGAPRSESSFSSRNYEVYES 947
>SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +2
Query: 281 PSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQP 427
P PH P R P P + QP P + LPA+ G P+P
Sbjct: 225 PHPHPPPPRVV---PLPVVVQEEQEQPRPRKSVLPARVADGTEATPPRP 270
>SB_38313| Best HMM Match : XYPPX (HMM E-Value=0.069)
Length = 135
Score = 28.3 bits (60), Expect = 7.0
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 80 HPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPP 184
+P P G P Y YPP Y + + PPP
Sbjct: 37 YPPAPGGYPPSGGYGYPPAGGYPPPQPGYAGGPPP 71
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 242 EQNHQYP-SKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQ 418
+ N +P S+ + P HY + SP APP +P LP+Q S R +
Sbjct: 2126 QANMMHPNSQAQQPPGQHYQAKQMQPRLMSPQAPPPM----SPQQGGLPSQ--SPRPVMS 2179
Query: 419 PQP 427
PQP
Sbjct: 2180 PQP 2182
>SB_25799| Best HMM Match : DUF618 (HMM E-Value=2e-26)
Length = 687
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 83 PGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPP 184
PG P EP P+ P YE + PH P PP
Sbjct: 364 PGRPPHEPGRPPHE-PGRPPYEPGRPPHEPGRPP 396
>SB_40769| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 308 TYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQPQPKP 433
T T SP P H PAP T ++ + YQP P+P
Sbjct: 2 TLDTTTSPKNPKHHYQPPAPRTLDTTTSPQNPKHHYQP-PEP 42
>SB_40368| Best HMM Match : SASP_gamma (HMM E-Value=2.3)
Length = 325
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/70 (25%), Positives = 24/70 (34%)
Frame = +2
Query: 224 AKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSG 403
A++ H P +PRN P P + R P H PH ++L
Sbjct: 240 AEKPHRSSRETPPVQPRNPTCPAEKPHLSSRETPPVQPRNHTCPAEKPHLSSLETPPVQP 299
Query: 404 RRLYQPQPKP 433
R P KP
Sbjct: 300 RNPTSPAGKP 309
Score = 27.9 bits (59), Expect = 9.3
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Frame = +2
Query: 2 PFHPQXDYCSPHARLVSSKAQDKNSSHPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPP 181
P +P PH S + +P P +P+ + PP + ++P PA
Sbjct: 211 PRNPTGPAEKPHQ--YSRETPPVQPRNPTGPAEKPHRSSRETPPVQP----RNPTCPAEK 264
Query: 182 PLVSEKNTVIVK---HD--AKQIHLEQNHQYPSKPRNDPSPHYLPSRTYR 316
P +S + T V+ H A++ HL P +PRN SP P + R
Sbjct: 265 PHLSSRETPPVQPRNHTCPAEKPHLSSLETPPVQPRNPTSPAGKPYHSSR 314
>SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45)
Length = 622
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Frame = +2
Query: 50 SSKAQDKNSSHPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAK 229
++ + ++ SS +G + + + P R I + P + +N +
Sbjct: 249 NTHSTNRTSSTSADDRGLSSSEHFPWLPNRYQTSISQTNSSISPAISRTQNPASPMPPRR 308
Query: 230 QIHLEQNHQYPSKPRNDP-SPH-YLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSG 403
++ QN QYP+ P P PH Y+ S + + P P + P + P+ + G
Sbjct: 309 PSYMGQNIQYPTTPPQQPGQPHPYMMSPSMK--PMPQTQQYYNNMGMPPSMMGPSHNPMG 366
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +2
Query: 83 PGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPP 184
PG P EP P+ P YE + PH P PP
Sbjct: 130 PGRPPHEPGRPPHE-PGRPPYEPGRPPHEPGRPP 162
>SB_11627| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=2.6)
Length = 496
Score = 28.3 bits (60), Expect = 7.0
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 6/109 (5%)
Frame = +2
Query: 80 HPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPP---PLVSEKNTVIVKHDAKQIHLEQN 250
+P P P P P Y + + P+PP P + ++ + +
Sbjct: 264 YPPSPLRYPPIPPRYPPSLIRYPTLPPRYPPSPPRYPPSPPRYPPSLHRYPQSPLRYPPS 323
Query: 251 H-QYPSKP-RNDPSPHYLPSRTYRTGPS-PHAPPHQTLQPAPHTAALPA 388
+YP P R PSP PS R PS P PP P+ H P+
Sbjct: 324 PIRYPPLPSRYPPSPPRYPSSHPRYPPSPPRYPPSPPRYPSSHPRYPPS 372
Score = 28.3 bits (60), Expect = 7.0
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 6/89 (6%)
Frame = +2
Query: 83 PGLPKGEPNF--APYNYPP-YRAYEKIKDPHLPAP---PPLVSEKNTVIVKHDAKQIHLE 244
P P P + +P YPP Y + + P+P PPL S ++ +
Sbjct: 290 PRYPPSPPRYPPSPPRYPPSLHRYPQSPLRYPPSPIRYPPLPSRYPPSPPRYPSSHPRYP 349
Query: 245 QNHQYPSKPRNDPSPHYLPSRTYRTGPSP 331
PS PR PSP PS R PSP
Sbjct: 350 -----PSPPRYPPSPPRYPSSHPRYPPSP 373
>SB_8007| Best HMM Match : HisKA_3 (HMM E-Value=4.2)
Length = 178
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +2
Query: 218 HDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGP--SPHAPPHQTLQPAPHTAALPAQ 391
H A Q+ E P P N P S+T P S PP + P A L A+
Sbjct: 83 HPANQVKSE-----PRVPHNSKRPLLPLSQTDSRVPLSSNTVPPAENTDPITRLADLLAE 137
Query: 392 DKSGRRLYQPQPK 430
S RL P+PK
Sbjct: 138 RNSCHRLPLPEPK 150
>SB_28910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/65 (29%), Positives = 23/65 (35%)
Frame = +2
Query: 242 EQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQDKSGRRLYQP 421
EQN + S+P D Y + + H P P A P Q S QP
Sbjct: 280 EQNKEVDSRPSED----YDKPWEWMARKTQHMSMASPAIPKPQNTATPKQQNSSNPKPQP 335
Query: 422 QPKPQ 436
KPQ
Sbjct: 336 YAKPQ 340
>SB_27955| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 27.9 bits (59), Expect = 9.3
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +2
Query: 215 KHDAKQIHLEQNHQYPSKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQD 394
+ KQIH H P+ P + S++ P + P H TL+PA PAQ
Sbjct: 326 RQQQKQIHQSLGHTI--LPQATGQPTQIISKSQSEHPRHNQPMHVTLKPAQG----PAQ- 378
Query: 395 KSGRRLYQPQ-PKPQLQ 442
YQP P P LQ
Sbjct: 379 -----FYQPSPPHPSLQ 390
>SB_12780| Best HMM Match : SAC3_GANP (HMM E-Value=3.7e-07)
Length = 436
Score = 27.9 bits (59), Expect = 9.3
Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Frame = +2
Query: 263 SKPRNDPSPHYLPSRTYRTGPSPHAP---PHQTLQPA-PHTAALPAQDKSGRRLYQPQPK 430
SKP + P P Y PS P AP PH T T +L + PQP
Sbjct: 107 SKP-SLPYPGYTPSNQLAGTTRPSAPATIPHSTTNTDNSSTTSLSPNSNIRHQFRPPQPH 165
Query: 431 PQLQ 442
PQ++
Sbjct: 166 PQVR 169
>SB_5433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1554
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +2
Query: 23 YCSPHARLVSSKAQDKNSSHPGLP-KGEPNFAPYNYPPYRAYEKIKDPH--LPAPPPLVS 193
+ P ++ + K SS+PGLP + + Y P Y I P+ LP P P +
Sbjct: 138 WMKPKSKSSKATKSPKTSSYPGLPFSPQMPYTGYPQVPASPYTSILTPYGMLPYPVPQAA 197
Query: 194 E 196
+
Sbjct: 198 Q 198
>SB_2073| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 27.9 bits (59), Expect = 9.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 122 NYPPYRAYEKIKDPHLPAPPPLVSEKNTVI 211
N YR Y P +P PPPL + N ++
Sbjct: 327 NLDTYREYRIRTSPLIPLPPPLYAALNNIL 356
>SB_46953| Best HMM Match : DUF1014 (HMM E-Value=0.83)
Length = 284
Score = 27.9 bits (59), Expect = 9.3
Identities = 26/91 (28%), Positives = 36/91 (39%)
Frame = +2
Query: 68 KNSSHPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQ 247
+ SHPGL N P +R ++ DP PPP SEK+ +DA H
Sbjct: 204 RKHSHPGLQMP-------NSPTHRGGDR--DPPTTPPPPPPSEKDAY---YDAFSRHYSF 251
Query: 248 NHQYPSKPRNDPSPHYLPSRTYRTGPSPHAP 340
+ ++ S H + T T P H P
Sbjct: 252 SAKHSSNKAKHQRAH--KAITPSTSPKKHVP 280
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 263 SKPRNDPSPHYLPSRTYRTGPSPHAPPHQTLQPAPHTAALPAQ 391
++P +P P+ T P+P P Q PAP A AQ
Sbjct: 714 AQPTQAQNPAPTPAPTQAQNPAPTPAPTQAQNPAPTPAPTQAQ 756
>SB_30679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Frame = +2
Query: 143 YEKIKDPHLPAPPPLVSEKNTVIVKHDAKQIHLEQNHQYPSK--PRNDPSP-HYLPSRTY 313
Y +++ L P + +T+ D H+ Q S P D +P HY P +T
Sbjct: 41 YTQLQTTTLNPVPHYRQQSSTLYPTTDNNPQHIPNYRQQHSTLYPTTDNNPQHYTPLQTT 100
Query: 314 RTGPSPHAPPHQTLQPAPHT 373
PH T P P +
Sbjct: 101 TLNTIPHYKQRTTKSPFPES 120
>SB_13709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +2
Query: 41 RLVSSKAQDKNSSHPGLPKGEPNFAPYNYPPYRAYEKIKDPHLPAPPPLVSEKNTVIVKH 220
+ SS+ +D+N P P++ PP R H+P +++ + H
Sbjct: 72 KTTSSQGRDENGFGRDFPPASGGAVPWSRPPARFNFFFSSVHIPGCNNHIADSLSRFCYH 131
Query: 221 DAKQIHL-EQNHQYPSKPRNDPSP 289
+ +++ L + H P P +P
Sbjct: 132 EFRRVALYAECHPNPIPPPTASAP 155
>SB_7402| Best HMM Match : Extensin_2 (HMM E-Value=2)
Length = 267
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 257 YPSKPRNDPSPHYLPSRTYRTGPS 328
Y S P P+P Y P+ +Y + PS
Sbjct: 239 YTSNPSYTPTPSYTPTTSYTSNPS 262
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,256,137
Number of Sequences: 59808
Number of extensions: 435755
Number of successful extensions: 1748
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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