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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte10a06
         (752 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07)                 99   4e-21
SB_30461| Best HMM Match : zf-C2H2 (HMM E-Value=0.064)                 64   1e-10
SB_17140| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.33 
SB_53564| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.57 
SB_32949| Best HMM Match : SAP (HMM E-Value=1)                         30   2.3  
SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0)                     29   4.1  
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)                     29   4.1  
SB_10202| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_23756| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_18156| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_12335| Best HMM Match : Pou (HMM E-Value=0)                         28   9.4  
SB_12095| Best HMM Match : Vicilin_N (HMM E-Value=0.083)               28   9.4  
SB_52352| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.4  
SB_9476| Best HMM Match : RuvB_N (HMM E-Value=0.35)                    28   9.4  

>SB_19705| Best HMM Match : zf-C2H2 (HMM E-Value=6e-07)
          Length = 503

 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 58/122 (47%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
 Frame = +1

Query: 361 KHRLAGTEAEPFINKLRKTTATPSTTKVN----KGKQLNSNWRQKHEEFIQAIRAAKQVQ 528
           + R   T AE  I K   TT  P+  K      +G    S  R   EEFI+AIR AK+V 
Sbjct: 357 QRRFNPTVAERHIPKCANTTNRPAPPKQRAIPLEGSTGMSGGRMT-EEFIRAIRDAKKVS 415

Query: 529 AHLNAGGKLSDLXXXXXSENPDYVQCPHCNRRFNQGAAERHIPKCANFQFNKPKPAAKRR 708
            H+ +GGK+SDL     SENPDYV C +C RRFN   AERHIPKCAN   N+P P  +R 
Sbjct: 416 QHIASGGKVSDLPPPQYSENPDYVLCRYCQRRFNPTVAERHIPKCAN-TTNRPAPPKQRA 474

Query: 709 *P 714
            P
Sbjct: 475 IP 476



 Score = 96.3 bits (229), Expect = 2e-20
 Identities = 60/159 (37%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
 Frame = +1

Query: 259 CGVCGRHFASDRIAKHQEICK-KAHSKKRKPFDVLKHRLAGT--EAEPFINKLRKTTATP 429
           C  CGR F  +R+  H   C+ K  +   +P       +  +  +A    N  R     P
Sbjct: 231 CNNCGRTFLPERLEVHMRSCRPKTRTMPVRPGIQGSPNMQNSYGDANNNTNPRRIPPGYP 290

Query: 430 S----TTKVNKGKQLNSNWRQKHEEFIQAIRAAKQVQAHLNAGGKLSDLXXXXXSENPDY 597
                T      +  +S    + +EFI+AIR AK+V  HL +GGK+SDL     SEN DY
Sbjct: 291 KEKTFTFDERSRRTPSSGGSSQGQEFIRAIRDAKKVSQHLASGGKVSDLPPPQYSENADY 350

Query: 598 VQCPHCNRRFNQGAAERHIPKCANFQFNKPKPAAKRR*P 714
           V C +C RRFN   AERHIPKCAN   N+P P  +R  P
Sbjct: 351 VLCRYCQRRFNPTVAERHIPKCAN-TTNRPAPPKQRAIP 388



 Score = 28.7 bits (61), Expect = 5.4
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = +1

Query: 259 CGVCGRHFASDRIAKHQEICKKAH-SKKRKPFD 354
           C  CGR F  DR+  HQ  C   +  K  K FD
Sbjct: 90  CEFCGRTFNPDRLGIHQRSCNPDNPHKPSKNFD 122


>SB_30461| Best HMM Match : zf-C2H2 (HMM E-Value=0.064)
          Length = 197

 Score = 64.1 bits (149), Expect = 1e-10
 Identities = 24/47 (51%), Positives = 35/47 (74%)
 Frame = +1

Query: 259 CGVCGRHFASDRIAKHQEICKKAHSKKRKPFDVLKHRLAGTEAEPFI 399
           C +CGR+F +DR+ KHQ++C K  ++KRK FD+ K R AGTE E ++
Sbjct: 134 CSICGRNFQTDRLEKHQKVCAKNSTRKRKAFDMTKQRTAGTEHEKYV 180


>SB_17140| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1236

 Score = 32.7 bits (71), Expect = 0.33
 Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +3

Query: 579 VGESGLRAVSSLQSQVQPG-RCRATHSEVRKLSVQQTEAGR*TT 707
           V ++  + VS++Q  VQ   RC+AT + VRKLSV  T A +  T
Sbjct: 679 VNDTSTQGVSTVQGLVQSQPRCQATLNPVRKLSVSATSAQKKNT 722


>SB_53564| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 233

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 589 PDYVQCPHCNRRFNQGAAERHIPKCANFQFNKPKP 693
           P +V   HCNR+  Q    +HIP+C +F   + +P
Sbjct: 96  PHFVNRNHCNRQIRQ-IQHKHIPQCTSFPTWRRRP 129


>SB_32949| Best HMM Match : SAP (HMM E-Value=1)
          Length = 269

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
 Frame = +1

Query: 409 RKTTATPSTTKVNKGKQ--LNSNWRQKHEEFIQAIRAAKQVQAHLNAGGKLSDLXXXXXS 582
           RK+  TPS T   K K+  ++S+   K  E I  I+   +  A                +
Sbjct: 77  RKSRTTPSVTPGRKRKRRIIDSDDEDKTFEAI-TIKQEPECAADSTKKTPKGKQPRKSPT 135

Query: 583 ENPDYVQCPHCNRRFNQGAAERHIPKC 663
             PD+ +CP C     Q     H+  C
Sbjct: 136 RPPDFAECPVCGELILQSKVNSHLDLC 162


>SB_42365| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 791

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
 Frame = +1

Query: 64  KYSGHRILCLT*VSETNKTRGAMQRPANTT-PRKPPVKANSAGSGTPKGR 210
           +Y+GH+ + LT     NK+  A + PA T+ PR PP +A + GS    G+
Sbjct: 554 RYTGHKDIKLT----LNKS--ASKAPARTSAPRSPPRQAEAIGSSRDVGK 597


>SB_16622| Best HMM Match : zf-C2H2 (HMM E-Value=0)
          Length = 1239

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 553  LSDLXXXXXSENPDYVQCPHCNRRFNQ-GAAERHI 654
            L+D       E P   QCPHC++ F Q G   RH+
Sbjct: 1185 LTDHLRTHTGERP--FQCPHCSKTFRQSGVMNRHV 1217


>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
          Length = 935

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +1

Query: 580 SENPDYVQCPHCNRRFNQGA-AERHIPK 660
           + NPD  +CP C + F+ G+   +H+ K
Sbjct: 139 THNPDGFKCPECGKNFSSGSNLRKHVRK 166


>SB_10202| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1165

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 10/60 (16%)
 Frame = +1

Query: 259 CGVCGRHFASDRIAKHQEICKK----AHSKKR------KPFDVLKHRLAGTEAEPFINKL 408
           C +CG     D++  H  I  K    AH+K        K F V+ H L+G ++  FI  L
Sbjct: 455 CNICGGELGEDKVLDHCHITGKYRGAAHNKCNLQFRIPKFFPVIFHNLSGYDSHLFIKNL 514


>SB_23756| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 550

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -3

Query: 720 ISWLSSFSGRLRFVELKVCALRNVSLGSALVE 625
           ISWL+    RL+ VELK C   +V     L+E
Sbjct: 503 ISWLAETFPRLKHVELKQCPAVSVKSEEILIE 534


>SB_18156| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 704

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
 Frame = +1

Query: 259 CGVCGRHFASDRIAKHQEICKK---AHSKKRK 345
           C +CGR + S  I+ H++ C+K   AH  K++
Sbjct: 654 CYICGRAYGSASISIHEKQCQKKWEAHEAKKE 685


>SB_19201| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1095

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = +1

Query: 343 KPFDVLKHRLAGTEAEPFINKLRKTTATPSTTKVNKGKQLNSNWRQKHEEFI--QAIRAA 516
           KP D L     G   E     L   +A  ++  +NKGKQ  ++ R   + F   + +RA 
Sbjct: 742 KPLDDLSSTSPGAMVERHARALTAVSAYGASVALNKGKQRPASARPSFQAFTDNKPVRAT 801

Query: 517 KQVQAHLN 540
           +   A ++
Sbjct: 802 RPFSAKIS 809


>SB_12335| Best HMM Match : Pou (HMM E-Value=0)
          Length = 401

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = +2

Query: 341 GNPLMYSNIVWLERKQNPLSINCAKPPLLRQLLK*TKASN*TATGDKNTKSSSRQYERRN 520
           GN L  + I   E  Q  L   C   PLL++ L+ T AS+    G+K    S+  +   N
Sbjct: 255 GNVLSQTTICRFEALQLSLKNMCKLKPLLQKWLQETDASSSGHEGEKQQNPSNFAFATHN 314


>SB_12095| Best HMM Match : Vicilin_N (HMM E-Value=0.083)
          Length = 501

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = +1

Query: 307 QEICKKAHSKKRKPFDVLKHRLAGTEAEPFINKLRKTTATP---STTKVNKGKQLNSNWR 477
           +++CKK    + +  ++ +   A  EAE  + + R+        +   V + ++  ++W+
Sbjct: 285 KDLCKKVQENRAEQEELRRRLKALQEAEQALEEERQCRTKMQERAEQSVERAREEMTDWK 344

Query: 478 QKHEEFIQAIRAAKQVQAHLNAG-GKLSD 561
           ++ EE     RAA  V      G  KL D
Sbjct: 345 RQIEELSGCCRAALTVMYQFQEGSAKLID 373


>SB_52352| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 645

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 5/56 (8%)
 Frame = -1

Query: 485 CFCRQLLFNCLP-----LFTLVVDGVAVVLRNLLIKGSASVPAKRCLSTSKGFLFL 333
           C C   L NC       + TL+ DGV  V   +  K +ASV          G+LFL
Sbjct: 570 CVCADGLINCTIFSLSYVVTLIADGVRSVRNFVFDKTAASVLTSCVCECGDGYLFL 625


>SB_9476| Best HMM Match : RuvB_N (HMM E-Value=0.35)
          Length = 848

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 259 CGVCGRHFASDRIAKHQEICKKA 327
           C VCG+ F+  +I  H E C KA
Sbjct: 149 CPVCGKSFSPKQINSHVEDCLKA 171


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,856,791
Number of Sequences: 59808
Number of extensions: 379710
Number of successful extensions: 1330
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1327
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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