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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10b08
         (614 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_21513| Best HMM Match : Extensin_2 (HMM E-Value=4)                  36   0.034
SB_11163| Best HMM Match : DUF1104 (HMM E-Value=1.7)                   33   0.14 
SB_12369| Best HMM Match : S-antigen (HMM E-Value=0.11)                33   0.14 
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.18 
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.24 
SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)         31   0.56 
SB_37509| Best HMM Match : PAE (HMM E-Value=0)                         30   1.3  
SB_11869| Best HMM Match : Excalibur (HMM E-Value=8)                   30   1.3  
SB_59641| Best HMM Match : PAE (HMM E-Value=0)                         30   1.3  
SB_46590| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_40793| Best HMM Match : Toxin_30 (HMM E-Value=9.6)                  30   1.7  
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_52975| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.3  
SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)                29   2.3  
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.0  
SB_51094| Best HMM Match : VWA (HMM E-Value=0)                         29   4.0  
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)                    29   4.0  
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.9  
SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)                      28   6.9  
SB_30682| Best HMM Match : Formyl_trans_N (HMM E-Value=2.8e-08)        28   6.9  
SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027)                    28   6.9  
SB_56913| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.9  
SB_41627| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)            27   9.1  
SB_23364| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  
SB_24271| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.1  
SB_7214| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.1  

>SB_21513| Best HMM Match : Extensin_2 (HMM E-Value=4)
          Length = 484

 Score = 35.5 bits (78), Expect = 0.034
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
 Frame = +1

Query: 211 ASVNFLPATAASQKHETAFPS--PFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEG 384
           ASV+  P   A Q H+ +  +     A +PH+ +V+   Q  AP  +  +V  +TAP + 
Sbjct: 335 ASVSTAPQVTAPQPHKASVSTAPQVTAPHPHKASVSTAPQVTAPQPHKASV--STAP-QV 391

Query: 385 TSPYPYALPVSAFP 426
           T+P P+   VS  P
Sbjct: 392 TAPQPHKASVSTAP 405


>SB_11163| Best HMM Match : DUF1104 (HMM E-Value=1.7)
          Length = 282

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +1

Query: 148 TGDLYVAATEEDGVKSQW-LTDASVNFLPATAASQKHETAFPSPFAASYPHEETVNKKKQ 324
           T  L  AA +ED    Q  LTDA VN     A     ++  P  F A   HE    K+K+
Sbjct: 194 TSSLLKAAKDEDFKAFQSDLTDAVVNTAKPVARKVAEQSGLPDSFGAGLQHERPAQKEKE 253


>SB_12369| Best HMM Match : S-antigen (HMM E-Value=0.11)
          Length = 1123

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +1

Query: 148 TGDLYVAATEEDGVKSQW-LTDASVNFLPATAASQKHETAFPSPFAASYPHEETVNKKKQ 324
           T  L  AA +ED    Q  LTDA VN     A     ++  P  F A   HE    K+K+
Sbjct: 194 TSSLLKAAKDEDFKAFQSDLTDAVVNTAKPVARKVAEQSGLPDSFGAGLQHERPAQKEKE 253


>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3142

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 28/100 (28%), Positives = 49/100 (49%)
 Frame = +1

Query: 205  TDASVNFLPATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEG 384
            TD+S + +  T  S+   T   +    S  H  + +  + A AP    + +P T+     
Sbjct: 2889 TDSSYHSV--TQKSRLPSTTSSNSSRTSSIHVPSFHSTQPANAP----FTLPSTSRSFNT 2942

Query: 385  TSPYPYALPVSAFPSQASESLIPCLDPAKANIPQYSPFHF 504
            +SP P   P+S++ S++S  + P LDP+  + P+ S  HF
Sbjct: 2943 SSP-PSPKPLSSYFSRSSTDIPPLLDPSLPS-PKLSSSHF 2980


>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1850

 Score = 32.7 bits (71), Expect = 0.24
 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = +1

Query: 262  AFPSPFAAS-YPHEETVNKKKQAGAPV--QYAYAVPMTT-APNEGTSPYPYALPVSAFPS 429
            A P+P  AS YP ++      Q G P   Q   A P    AP      YP A P +A+P+
Sbjct: 1259 AAPAPAPASAYPSQDAAY---QTGYPAYQQGGQAYPSAAPAPAPAAQAYPSAAPATAYPT 1315

Query: 430  QASESLIPCLDPAKANIPQYSP 495
            QA  +  P   PA A  P  +P
Sbjct: 1316 QAPAN--PTAAPATA-YPAQAP 1334


>SB_6033| Best HMM Match : RNA_pol_Rpb1_R (HMM E-Value=1.6e-37)
          Length = 1052

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 37/133 (27%), Positives = 49/133 (36%), Gaps = 4/133 (3%)
 Frame = +1

Query: 226  LPATAASQKHETAFPS--PFAASY-PHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPY 396
            L   AAS  +  A PS  P + SY P   + +    + +P   +Y+     A    TS  
Sbjct: 652  LHTLAASPSYSPASPSYTPASPSYTPTSPSYSPASPSYSPTSPSYS----PASPSYTSAS 707

Query: 397  PYALPVSAFPSQASESLIPCLDPAKANIPQYSPFHFFYPQMMSAYT-KSMSILKEAGVNE 573
            P   P S   S  S S  P +       P YSP    Y     +YT  S S    +    
Sbjct: 708  PSYSPASPSYSPTSPSYSPAIPSNSPASPSYSPASPSYTPASPSYTPASPSYTPASPSYT 767

Query: 574  DTANSVMPTPPMW 612
             T  S  PT P +
Sbjct: 768  PTIPSYSPTSPSY 780



 Score = 29.9 bits (64), Expect = 1.7
 Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 9/184 (4%)
 Frame = +1

Query: 16   TMLKVL-SILIVIYSCVQGHVTQRNDPNQLHP-VHGLYIKPSVDGSTGDLYVAATEEDGV 189
            T+L  L ++L  +Y+ +    T     + L P +H L   PS   ++   Y  A+     
Sbjct: 619  TVLPALHTVLSALYTLLPALHTVLPALHTLLPALHTLAASPSYSPASPS-YTPASPSYTP 677

Query: 190  KSQWLTDASVNFLPATA----ASQKHETAFPS--PFAASY-PHEETVNKKKQAGAPVQYA 348
             S   + AS ++ P +     AS  + +A PS  P + SY P   + +    + +P   +
Sbjct: 678  TSPSYSPASPSYSPTSPSYSPASPSYTSASPSYSPASPSYSPTSPSYSPAIPSNSPASPS 737

Query: 349  YAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIPQYSPFHFFYPQMMSA 528
            Y+     A    T   P   P S   + AS S  P +       P YSP    Y     +
Sbjct: 738  YS----PASPSYTPASPSYTPASPSYTPASPSYTPTIPSYSPTSPSYSPTSPSYSPASPS 793

Query: 529  YTKS 540
            YT +
Sbjct: 794  YTSA 797


>SB_37509| Best HMM Match : PAE (HMM E-Value=0)
          Length = 483

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 6/29 (20%)
 Frame = +1

Query: 64  QGHVTQRNDPNQLHP------VHGLYIKP 132
           +GHV++R+ PN+ HP      +HG+Y KP
Sbjct: 363 RGHVSRRSLPNKPHPSWAYRHIHGIYCKP 391


>SB_11869| Best HMM Match : Excalibur (HMM E-Value=8)
          Length = 269

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
 Frame = +1

Query: 238 AASQKHETAFPSPFAASYPHEETVNK------KKQAGAPVQYAYAVPMTTAPNEGTSPYP 399
           AAS   ET   SP+ AS P EE  ++      K++  AP   A A     A  EGTS   
Sbjct: 115 AASPSDETTTDSPWDASAPTEEAPSRDEAAAPKQEEEAPKDEAAASEEVAAATEGTSAAT 174

Query: 400 YALPVSAFPSQASES 444
                SA  ++  +S
Sbjct: 175 ETNDASAEVNETDKS 189


>SB_59641| Best HMM Match : PAE (HMM E-Value=0)
          Length = 1252

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 6/29 (20%)
 Frame = +1

Query: 64   QGHVTQRNDPNQLHP------VHGLYIKP 132
            +GHV++R+ PN+ HP      +HG+Y KP
Sbjct: 1132 RGHVSRRSLPNKPHPSWAYRHIHGIYCKP 1160


>SB_46590| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 972

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 31/127 (24%), Positives = 46/127 (36%)
 Frame = +1

Query: 226 LPATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYA 405
           L A  A  +   +  S  AA   +  T+ +    G P QY Y +P  T P     P  + 
Sbjct: 572 LDADVAYHEESVSVASSSAAIPMYGSTMAQASLPGQPGQYQYVIP--TQPG---IPSQF- 625

Query: 406 LPVSAFPSQASESLIPCLDPAKANIPQYSPFHFFYPQMMSAYTKSMSILKEAGVNEDTAN 585
                 P QA   ++P   P +  +P Y P +   P     Y     + K+        +
Sbjct: 626 ----LSPGQAPHMVLPPGSPVQ-QVPGYQPAYLHTP-----YQPQYGLNKDVATLSHARS 675

Query: 586 SVMPTPP 606
              PTPP
Sbjct: 676 HTPPTPP 682


>SB_40793| Best HMM Match : Toxin_30 (HMM E-Value=9.6)
          Length = 217

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
 Frame = +1

Query: 265 FPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASES 444
           F SP+ +S P   T ++     +P  ++   P+          +   +P+   P    E 
Sbjct: 17  FVSPWDSS-PESFTSDQLSPKYSPSPFSSKAPLPVFVEFTPGDFIAPVPIRCRPVPVGEP 75

Query: 445 LI-----PCLDPAKANIPQYSPFHFF 507
           LI      C DP  + IP   P HFF
Sbjct: 76  LIFASVDDCADPEPSLIPLMDPVHFF 101


>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1077

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 260 VSCFCEAAVAGKKLTDASVNHCDLTPSSSVAAT 162
           + C C+A   G  +T   VN C L  S  V AT
Sbjct: 502 IKCMCKAGYTGDGITCEDVNECQLPGSCHVHAT 534


>SB_52975| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1077

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = +1

Query: 115 GLYIKPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHETAFPSPFAASYP 294
           G   +   DG+  D   A T+E G  SQWL D    +   T A+     A  + + A+  
Sbjct: 385 GKLYRSGQDGAAIDR--AFTDETGYDSQWLPDDHPAYQEYTEATHSMGGAIGNVWRAAQV 442

Query: 295 HEETVNKKKQAGA 333
             +  N K+  GA
Sbjct: 443 ESKVWNSKENLGA 455


>SB_4617| Best HMM Match : Extensin_2 (HMM E-Value=0.38)
          Length = 450

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
 Frame = +1

Query: 163 VAATEEDGVKSQW---LTDASVNFLPATAASQKHETA-FPSPFA-ASYPHEETVNKKKQA 327
           +AA+++  +++Q    L     +  PA +  Q H +   PSP    +  H  +V+++  A
Sbjct: 111 IAASQQQQLRAQQQAALAAQQAHSQPAVSLPQPHPSPQMPSPAQLGAQSHPGSVSQQMHA 170

Query: 328 GAP-VQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIPQYSPFHF 504
               +QY  +  +  AP     P P + PV+  P       IP   PA  N+   SP  F
Sbjct: 171 AQTRMQYVQSPAVMRAPTPAPHPSPASQPVAPSP-----VCIPVQSPA-PNMMSPSPQQF 224


>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1706

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 20/91 (21%), Positives = 36/91 (39%)
 Frame = +1

Query: 211  ASVNFLPATAASQKHETAFPSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTS 390
            A V  +P  ++        P+P +    +    N   Q+ A ++ A  VP  T P+  T+
Sbjct: 1259 AGVKQVPIHSSPDILARVLPAPTSTPLMNVSIANPSNQSLANIKPALGVPAITVPHSNTA 1318

Query: 391  PYPYALPVSAFPSQASESLIPCLDPAKANIP 483
              P    V++ P   + +L+    P     P
Sbjct: 1319 SKPLTKTVTS-PLLPNSNLLVNTSPVSQTHP 1348


>SB_51094| Best HMM Match : VWA (HMM E-Value=0)
          Length = 3544

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 16   TMLKVLSILIVIYSCVQGHVTQRNDPNQLHPVHGLYIKPSVDGSTGDLYVAATE 177
            T +  LS+ + +Y CV GH T       LH +  +    ++  ST  L   AT+
Sbjct: 1688 TPVDALSLRVAVYGCVSGHYTP-----DLHMMLAISATSTIPASTFSLMSTATQ 1736


>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
          Length = 1328

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +2

Query: 104  IQYMDSISSLRSTDLRETFTLPRQKKMESNRNG*PMHPSTSYQPQQLHRN 253
            I+ MDS S+L    LR+TF L R+K   ++ N   M  + S +   L RN
Sbjct: 905  IRSMDSSSTLEDNMLRKTFPLKRRKMSRASLNQ-KMLTNASVRVIDLSRN 953


>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1333

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 103 HPVHGLYIKPSVDGSTGDLYVAATEEDGVK 192
           H + G++  P + G   D+  A  EEDGVK
Sbjct: 365 HEIVGVFTVPDIKGKP-DILAAGAEEDGVK 393


>SB_36169| Best HMM Match : DUF676 (HMM E-Value=0)
          Length = 2442

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 7/115 (6%)
 Frame = +1

Query: 127  KPSVDGSTGDLYVAATEEDGVKSQWLTDASVNFLPATAASQKHET-AFPSPFAASYPHEE 303
            KP + G+T    V++   D  K      A++ FL   A++    T +  SP   S   + 
Sbjct: 2012 KPKIGGATIKFGVSSETSDASKPSVADAAALGFLKVPASTPPDTTPSASSPADTSSSSKP 2071

Query: 304  TVNKKKQAGAPVQYAYAVPMTTAPNE------GTSPYPYALPVSAFPSQASESLI 450
            ++    +AG        +P    P E       T P P+A    A  +    S I
Sbjct: 2072 SIGDAAKAGFLKIPTAGLPKAEVPKETSTSTTTTQPLPFAFGTGAATTTDDNSAI 2126


>SB_30682| Best HMM Match : Formyl_trans_N (HMM E-Value=2.8e-08)
          Length = 146

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 103 HPVHGLYIKPSVDGSTGDLYVAATEEDGVK 192
           H + G++  P + G   D+  A  EEDGVK
Sbjct: 49  HEIVGVFTVPDIKGKP-DILAAGAEEDGVK 77


>SB_7281| Best HMM Match : TSP_1 (HMM E-Value=0.027)
          Length = 406

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 20/66 (30%), Positives = 30/66 (45%)
 Frame = +1

Query: 331 APVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESLIPCLDPAKANIPQYSPFHFFY 510
           AP  Y Y+  + + P+   + YP + P S +P+    S  P   P   + P  SP+   Y
Sbjct: 54  APPPYQYSAYLASYPSSYPASYPASYPAS-YPASYPAS-YPASYP--TSYPYPSPYPAPY 109

Query: 511 PQMMSA 528
           P   SA
Sbjct: 110 PATYSA 115


>SB_56913| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1603

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
 Frame = +1

Query: 121 YIKPSVDGSTGDL-YVAATEEDGVKSQWLT 207
           +++ S+   TG + Y+ +TE  GVK+ WLT
Sbjct: 837 WLELSLPSKTGRVNYIFSTENPGVKADWLT 866


>SB_41627| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 188

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 388 SPYPYALPVSAFPSQASESLIPCLDPAKANIPQYSPFH 501
           +P+P  +  S+FPS   ++ +P     + N+P Y+  H
Sbjct: 31  TPHPAHISNSSFPSALLKTDVPINSLCEPNLPVYTDIH 68


>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
          Length = 1439

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 21/72 (29%), Positives = 27/72 (37%)
 Frame = +1

Query: 268 PSPFAASYPHEETVNKKKQAGAPVQYAYAVPMTTAPNEGTSPYPYALPVSAFPSQASESL 447
           P+P AA  P          +G P   A   P   AP+ G  P P A P  +  + +S   
Sbjct: 393 PTPVAAPPPAPPPSVFAPSSGVPTPVAAPPPSVFAPSSGV-PTPVAAPPPSVFASSSGVP 451

Query: 448 IPCLDPAKANIP 483
            P   P  A  P
Sbjct: 452 TPVTAPPPAPPP 463


>SB_23364| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 184

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +1

Query: 31  LSILIVIYSCVQGHVTQRNDPNQLHPVHGLYIKPSVDGSTGDLYV 165
           +S+ +++Y+  Q      + PN +HP+    ++P   GS  +L V
Sbjct: 43  ISLRLIVYAFDQ---LPLSTPNIIHPISSFQVRPETGGSDWELLV 84


>SB_24271| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +1

Query: 232 ATAASQKHETAFPSPFAASYPHEETVNKKKQAGAP-VQYAYAVPMTTAPNEGTSPYPYAL 408
           A A S       P   + S P E T  +K  A  P VQ  Y     + P   +  +P+A 
Sbjct: 43  ARALSNSPRRGSPQTQSPSPPAEYTGFQK--AFTPYVQSNYPQHFISPPPRYSDMFPFAS 100

Query: 409 PVSAFPSQASESL 447
           P+S   S +SESL
Sbjct: 101 PLSTGSSSSSESL 113


>SB_7214| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 505

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
 Frame = +2

Query: 218 STSYQPQQLHRNTKLHFRAPSLQ--AIXXXXXXXXXXXXEPRSSTHMRCQ*QQH-QMKAP 388
           ST +   +LH     H R PS+Q   I                 TH+R    QH  ++ P
Sbjct: 157 STQHTHIRLHLTQHSHIRLPSIQHSRIRLPSIQHSHIRLPSTQHTHIRLPLTQHTHIRLP 216

Query: 389 HLIHTLYRSVRFRHKH 436
              HT  R    +H H
Sbjct: 217 STQHTHIRLPSTQHSH 232


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.313    0.127    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,492,372
Number of Sequences: 59808
Number of extensions: 461477
Number of successful extensions: 1003
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)

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