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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov10a19
         (627 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)        175   2e-44
SB_40010| Best HMM Match : No HMM Matches (HMM E-Value=.)              58   4e-09
SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)               33   0.19 
SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30)                 31   1.0  
SB_1050| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   1.0  
SB_49554| Best HMM Match : DNA_gyraseA_C (HMM E-Value=7)               29   2.3  
SB_17599| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_23500| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_42363| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.1  
SB_7938| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.1  
SB_52819| Best HMM Match : E-MAP-115 (HMM E-Value=0.82)                28   5.4  
SB_44616| Best HMM Match : rve (HMM E-Value=0.012)                     28   5.4  
SB_36341| Best HMM Match : DUF329 (HMM E-Value=1.7)                    28   5.4  
SB_18512| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.4  
SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.1  
SB_22208| Best HMM Match : PAAR_motif (HMM E-Value=0.005)              28   7.1  
SB_46518| Best HMM Match : VWA (HMM E-Value=1.6e-07)                   28   7.1  
SB_2838| Best HMM Match : DUF436 (HMM E-Value=3.5)                     28   7.1  
SB_29064| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.4  

>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
          Length = 741

 Score =  175 bits (427), Expect = 2e-44
 Identities = 78/137 (56%), Positives = 104/137 (75%)
 Frame = +1

Query: 13  GSCVKQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR 192
           GSC+     MK I+A++ V IPD + V VKSR+VTV GPRG LKRNF+HL +++  V   
Sbjct: 548 GSCLSCIVAMKTILASETVTIPDNVEVKVKSRVVTVTGPRGTLKRNFRHLRLELTKVGKD 607

Query: 193 LLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIE 372
            ++V+ WF S+KELA V+T+ +H+ENMIKGV  G++YKMRAVYAHFPIN    E  +++E
Sbjct: 608 KVRVDVWFASRKELACVKTIITHIENMIKGVIYGYRYKMRAVYAHFPINIAIQENGTLVE 667

Query: 373 IRNFLGEKYIRRVKMAP 423
           +RNFLGEKY+RRV+M P
Sbjct: 668 VRNFLGEKYVRRVRMRP 684


>SB_40010| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 34

 Score = 58.4 bits (135), Expect = 4e-09
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = +1

Query: 508 ALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 597
           ALIQQST VKNKDIRKFLDG+YVSEKTT+V
Sbjct: 2   ALIQQSTKVKNKDIRKFLDGVYVSEKTTIV 31


>SB_12264| Best HMM Match : Filament (HMM E-Value=0.0075)
          Length = 762

 Score = 33.1 bits (72), Expect = 0.19
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
 Frame = +1

Query: 355 GNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQ--KDELIIEGNSLEDVSSSAALIQQST 528
           G  ++ +++ LG++    +      T +       K+EL    +SLE+VS   A +Q S 
Sbjct: 196 GREVVRLKDELGKQASNELSFIAKTTELEDQLVLLKEELNSRVSSLENVSKQLAELQSSA 255

Query: 529 TVKNKDIRKFLDGLYVSEK 585
             K+++I      L V+EK
Sbjct: 256 LTKDEEISSLTKRLQVTEK 274


>SB_41075| Best HMM Match : RVT_1 (HMM E-Value=2.1e-30)
          Length = 1152

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +1

Query: 394 KYIRRVKMAPGVTVVNSPKQKDELIIE-GNSLEDVSSSAALIQQSTTVKNKDIRKFLDGL 570
           K   R ++A G+   ++P Q + LI   G   EDV S+ +L +  +      + KF DG 
Sbjct: 25  KRFERFRIASGLDKKDAPSQINALIYTMGERAEDVLSTFSLTEAESKDYKVVVEKF-DGH 83

Query: 571 YVSEKTTV 594
           +V ++ T+
Sbjct: 84  FVKKRNTI 91



 Score = 27.9 bits (59), Expect = 7.1
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 97   VKSRLVTVKGPRGVLKRNFKHL 162
            V++R  TV  PRG L+RN +HL
Sbjct: 1069 VETRSYTVSTPRGELRRNRRHL 1090


>SB_1050| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 674

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -2

Query: 560 KNFLISLFLTVVDCWMRAAELETSSKELPSMISSSFCFGELTTV 429
           K+F+  +   +VDCW+ +   E S+  LPS   S   F  +TTV
Sbjct: 298 KDFIGRIVPLLVDCWIESNPAEMST-SLPSSSISPVAFSTMTTV 340


>SB_49554| Best HMM Match : DNA_gyraseA_C (HMM E-Value=7)
          Length = 535

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 30/134 (22%), Positives = 52/134 (38%)
 Frame = +1

Query: 187 PRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSI 366
           P   K   W   K    A+      +E  I   TK  Q K   +Y     N    E  ++
Sbjct: 215 PGFRKKSSWCPEKGREIAIEAYAKALEEKILSSTK--QGK---IYR----NLTQDERRAL 265

Query: 367 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 546
            ++R +  +  I+      GV V++  K   E + + +  E    +  L Q  T + N+ 
Sbjct: 266 KDLR-YAKDIVIKEADKGSGVVVMDKDKYNQEALRQLSDKEVYKETKDLTQYITELVNRR 324

Query: 547 IRKFLDGLYVSEKT 588
           +RK     ++ +KT
Sbjct: 325 VRKLSSDGFIDDKT 338


>SB_17599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 803

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 30/134 (22%), Positives = 54/134 (40%)
 Frame = +1

Query: 187 PRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSI 366
           P   K   W   K    A+      +E  I   TK  Q K   +Y+    N    E  ++
Sbjct: 444 PAFRKKSSWCPEKGREIAIEAYAKALEEEILSSTK--QGK---IYS----NLTQDERRAL 494

Query: 367 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 546
            ++R +  +  I+      GV V++  K   E++ + +  E    +  L Q  T + N+ 
Sbjct: 495 KDLR-YAKDIVIKEADKGSGVVVMDKDKYIQEVLRQLSDKEVYKETKDLTQYITELVNRR 553

Query: 547 IRKFLDGLYVSEKT 588
           +RK     ++ +KT
Sbjct: 554 VRKLSADGFIDDKT 567



 Score = 27.9 bits (59), Expect = 7.1
 Identities = 28/134 (20%), Positives = 50/134 (37%)
 Frame = +1

Query: 187 PRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSI 366
           P   K   W   K    A+      +E  I   TK        +Y     N    E  ++
Sbjct: 205 PAFRKKSSWCPEKGREIAIEAYAKALEEEILSSTK-----QGTIYG----NLTQDERRAL 255

Query: 367 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 546
            ++R +  +  I+      GV V++  K   E + + +  E    +  L Q  T + N+ 
Sbjct: 256 KDLR-YAKDIVIKEADKGSGVVVMDKDKYIQEALRQLSDKEVYKETKDLTQYITELVNRR 314

Query: 547 IRKFLDGLYVSEKT 588
           +RK     ++ +KT
Sbjct: 315 VRKLSADGFIDDKT 328


>SB_23500| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 586

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 30/134 (22%), Positives = 53/134 (39%)
 Frame = +1

Query: 187 PRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSI 366
           P   K   W   K    A+      +E  I   TK  Q K   +Y+    N    E  ++
Sbjct: 123 PAFRKKSSWCPEKSREIAIEAYAKALEEEILSSTK--QGK---IYS----NLTQDERQAL 173

Query: 367 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 546
            ++R +  +  I+      GV V++  K   E + + +  E    +  L Q  T + N+ 
Sbjct: 174 KDLR-YTKDIVIKEADKGSGVVVMDKDKYIQEALRQLSDKEVYKETKDLTQYITELVNRR 232

Query: 547 IRKFLDGLYVSEKT 588
           +RK     ++ +KT
Sbjct: 233 VRKLSADGFIDDKT 246


>SB_42363| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 218

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 201 LQETRVYHANVNSQVFEVPFENSAGPFNCHQ 109
           L  TR+ +  V+S   EV  E S  P++CHQ
Sbjct: 160 LYNTRIPNVTVSSDGGEVELEISDDPYDCHQ 190


>SB_7938| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 203

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 254 QTVLTAASSFLDPNHFSTFRRRGFTMRMSTAKCLKFLLRTPRGPLTVT 111
           QT++T A  F D       RRR F+  +S   C + L R+P  P++ T
Sbjct: 85  QTMITTA--FPDTRKSPLTRRRNFSDGVSDLSCTENLARSPCAPVSPT 130


>SB_52819| Best HMM Match : E-MAP-115 (HMM E-Value=0.82)
          Length = 883

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 22  VKQSPNMKQIVANQKVKIPDGLTVHVKSRLVTVKGPRG 135
           ++ +  +K++  + K K  DG+ VH K+   TV+ PRG
Sbjct: 98  LQNAKRIKKLEEDLKKKTCDGVLVHRKAVAATVEEPRG 135


>SB_44616| Best HMM Match : rve (HMM E-Value=0.012)
          Length = 1189

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = +1

Query: 70  KIPDGLTVHVKSRLVTVKGPRG---VLKRNFKHL-AVDIRMVNPRLLKV 204
           K+ DGL VH+ ++ V  K P+    + KR  + L A+ I + +P + KV
Sbjct: 4   KLDDGLRVHIVTQYVLFKNPKKLEIIAKRQKETLEALQINLDHPHVAKV 52


>SB_36341| Best HMM Match : DUF329 (HMM E-Value=1.7)
          Length = 197

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 7/44 (15%)
 Frame = -1

Query: 192 TRVYHANVNSQVFEVP-------FENSAGPFNCHQTRFHMDRKP 82
           TR YH NV   VF V        F  S G  N HQ  +  DR+P
Sbjct: 57  TRSYHENVVRPVFGVSDYWYRYEFAKSRGQINRHQLSWREDRQP 100


>SB_18512| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 551

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 30/134 (22%), Positives = 53/134 (39%)
 Frame = +1

Query: 187 PRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSI 366
           P   K   W   K    A+      +E  I   TK  Q K   +Y+    N    E  ++
Sbjct: 57  PAFRKKSSWCPEKGREIAIEAYAKALEEEILSSTK--QGK---IYS----NLTQDERRAL 107

Query: 367 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 546
            ++R +  +  I+      GV V++  K   E + + +  E    +  L Q  T + N+ 
Sbjct: 108 KDLR-YAKDIVIKEADKGSGVVVMDKDKYIQEALRQLSDKEVYKETKDLTQYITELVNRR 166

Query: 547 IRKFLDGLYVSEKT 588
           +RK     ++ +KT
Sbjct: 167 VRKLSADGFIDDKT 180


>SB_36215| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1427

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 54   SKSESQNPRRAYGPCEIASGDS*RAPRS--SQKELQTL 161
            S+ ++    R Y PC I SG++  APR    +KE++ L
Sbjct: 1363 SEDDTTTGARRYRPCPIESGNTYEAPRQVVMEKEVEEL 1400


>SB_22208| Best HMM Match : PAAR_motif (HMM E-Value=0.005)
          Length = 316

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +1

Query: 457 DELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKT-TVVLDD 606
           D  ++EG+ +  V S AA++++   V N      +DG  V+    +++LDD
Sbjct: 169 DAAVVEGDKVVVVDSDAAVVERDKVVVNDSDAAVVDGDEVAVVAWSLILDD 219


>SB_46518| Best HMM Match : VWA (HMM E-Value=1.6e-07)
          Length = 309

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -2

Query: 479 LPSMISSSFCFGELTTVTPGAIFTLLMYFSPKKLRISIIE 360
           +P  I S    G+L  +T G I T      PKKL   +IE
Sbjct: 218 IPIAIGSKVNLGQLNILTAGPIITANTSGDPKKLANQVIE 257


>SB_2838| Best HMM Match : DUF436 (HMM E-Value=3.5)
          Length = 422

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 30/134 (22%), Positives = 53/134 (39%)
 Frame = +1

Query: 187 PRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSI 366
           P   K   W   K    A+      +E  I   TK  Q K   +Y+    N    E  ++
Sbjct: 107 PAFRKKSSWCPEKGREIAIEAYAKALEEEILSSTK--QGK---IYS----NLTQDERRAL 157

Query: 367 IEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKD 546
            ++R +  +  I+      GV V++  K   E + + +  E    +  L Q  T + N+ 
Sbjct: 158 KDLR-YAKDIVIKEADKGSGVVVMDKGKYIQEALRQLSDKEVYKETKDLTQYITELVNRR 216

Query: 547 IRKFLDGLYVSEKT 588
           +RK     ++ +KT
Sbjct: 217 VRKLSADGFIDDKT 230


>SB_29064| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 324

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -2

Query: 509 AAELETSSKELPSMISSSFCFGELTTVTPGAIFTLLMYFSPKKLRISIIEL 357
           AAE++TS   L  + S S C      VT   IFT  MY  P+++ ++   L
Sbjct: 234 AAEVKTSRIFLLVINSFSICLAPFMIVTFIEIFTGTMYTVPRQVYLATTNL 284


>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2834

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
 Frame = +1

Query: 223  KKELAAVRTVCSHVENMIKGVTKGFQY-KMRAVYAHFPI--NCVTTEGNSIIE-IRNFLG 390
            K+ LAA + V +   N+ KGVT+G    K R V    PI    V T+G  + + +    G
Sbjct: 948  KRALAAAKVVKTERVNVAKGVTQGMPVTKGRVVTQGMPITPGRVVTQGKVVTQGMPVTPG 1007

Query: 391  EKYIRRVKMAPGVTVVNS-PKQKDELIIEG 477
                + + + PG  V    P  +  ++ +G
Sbjct: 1008 RVVTQGIPVTPGRIVTQGIPVTQGRVVTQG 1037


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,911,223
Number of Sequences: 59808
Number of extensions: 414893
Number of successful extensions: 1089
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1088
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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