Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov10a14
(627 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 61 6e-10
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 57 1e-08
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 56 2e-08
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 55 5e-08
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 55 5e-08
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 55 5e-08
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 49 4e-06
SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05) 47 1e-05
SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_27055| Best HMM Match : PWI (HMM E-Value=3.5e-08) 31 0.77
SB_14926| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 5.4
SB_40817| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.6e-36) 28 7.1
SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39) 28 7.1
SB_6412| Best HMM Match : Extensin_2 (HMM E-Value=8.1) 28 7.1
SB_5980| Best HMM Match : Stig1 (HMM E-Value=1.4) 28 7.1
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 61.3 bits (142), Expect = 6e-10
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Frame = +2
Query: 233 QATSPIEDSHGIEGVYSDSEIKVDGKKVEVH-LDVQNFTPEQIQVKTVGNEIMIEGKKEI 409
QAT+ +E + +++G KVE+ LDV+N+ PE+I +K I I+GK +
Sbjct: 13 QATTRLEQLGETRNCSLAANTEMEGDKVEIATLDVKNYRPEEISLKVEHGRIKIDGKHKS 72
Query: 410 KREDGWTRSHFERRFLLPEGFPPERVECHL-DKGKLKLIAFRAEPLQERAVPIQEKSVNS 586
+ E G+ S F R + LP+G V + G L + A +AEP QE V + S S
Sbjct: 73 EGEHGYETSEFHRSYNLPDGVDVSTVSSRITGDGLLHIEALKAEP-QETEVSLVGASTGS 131
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Frame = +2
Query: 311 KVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFPPERVE 490
K + +DV+ F PE I+V+ +GNE+++ E++ E + HF R+F+LP + +
Sbjct: 98 KFSMAMDVKGFPPEAIKVQVLGNELLVSANHEVEHEGHYHAMHFNRQFILPREVDMDSLT 157
Query: 491 CHLDK-GKLKLIAFRAEPLQERAV-PIQEKSVNSEQT 595
LDK GKL F A+ A+ P++E V ++T
Sbjct: 158 TRLDKEGKLH---FEAKKRNAPALPPVRELKVLRDKT 191
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 311 KVEV-HLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFPPERV 487
K+E+ LDV+ + PE+I K + ++G+ + G+ F R F LPEG V
Sbjct: 7 KLEIAKLDVREYRPEEISFKVENGVVKVQGRHVNEGPFGFELKEFRRTFTLPEGVEASNV 66
Query: 488 ECHL-DKGKLKLIAFRAEP 541
+ + + G+L + A +A P
Sbjct: 67 KTRISNHGQLHIEAMKALP 85
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = +2
Query: 248 IEDSHGIEGVYSDSEIKVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGW 427
IE + G E K + +DV F P+ I+V+ +GNE+++ E++ E +
Sbjct: 77 IEAMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHY 136
Query: 428 TRSHFERRFLLPEGFPPERVECHLDK-GKLKLIAFRAEPLQERAV-PIQEKSVNSE 589
HF R+F+LP + + LDK GKL F A+ A+ P++E ++ E
Sbjct: 137 HAMHFNRQFVLPREVDMDSLTTRLDKEGKLH---FEAKKRNAPALPPVRELKLDEE 189
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +2
Query: 248 IEDSHGIEGVYSDSEIKVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGW 427
IE + G E K + +DV F P+ I+V+ +GNE+++ E++ E +
Sbjct: 311 IEAMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHY 370
Query: 428 TRSHFERRFLLPEGFPPERVECHLDK-GKLKLIAFRAEPLQERAVP 562
HF R+F+LP + + LDK GKL F A+ A+P
Sbjct: 371 HAMHFNRQFVLPREVDMDSLTTRLDKEGKLH---FEAKKRNAPALP 413
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 311 KVEV-HLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFPPERV 487
K+E+ LDV+ + PE+I K + ++G+ + G+ F R F LPEG V
Sbjct: 6 KLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFELKEFRRTFTLPEGVEASNV 65
Query: 488 ECHL-DKGKLKLIAFRAEP 541
+ + + G+L + A +A P
Sbjct: 66 KTRISNHGQLHIEAMKALP 84
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 326 LDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFPPERVECHL-D 502
LDV+ + PE+I K + ++G+ + G+ F R F LPEG V+ + +
Sbjct: 246 LDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFELKEFRRTFTLPEGVEASNVKTRISN 305
Query: 503 KGKLKLIAFRAEP 541
G+L + A +A P
Sbjct: 306 HGQLHIEAMKALP 318
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +2
Query: 248 IEDSHGIEGVYSDSEIKVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGW 427
IE + G E K + +DV F P+ I+V+ +GNE+++ E++ E +
Sbjct: 77 IEAMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHY 136
Query: 428 TRSHFERRFLLPEGFPPERVECHLDK-GKLKLIAFRAEPLQERAVP 562
HF R+F+LP + + LDK GKL F A+ A+P
Sbjct: 137 HAMHFNRQFVLPREVDMDSLTTRLDKEGKLH---FEAKKRNAPALP 179
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 311 KVEV-HLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFPPERV 487
K+E+ LDV+ + PE+I K + ++G+ + G+ F R F LPEG V
Sbjct: 6 KLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFELKEFRRTFTLPEGVEASNV 65
Query: 488 ECHL-DKGKLKLIAFRAEP 541
+ + + G+L + A +A P
Sbjct: 66 KTRISNHGQLHIEAMKALP 84
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +2
Query: 296 KVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFP 475
K K + +DV F PE I+V+ +GNE+++ E++ E + HF R+F+LP
Sbjct: 92 KAKEDKFSMAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGHYHAMHFNRQFVLPREVD 151
Query: 476 PERVECHLDK-GKL 514
+ + LDK GKL
Sbjct: 152 MDSLTTRLDKEGKL 165
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +2
Query: 326 LDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFPPERVECHL-D 502
LDV+ + PE+I K + ++G+ + E G+ F R F LPEG PE V + +
Sbjct: 12 LDVKEYRPEEISFKVENGVVKVQGRHVNEGEFGFELKEFRRTFTLPEGIDPENVTSRISN 71
Query: 503 KGKLKLIAFRAEPLQE 550
G L + A +A P E
Sbjct: 72 HGHLHIEARKALPKPE 87
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +2
Query: 248 IEDSHGIEGVYSDSEIKVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGW 427
IE + G E K + +DV F P+ I+V+ +GNE+++ E++ E +
Sbjct: 77 IEAMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHY 136
Query: 428 TRSHFERRFLLPEGFPPERVECHLDK-GKLKLIAFRAEPLQERAVP 562
HF R+F+LP + + LDK GKL F A+ A+P
Sbjct: 137 HAMHFNRQFVLPREVDMDSLTTRLDKEGKLH---FEAKKRNAPALP 179
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 311 KVEV-HLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFPPERV 487
K+E+ LDV+ + PE+I K + ++G+ + G+ F R F LPEG V
Sbjct: 6 KLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFELKEFRRTFALPEGVEASNV 65
Query: 488 ECHL-DKGKLKLIAFRAEP 541
+ + + G+L + A +A P
Sbjct: 66 KTRISNHGQLHIEAMKALP 84
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 54.8 bits (126), Expect = 5e-08
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +2
Query: 248 IEDSHGIEGVYSDSEIKVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGW 427
IE + G E K + +DV F P+ I+V+ +GNE+++ E++ E +
Sbjct: 77 IEAMKALPGPDGGEEESKGDDKFSMAMDVTGFPPDSIKVQVLGNELLVSANHEVEHEGHY 136
Query: 428 TRSHFERRFLLPEGFPPERVECHLDK-GKLKLIAFRAEPLQERAVP 562
HF R+F+LP + + LDK GKL F A+ A+P
Sbjct: 137 HAMHFNRQFVLPREVDMDSLTTRLDKEGKLH---FEAKKRNAPALP 179
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 311 KVEV-HLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFPPERV 487
K+E+ LDV+ + PE+I K + ++G+ + G+ F R F LPEG V
Sbjct: 6 KLEIAKLDVREYRPEEISFKVENGFVKVQGRHVNEGPFGFELKEFRRTFALPEGVEASNV 65
Query: 488 ECHL-DKGKLKLIAFRAEP 541
+ + + G+L + A +A P
Sbjct: 66 KTRISNHGQLHIEAMKALP 84
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/90 (26%), Positives = 45/90 (50%)
Frame = +2
Query: 302 DGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFPPE 481
D K + LDV +F PE++ VK G+E+ + ++E + +T F R F+LP +
Sbjct: 96 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQECEEHGFFTARQFNRHFVLPREVDMD 155
Query: 482 RVECHLDKGKLKLIAFRAEPLQERAVPIQE 571
+ L K + I PL++ + +++
Sbjct: 156 TLVPRLGKDGVLYIEADKRPLRQLDIVMEK 185
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 299 VDGKKVEVH-LDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPEGFP 475
+D K ++ LDV+ F PE+I K +I + G + + E+G+ F R + LPEG
Sbjct: 1 MDADKFQIATLDVREFKPEEITCKVENGKIKVSGLQRHESEEGFDSKEFRRCYNLPEGVD 60
Query: 476 PERVECHL-DKGKLKLIAFRAEP 541
+ + + G L + A + P
Sbjct: 61 ESSISTRIAEDGMLHVEALKKSP 83
>SB_58907| Best HMM Match : HSP20 (HMM E-Value=4.2e-05)
Length = 259
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = +2
Query: 302 DGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRFLLPE 466
D K + LDV +F PE++ VK G+E+ + ++E + +T F R F+LP+
Sbjct: 24 DDTKFTLALDVSDFKPEEVDVKVYGHELSVRARQECEEHGFFTARQFNRHFVLPQ 78
>SB_15078| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +2
Query: 290 EIKVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERR 451
E K+ G+K + D N + ++++ G+ + +E + I R WT++H ER+
Sbjct: 688 EQKIIGQKAK-QSDYYNRSAKELEELQPGDVVRVESPRGIGRGKSWTKAHVERK 740
>SB_27055| Best HMM Match : PWI (HMM E-Value=3.5e-08)
Length = 677
Score = 31.1 bits (67), Expect = 0.77
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +2
Query: 398 KKEIKREDGWTRSHFERRFLLPEGFPPERVECHLDKGKLKLIAFR------AEPLQERAV 559
K E ED RS+F+ R +P P+R +KGK + +A R E LQ++
Sbjct: 299 KVEKPSEDLTERSYFDPRVTVPAAVRPKRTFKFHEKGKFQQVAQRIRTKTQLEKLQKQIA 358
Query: 560 PIQEKSVNSEQTK 598
+ +K+ S TK
Sbjct: 359 AVAKKTGISSATK 371
>SB_14926| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1638
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 290 EIKVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERR 451
E K+ G+K + E ++K G+ + IE + I R WT++H ER+
Sbjct: 1191 EQKISGQKAKQSYYYNRSAKELKELKP-GDVVRIEPPRGIGRGKAWTKAHVERK 1243
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 293 IKVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKE 406
+++ K + +H D+QN +Q+Q + G+E + E K++
Sbjct: 114 LELSEKMLRLHQDLQNQNEQQLQTELKGSEELQEKKRQ 151
>SB_40817| Best HMM Match : Peptidase_M16_C (HMM E-Value=1.6e-36)
Length = 888
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 320 VHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERRF-LLPEG 469
+ ++ N P I+ +T+ + IE I + WTR H E LP G
Sbjct: 375 IEQNISNQKPLSIREETISQKPFIEVLLRITEQVKWTRDHHETHVTTLPNG 425
>SB_9200| Best HMM Match : Peptidase_A17 (HMM E-Value=4.4e-39)
Length = 1607
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 3/27 (11%)
Frame = +3
Query: 138 WRTGIRLLEHLKI---LSPSSPGTLSS 209
WRT + LLE+LK L PS+ GTL+S
Sbjct: 1222 WRTELPLLENLKFPRCLKPSNFGTLTS 1248
>SB_6412| Best HMM Match : Extensin_2 (HMM E-Value=8.1)
Length = 329
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 128 LRNLAYRDPIARAFEDPFSVFSRDPFFRDPIKYIRQATSPIED 256
L++L Y P ++ F P+F PI+Y ++ +P++D
Sbjct: 238 LKDLTYLTPPIEYPTKSYTSFKNLPYFTPPIEYPTKSYTPLKD 280
>SB_5980| Best HMM Match : Stig1 (HMM E-Value=1.4)
Length = 712
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 287 SEIKVDGKKVEVHLDVQNFTPEQIQVKTVGNEIMIEGKKEIKREDGWTRSHFERR 451
SE ++ G+K + E ++K G+ + IE + I R WT++H ER+
Sbjct: 562 SEQEIRGQKAKQSYYYNRSAKELKELKP-GDVVRIEPPRGIGRGKEWTKAHVERK 615
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,860,231
Number of Sequences: 59808
Number of extensions: 362134
Number of successful extensions: 960
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1560464625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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