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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10b05
         (397 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)            31   0.26 
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)                     31   0.26 
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.45 
SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29)                  30   0.78 
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_51592| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   1.8  
SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)                  29   1.8  
SB_56515| Best HMM Match : Ribosomal_L30 (HMM E-Value=5.6)             28   2.4  
SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.4  
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)                28   2.4  
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.4  
SB_10552| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   2.4  
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)              28   2.4  
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   3.2  
SB_3024| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   3.2  
SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.2  
SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)                  27   4.2  
SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3)                27   5.5  
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)                 27   5.5  
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.5  
SB_27578| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.3  
SB_54807| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.6  
SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.6  
SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7)                  26   9.6  
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.6  
SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)           26   9.6  

>SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)
          Length = 678

 Score = 31.5 bits (68), Expect = 0.26
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 93  PTLKETATNLLTTARTSLILPKITT--LMETATNLSTTVHITWTLPKADLTSSLPLSLVL 266
           P +  T    L T  T+L L  ITT  L+   T +   V IT TLP   +T+ LPL ++ 
Sbjct: 272 PLVAITTILHLVTITTTLPLVVITTILLLVVITTILPLVAITTTLPLVAITTILPLVVIT 331

Query: 267 AV 272
            +
Sbjct: 332 TI 333



 Score = 29.5 bits (63), Expect = 1.0
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +3

Query: 93  PTLKETATNLLTTARTSLILPKITTLMETA--TNLSTTVHITWTLPKADLTSSLPLSLVL 266
           P +  T T  L    T L L  ITT++     T +   V IT TLP   +T+ LPL  + 
Sbjct: 614 PLVVITTTLPLVVITTILPLVAITTILPLVAITTILPLVVITTTLPLVTITTILPLVAIT 673

Query: 267 AV 272
            +
Sbjct: 674 TI 675



 Score = 27.5 bits (58), Expect = 4.2
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +3

Query: 114 TNLLTTARTSLILP--KITTLMETA--TNLSTTVHITWTLPKADLTSSLPLSLVLAV 272
           T +L     + ILP   ITT++     T +   V IT TLP   +T+ LPL ++  +
Sbjct: 79  TTILPLVDITTILPLVAITTILPLVVITTILPLVVITTTLPLVAITTILPLVVITTI 135



 Score = 27.5 bits (58), Expect = 4.2
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +3

Query: 93  PTLKETATNLLTTARTSLILPKITTLMETA--TNLSTTVHITWTLPKADLTSSLPLSLVL 266
           P +  T    L    T L L  ITT++     T +   V IT TLP   +T+ LPL ++ 
Sbjct: 470 PLVAITTILPLVVITTILPLVVITTILPLVVITTILPLVVITTTLPLVAITTILPLVVIT 529

Query: 267 AV 272
            +
Sbjct: 530 TI 531



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +3

Query: 93  PTLKETATNLLTTARTSLILPKITTLMETA--TNLSTTVHITWTLPKADLTSSLPLSLVL 266
           P +  T    L    T L L  ITT++     T +   V IT TLP   +T+ LPL  + 
Sbjct: 515 PLVAITTILPLVVITTILPLVVITTILHLVAITTILPLVAITTTLPLVVITTILPLVAIT 574

Query: 267 AV 272
            +
Sbjct: 575 TI 576



 Score = 26.2 bits (55), Expect = 9.6
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
 Frame = +3

Query: 93  PTLKETATNLLTTARTSLILPKITTLMETA--TNLSTTVHITWTLPKADLTSSLPLSLVL 266
           P +  T    L    T L L  ITT++     T +   V IT TLP   +T+ LPL  + 
Sbjct: 578 PLVAITTILPLVAITTVLPLVVITTILPLVVITTILPLVVITTTLPLVVITTILPLVAIT 637

Query: 267 AV 272
            +
Sbjct: 638 TI 639


>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
          Length = 1165

 Score = 31.5 bits (68), Expect = 0.26
 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +3

Query: 108 TATNLLTTARTSLILPKITTLMETA--TNLSTTVHITWTLPKADLTSSLPLSLVLAV 272
           T T  L    T L L  ITTL+     T +   V IT TLP   +T++LPL ++  +
Sbjct: 541 TTTLPLVVITTILPLVTITTLLPLVVITTILPLVVITTTLPLVAITTTLPLVIITTI 597



 Score = 28.7 bits (61), Expect = 1.8
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
 Frame = +3

Query: 99  LKETATNLLTTARTSLILPKITTLMETATNLSTTVH---ITWTLPKADLTSSLPL 254
           L   +   +     +L L  ITT++   T ++TT+H   IT TLP   +T+ LPL
Sbjct: 502 LNHASKKAILAITNTLPLVVITTILHLVT-ITTTLHLVTITTTLPLVVITTILPL 555



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +3

Query: 123 LTTARTSLILPKITTLMETA--TNLSTTVHITWTLPKADLTSSLPLSLVLAV 272
           L    T L L  ITT++     T +   V IT TLP   +T+ LPL  +  +
Sbjct: 645 LVVITTILPLVVITTILHLVAITTILPLVVITTTLPLVTITTILPLVAITTI 696



 Score = 26.6 bits (56), Expect = 7.3
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 123 LTTARTSLILPKITTLMETATNLSTT--VHITWTLPKADLTSSLPL 254
           L T  T L L  ITT++      +T   V IT TLP   +T+ LPL
Sbjct: 555 LVTITTLLPLVVITTILPLVVITTTLPLVAITTTLPLVIITTILPL 600


>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 30.7 bits (66), Expect = 0.45
 Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
 Frame = +2

Query: 113 YEPIDNRPYIVNPPKDYNPNGNG-YEPIDNGAY--YVDPPQGRPYFKPTPFP 259
           Y P  N PY   P   Y P  N  Y P  N  Y    +PP   P + P P P
Sbjct: 116 YPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNP 167



 Score = 28.3 bits (60), Expect = 2.4
 Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
 Frame = +2

Query: 113 YEPIDNRPYIVNPPKDYNPNGNG-YEPIDNGAY----YVDPPQGRPYFKPTPFP 259
           Y P  N PY   P   Y P+ N  Y P  N  Y    Y  PP   P   P P P
Sbjct: 124 YPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPP 177



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = +2

Query: 113 YEPIDNRPYIVNPPKDYNPNGN-GYEPIDNGAYYVDPPQGRPYFKPTPFP 259
           Y P  N PY   P   Y P  N  Y P  N  Y   PP     + P P P
Sbjct: 108 YPPPPNPPYPPPPNAPYPPPPNPPYPPPPNAPY---PPSPNAPYPPPPNP 154



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = +2

Query: 113 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG-RPYFKPTP 253
           Y P  N PY   P   Y P  N   P      Y  PP    P + P P
Sbjct: 179 YPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPPYPPPPNAPNPPYPPPP 226


>SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29)
          Length = 447

 Score = 29.9 bits (64), Expect = 0.78
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +2

Query: 107 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPG 262
           NG  P +  P+   PP  Y P  NG +P+    Y+  P  G+P +   PF G
Sbjct: 314 NGQPPYNTPPFNGQPPY-YTPPFNG-QPL----YHTPPFNGQPPYNTPPFNG 359



 Score = 29.1 bits (62), Expect = 1.4
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
 Frame = +2

Query: 110 GYEPIDNRPYIVNPPKDYN-PNGNGYEPID----NG--AYYVDPPQGRPYFKPTPFPG 262
           G  P +  P+   PP  YN P  NG  P +    NG   YY  P  G+P +   PF G
Sbjct: 293 GQPPYNAPPFTGQPP--YNAPPFNGQPPYNTPPFNGQPPYYTPPFNGQPLYHTPPFNG 348


>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1506

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 19/66 (28%), Positives = 35/66 (53%)
 Frame = +3

Query: 108  TATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAVGSKEY 287
            T TN+ TT  T++    ITT + T T ++TT  IT T+    +T+++  +++    +   
Sbjct: 1063 TITNITTTINTTINTTIITTTI-TTTIITTT--ITTTIITTTITTTITTTIITTTVTTTI 1119

Query: 288  LRKLIT 305
            +   IT
Sbjct: 1120 ITTTIT 1125



 Score = 26.2 bits (55), Expect = 9.6
 Identities = 17/64 (26%), Positives = 32/64 (50%)
 Frame = +3

Query: 114  TNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAVGSKEYLR 293
            T  +TT  T + +  ITT + T  N  TT+ IT T+    +T+++  +++    +     
Sbjct: 1052 TITITTTTTIITITNITTTINTTIN--TTI-ITTTITTTIITTTITTTIITTTITTTITT 1108

Query: 294  KLIT 305
             +IT
Sbjct: 1109 TIIT 1112


>SB_51592| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 200

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +3

Query: 108 TATNLLTTARTSLILPKITTLMETATNLSTTVH--ITWTLPKADLTSSLPLSLV 263
           T + ++TT  + +I   ITT+ +  T L+TT+   I   LP    TS  PL ++
Sbjct: 20  TISQIITTL-SRIITDPITTISQIITTLATTISQIIRTPLPIITTTSRTPLRII 72


>SB_17462| Best HMM Match : DUF1168 (HMM E-Value=0.37)
          Length = 352

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 108 TATNLLTTARTSLILPKITTLMETATNLSTTVHITWTL 221
           T TN++TTA T+     I+T+  T T  +T + I  T+
Sbjct: 297 TNTNIITTATTTTTSTTISTITVTITTTTTIIIIVITI 334


>SB_56515| Best HMM Match : Ribosomal_L30 (HMM E-Value=5.6)
          Length = 183

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 81  CWLWPTLKETATNLLTTARTSLILPKITTLMETAT 185
           CW++PT+ ++A  + +  RT L L +I  L   AT
Sbjct: 129 CWIFPTVGKSAEEITSILRT-LFLRRIPLLFSKAT 162


>SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 89

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = +3

Query: 96  TLKETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLV 263
           T+   AT  + T  T++I    TT+  T T ++TT+  T T     +T+++  +++
Sbjct: 12  TIITNATTTIITLSTTIITTT-TTITTTTTTITTTITPTITTTTTIITTTITTTII 66


>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
          Length = 839

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 126 TTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSS 245
           T A  + + PK TT +ET     TTV +  T P  + TS+
Sbjct: 229 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 267


>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 286

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +3

Query: 111 ATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTS 242
           AT  +TT   ++  P  TT   TAT  +TT   T T P A  T+
Sbjct: 96  ATATITTYTATVTAPNATTTTPTATTTTTTT-TTTTTPYATTTT 138


>SB_10552| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 442

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 16/53 (30%), Positives = 20/53 (37%)
 Frame = +2

Query: 92  ANAQGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPT 250
           A A  +GY+  DN  Y          + NGY   DN       P   P +K T
Sbjct: 382 AEAHVDGYQTYDNPTYDTEHETHAEAHVNGYPTYDNPTCDTHSPARAPAYKRT 434


>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
          Length = 3094

 Score = 28.3 bits (60), Expect = 2.4
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 126  TTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSS 245
            T A  + + PK TT +ET     TTV +  T P  + TS+
Sbjct: 2291 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 2329



 Score = 27.5 bits (58), Expect = 4.2
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 126 TTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSS 245
           T A  + + PK TT +ET     TTV +  T P  + TS+
Sbjct: 776 TDAPATTLAPKTTTALETTVAAKTTV-VPETTPALETTSA 814


>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2388

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = -1

Query: 313  HYFVINFLRYSLLPTASTRERGRLEVRSALGRVHVICT 200
            HY  + F R    PT S R R R E   A  RVHV C+
Sbjct: 973  HYLKVGFERLPSPPTNSRRRRLRSE---ADARVHVTCS 1007


>SB_3024| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 806

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +1

Query: 166 P*WKRLRTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNILEN 297
           P  + L T  + CI R    +PT +   P PW    +++N+ ++
Sbjct: 560 PRLEMLNTLLRECIDRHAPLKPTKMTRPPAPWLKELDIQNLQQD 603


>SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 874

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -1

Query: 238 VRSALGRVHVICTVVDRFVAVSIRVVIFGRINDVRAVVNRFVAVS 104
           VR  + R      VV R    S+RVV+   +  VR V+ R+VA++
Sbjct: 772 VRVVMRRYVTSVRVVMRRYVASVRVVMPRYVASVRVVMRRYVAIA 816



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = -1

Query: 238 VRSALGR-VHVICTVVDRFVAV-SIRVVIFGRINDVRAVVNRFVA 110
           VR  + R V  +  V+ R+VA+ S+RVV+   +  VR V+ R+VA
Sbjct: 794 VRVVMPRYVASVRVVMRRYVAIASVRVVMRRYVASVRVVMRRYVA 838



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -1

Query: 238 VRSALGRVHVICTVVDRFVAVSIRVVIFGRINDVRAVVNRFVA 110
           VR  + R      VV R    S+RVV+   +  VR V+ R+VA
Sbjct: 818 VRVVMRRYVASVRVVMRRYVASVRVVMRRYVTSVRVVMRRYVA 860


>SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)
          Length = 266

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 14/53 (26%), Positives = 32/53 (60%)
 Frame = +3

Query: 114 TNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAV 272
           TN++TT+ T++I     T+  T T ++ T+ IT T+    +T ++ +++ + +
Sbjct: 168 TNIITTSNTNIITTTTITITITIT-ITITITITITI-TITITITITITITITI 218


>SB_31478| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
          Length = 515

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +2

Query: 95  NAQGNGYEPIDNRPYIVNPPKDYNPNGNGYE--PIDNGAYYVDPP 223
           N  G  ++P   RPY    P  + PNG+  E  P++N     +PP
Sbjct: 187 NHSGPPFKP-GQRPYQHGGPDQFGPNGHTEEMRPLENRGPPFEPP 230


>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
          Length = 249

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +3

Query: 114 TNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLA 269
           T   TT   +     ITT   T T +STT+  T T      T++   +++++
Sbjct: 84  TTTTTTFSATTTTTTITTTTTTTTTISTTISTTTTTTTISTTTTTITAVIIS 135


>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1141

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 96  TLKETAT-NLLTTARTSLILPKITTLME-TATNLSTTVHITWTLPKADLTS 242
           T  ET T +L+TTA  +     +TT  E T  +L+TT  +  T P+    S
Sbjct: 164 TAPETTTASLVTTAPETTTASLVTTAPEATTASLATTASLATTAPETTTAS 214



 Score = 27.1 bits (57), Expect = 5.5
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +3

Query: 87  LWPTLKETAT-NLLTTARTSLILPKITTLMETAT-NLSTTVHITWTLPKADLTSSLPLSL 260
           L  T  ET T +L+TTA  +     +TT  ET T +L+TT   T T   A        +L
Sbjct: 311 LLTTAPETTTASLVTTAPEATTASLVTTAPETTTASLATTAPETTTASLATTAPETTTAL 370

Query: 261 VLAVGSKEYLRKLIT 305
           ++    +     L T
Sbjct: 371 LVTTAPETATASLAT 385



 Score = 26.6 bits (56), Expect = 7.3
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = +3

Query: 96  TLKETAT-NLLTTARTSLILPKITTLME-TATNLSTTVHITWTLPKADLTSSLPLSLVLA 269
           T  ET T +L TTA  +     +TT  E T    +TT  +  T P+A   S    +L++ 
Sbjct: 74  TAPETTTASLATTAPETTTASFLTTAPEATTAPETTTASLVTTAPEATTASLATTALLVT 133

Query: 270 VGSKEYLRKLIT 305
              +     L+T
Sbjct: 134 TAPEATTASLVT 145



 Score = 26.2 bits (55), Expect = 9.6
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 108 TATNLLTTARTSLILPKITTLMETAT-NLSTTVHITWTLPKA 230
           T  +L+TTA  +     +TT  ET T +L+TT     T P+A
Sbjct: 662 TTASLVTTAPEATTASLLTTAPETTTASLATTAPEATTAPEA 703


>SB_27578| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 266

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 134 PYIVNPPKDY--NPNGNGYEPIDNGAYYVDPPQG 229
           P+ ++P   Y  +PNG  Y    NG  YV  P G
Sbjct: 8   PFSISPGVQYVFHPNGVQYVTQPNGVQYVTHPNG 41



 Score = 26.6 bits (56), Expect = 7.3
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
 Frame = +2

Query: 137 YIVNPPKDY--NPNGNGYEPIDNGAYYVDPPQGRPY 238
           Y+ +P   Y  +PNG  Y    NG  +V  P G  Y
Sbjct: 116 YVTHPNAQYVAHPNGAQYVTHPNGVQFVTHPNGVQY 151


>SB_54807| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 123

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = +3

Query: 108 TATNLLTTARTSLILPKITTLMETATNL---STTVHITWTLPKADL 236
           T T ++TT  T++I+  ITT + T   +   +TT  IT  +  A L
Sbjct: 77  TTTIIITTITTTIIITTITTTIATTITIIITTTTTIITTIITTAAL 122


>SB_47112| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 970

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +3

Query: 93  PTLKETATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLP 224
           PT ++T TNL +T R      + TT + +    +TT   T T+P
Sbjct: 188 PTTQQTTTNLPST-RQPTTNQQTTTTLPSTKQPTTTQQTTTTIP 230


>SB_40768| Best HMM Match : TM_helix (HMM E-Value=7.7)
          Length = 122

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +3

Query: 108 TATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAV 272
           T T  + T  T +I   ITT+    T + TT+ IT T     + +++  ++++ +
Sbjct: 6   TITITMITTITVIITTMITTITVIITTMITTITITTTTIITTMITTIITTVIIII 60


>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1308

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +2

Query: 119 PIDNRPYIVNPPKDYN---PNGNGYEPIDNGAYYVDPPQGR 232
           P+D++P IV+         PN +  +  + G   ++PP+G+
Sbjct: 364 PVDSQPLIVDMASSQGNQIPNSSSKQSRNEGTELINPPEGQ 404


>SB_26360| Best HMM Match : PKD_channel (HMM E-Value=1.3e-30)
          Length = 3015

 Score = 26.2 bits (55), Expect = 9.6
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = +3

Query: 108  TATNLLTTARTSLILPKITTLMETATNLSTTVHITWTLPKADLTSSL 248
            T  ++ TT  T+ I   ITT     T   TT HI  T+P A + +++
Sbjct: 1095 TTAHINTTITTAHINTTITTAHINTT--ITTAHINTTIPTAHINTTI 1139


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,064,285
Number of Sequences: 59808
Number of extensions: 263500
Number of successful extensions: 1062
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 690807992
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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