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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt10a08
         (634 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)          31   0.78 
SB_53252| Best HMM Match : RVT_1 (HMM E-Value=0)                       30   1.4  
SB_33259| Best HMM Match : RVT_1 (HMM E-Value=4.3e-12)                 30   1.4  
SB_19684| Best HMM Match : RVT_1 (HMM E-Value=0)                       30   1.4  
SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0)                 29   2.4  
SB_26377| Best HMM Match : HIPIP (HMM E-Value=9.1)                     29   2.4  
SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10)          29   2.4  
SB_48080| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.1  
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)              29   4.1  
SB_21599| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.5  
SB_25803| Best HMM Match : PLDc (HMM E-Value=3.9e-12)                  28   5.5  
SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.5  
SB_27092| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_20112| Best HMM Match : EGF (HMM E-Value=0)                         28   7.2  
SB_59720| Best HMM Match : GARS_N (HMM E-Value=9.24857e-44)            28   7.2  
SB_20380| Best HMM Match : Lipase_GDSL (HMM E-Value=0.24)              28   7.2  
SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  
SB_57555| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  
SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08)          27   9.6  
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  
SB_58952| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.6  
SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)          27   9.6  
SB_7343| Best HMM Match : EGF (HMM E-Value=0)                          27   9.6  

>SB_23671| Best HMM Match : Tetraspannin (HMM E-Value=6.6e-38)
          Length = 919

 Score = 31.1 bits (67), Expect = 0.78
 Identities = 18/95 (18%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
 Frame = +1

Query: 154 NALIALNILYVVVASILISVTVYGQASSLVTN---LPIVGGILACGVFXXXXXXXXXXXX 324
           N ++  + + ++   I + +T   Q +SL++N   + + G ++A G              
Sbjct: 23  NTILLFSGIAILAVGIWV-ITSRSQYNSLLSNDNYVTVPGLMIAAGCLVIIVCVVGCVAV 81

Query: 325 VKHHQVMLFFYMVILFLLFLVQFSIACACLAVNSE 429
           +K ++ +L  Y+++L L+F+++ +     +   SE
Sbjct: 82  IKENRFILVSYLIMLVLIFILEIATGVVAVIYRSE 116


>SB_53252| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 366

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 323 APASPNMEIKMRNTPHASIPPTMGKLVTRDDA 228
           +PASP      R T H S+P T G L  R +A
Sbjct: 315 SPASPETSPASRETSHPSVPSTPGSLWYRQEA 346


>SB_33259| Best HMM Match : RVT_1 (HMM E-Value=4.3e-12)
          Length = 303

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 323 APASPNMEIKMRNTPHASIPPTMGKLVTRDDA 228
           +PASP      R T H S+P T G L  R +A
Sbjct: 252 SPASPETSPASRETSHPSVPSTPGSLWYRQEA 283


>SB_19684| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 617

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 323 APASPNMEIKMRNTPHASIPPTMGKLVTRDDA 228
           +PASP      R T H S+P T G L  R +A
Sbjct: 566 SPASPETSPASRETSHPSVPSTPGSLWYRQEA 597


>SB_1519| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
          Length = 943

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +3

Query: 318 RSSQASPSYAVLLHGNTIPFV 380
           +SS+ SP +A+ LHGN  PFV
Sbjct: 797 KSSEGSPCFALDLHGNRKPFV 817


>SB_26377| Best HMM Match : HIPIP (HMM E-Value=9.1)
          Length = 102

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 5/34 (14%)
 Frame = +3

Query: 219 LWASVIPGYQLAHCRWYT-----SMWSISHLNLH 305
           LW  +IP Y +  C  YT      +WS+ HL  H
Sbjct: 46  LWTPMIPSYLIGQCSVYTISFWYILWSLCHLQGH 79


>SB_10599| Best HMM Match : Tetraspannin (HMM E-Value=1.8e-10)
          Length = 691

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
 Frame = +1

Query: 355 YMVILFLLFLVQFSIACACLAVNSEQQEMLAQQGWNKVD-MDVKQ------QVQERFQCC 513
           + V+L L+F+++ +      A   + +  +     N VD  D K+      +VQ  F+CC
Sbjct: 406 FAVLLALIFVLEIAAGALAYAYKGKLEGYVRTGLKNGVDHYDKKEYKKAMDKVQGEFKCC 465

Query: 514 GFQDST---FTNTTADHPSCAVVNAI-----CCKGI 597
           G++DS    + N+T    SC   N       C KG+
Sbjct: 466 GYEDSNDHGYKNSTVP-KSCKDTNGTVFSKNCVKGL 500


>SB_48080| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 514

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
 Frame = +3

Query: 99  NYKVIASFQNVWRFHLFEECFD---RVEHSLRGCSKHLDFSHSLWASVIPGYQLAHCRWY 269
           +Y   ASF NV + +L E CF      E  +    + L +     A +  GY+    RW 
Sbjct: 255 DYSRFASFANVIQMNLSEHCFAVSYPGELMVTMMGRGLGYEAKKNAMMHSGYEATMKRWQ 314

Query: 270 TSMWSISHLNLHIGACR 320
               SI     HIG  R
Sbjct: 315 DHEKSIKDAVAHIGLTR 331


>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
          Length = 406

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -3

Query: 320 PASPNMEIKMRNTPHASIPPT 258
           P  PN  I    TPH SIPPT
Sbjct: 236 PLIPNTSIPPTPTPHTSIPPT 256


>SB_21599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 95

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 5/34 (14%)
 Frame = +3

Query: 219 LWASVIPGYQLAHCRWYT-----SMWSISHLNLH 305
           LW  +IP Y    C  YT      +WS+ HL  H
Sbjct: 39  LWTPMIPSYLKGQCHVYTISFWYILWSLCHLQGH 72


>SB_25803| Best HMM Match : PLDc (HMM E-Value=3.9e-12)
          Length = 854

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 156 CFDRVEHSLRGCSKHLDFSHSLWASVIPGYQLAHCR 263
           C    + SL+  +KH  F  SL  S      LAHC+
Sbjct: 765 CLQITDRSLKALAKHSKFLQSLNVSKTKELHLAHCK 800


>SB_23554| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 514

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
 Frame = +1

Query: 268 ILACGVFXXXXXXXXXXXXVKHHQVMLFFYMVILFLLFLVQFSIACACLAVNSEQQEMLA 447
           I+A G F            +K H+ +L  +  +LF++  V+ +         ++ +E L 
Sbjct: 329 IIAVGAFIALVSFFGCCGAIKEHRCLLATFFALLFIILAVEITGTALGYVYRNKVEEQLG 388

Query: 448 Q----------QGWNKVDMDVKQQVQERFQCC---GFQDSTFTNTTADHPSCAVVNAICC 588
           +          +   +   D    +Q++ +CC   GF+D   +  T  + S  +V   CC
Sbjct: 389 KDMNDTIVSYGEKGKEGITDAYDAIQKKEKCCGINGFKDWQRSYYTKGNHS--IVPDSCC 446

Query: 589 KGIN 600
           K ++
Sbjct: 447 KTVS 450


>SB_27092| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 102

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
 Frame = +3

Query: 219 LWASVIPGYQLAHCRWYT-SMWSISHLNLHIGACRSSQASP 338
           LW  +IP Y    C  YT S W I     H+     S  +P
Sbjct: 46  LWTPMIPSYLKGQCHVYTISFWYILWSLCHLQGYTQSTCAP 86


>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
          Length = 2112

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +1

Query: 538 NTTADHPSCAVVNA-ICCKGINTTNCQCEP 624
           N   D P+ A  N  +C  G+NT +C+C P
Sbjct: 488 NDPNDCPANACQNGGVCIDGMNTYSCKCHP 517


>SB_59720| Best HMM Match : GARS_N (HMM E-Value=9.24857e-44)
          Length = 200

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -3

Query: 161 KAFFEQVKPPHILKASNNFVIKKILIL 81
           KAF E   PP++LKA      K +LIL
Sbjct: 136 KAFLETFNPPYVLKADGLAAGKGVLIL 162


>SB_20380| Best HMM Match : Lipase_GDSL (HMM E-Value=0.24)
          Length = 416

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 556 PSCAVVNAICCKGINTTNCQCEPCME 633
           P C  +  +C  G  T+NC CE C +
Sbjct: 120 PCCNEITGLCGNG--TSNCNCEACTD 143


>SB_12109| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4085

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 475  PYQLYSIPVEPTSLAARS*LPNKHKQSKTVPKT 377
            P++ Y  P+  TSL A S LP   +Q  + P T
Sbjct: 4033 PFEQYECPIYRTSLRASSLLPAASQQISSPPST 4065


>SB_57555| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 323

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
 Frame = +1

Query: 412 LAVNSEQQEMLAQQGWNKVDMDVKQQV--QERFQCCGFQDSTFTNTTADHPSC---AVVN 576
           L  ++EQ   LAQ GW KV   +K     ++R           T    D   C    V N
Sbjct: 229 LPKDNEQGNKLAQSGWRKVRESLKAITGREKRKDIAHMSMLELTKLFEDIRECRYLRVGN 288

Query: 577 AICCKG--INTTNCQCEPC 627
               +G  +NT  C+C  C
Sbjct: 289 HTSYRGDSVNTKQCKCIAC 307


>SB_23414| Best HMM Match : Tetraspannin (HMM E-Value=3.8e-08)
          Length = 357

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 13/178 (7%)
 Frame = +1

Query: 118 AFKMCGGFTCSKNALIALNILYVVVASILISVTVYGQASSLVTNLPIVGGILACGVFXXX 297
           AF +C GF    +  I    ++  V  IL+ +      S+L  +L +V  I     F   
Sbjct: 57  AFSICNGFLWLTSLGITTFGIFSFVMEILVRLENRLSNSTLAISLTVV--IFGAASFILC 114

Query: 298 XXXXXXXXXVKHHQVMLFFYMV-ILFLLFLVQFSIACACLAVNSEQQEMLAQQGW--NKV 468
                    +K  +     +++ I F + ++ F I  +   V ++ +E++    +  N  
Sbjct: 115 TLGCSRKPSIKQLRFYRSSFVIFITFEIIVMVFGIIQSS-RVPTDTREIVNWSVFILNYQ 173

Query: 469 DMDVKQQ---VQERFQCCGFQD------STFTNTTADHPSCAVVNAICCK-GINTTNC 612
           D  ++     +Q+  +CCGF+D      + + +  ++  S   V A CCK  I+ + C
Sbjct: 174 DDSIRDDLDSIQKNLKCCGFKDYNDWELNPYYSCKSNGYSRCSVPASCCKLDISGSRC 231


>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2162

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
 Frame = +1

Query: 508 CCGFQDSTFTNTTADH-PSCAVVNAICCKGINTTNCQC 618
           C    + TF     D  P+    N  C  GIN   CQC
Sbjct: 681 CLSGFNGTFCEVNIDDCPAIGCNNGTCIDGINNYTCQC 718


>SB_58952| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 556 PSCAVVNAICCKGINTTNCQCEPCME 633
           P C  V  +C  GI   NC CE C +
Sbjct: 48  PCCNEVTGMC--GIGKANCTCESCTD 71


>SB_31429| Best HMM Match : Tetraspannin (HMM E-Value=5.9e-35)
          Length = 286

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +1

Query: 490 VQERFQCCG------FQDSTFTNTTADHPSCAVVNAICCKGINTTNCQC 618
           +Q RF+CCG      +Q + + + ++  P+   V   CCK     N QC
Sbjct: 157 IQTRFKCCGIESYKDWQANRYFSCSSPVPTACGVPFSCCKKSIQGNRQC 205


>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1233

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = +1

Query: 472 MDVKQQVQERFQCCGFQDSTFTNTTADHPSCA----VVNAICCKGINTTNCQCEP 624
           +D+   +++ + C      T  N   +   CA    +   +C  G+N+ +C C+P
Sbjct: 184 LDINAGLRDAYNCSCVPGFTGKNCEINIDDCASRPCLNGGLCVDGVNSYSCLCQP 238


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,406,065
Number of Sequences: 59808
Number of extensions: 416289
Number of successful extensions: 1078
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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