Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0086
(524 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.036
SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8) 35 0.047
SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 31 0.44
SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035) 29 2.3
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10) 28 5.4
SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025) 28 5.4
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 63.3 bits (147), Expect = 1e-10
Identities = 38/113 (33%), Positives = 57/113 (50%)
Frame = +1
Query: 181 FDLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKY 360
FD +++W A+KL H Y + E+ R I+ ++ I KHN + S+ L MN
Sbjct: 240 FDEDEQQWQAWKLFHTKKYTTVTEEGARKAIWRDNLKKIQKHNAEGH----SFTLAMNHL 295
Query: 361 GDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRK 519
GD+ EF G H N K GS F++P++V++P+ VDWRK
Sbjct: 296 GDLTQDEFRYFYTGMR---SHYSNYTKKQGSA----FLAPSHVQVPDTVDWRK 341
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/105 (35%), Positives = 54/105 (51%)
Frame = +1
Query: 202 WSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 381
W A+K H Y ++ E+ R I+ + I HN+ G S+KL MN GDM E
Sbjct: 29 WKAWKSFHGKEYPNKNEETMRNFIWQNNLKKIVTHNE----GKHSFKLAMNHLGDMTSLE 84
Query: 382 FVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 516
+T+ G K KH ++ +GA F+ PANVK+ + +DWR
Sbjct: 85 ISQTLLGL-KLKKHAES------QPKGATFLPPANVKVVDSIDWR 122
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 54.4 bits (125), Expect = 5e-08
Identities = 35/106 (33%), Positives = 52/106 (49%)
Frame = +1
Query: 199 EWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHH 378
+W A+K H Y E ED R I+ ++ I+ KHN + SYKL MN + D+
Sbjct: 180 QWHAWKDFHGKTYTGEEED-LRRAIWNDNLEIVKKHNAENH----SYKLDMNHFADLTVT 234
Query: 379 EFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWR 516
EF + G+ + S G+ F+ +NV+LP +VDWR
Sbjct: 235 EFKQRFMGYRAASN----------STGGSTFLPLSNVQLPAEVDWR 270
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 35.5 bits (78), Expect = 0.027
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = +1
Query: 184 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 363
DLV +++ F+ QH YE + E R I+ + I N++ + YKL N +
Sbjct: 1188 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRR----SLPYKLEPNHFA 1243
Query: 364 DMLHHEFVKTMNGFNKTAKHNKN 432
D+ EF + + +K N
Sbjct: 1244 DLTDDEFKSYKDALDDESKDVMN 1266
>SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 35.1 bits (77), Expect = 0.036
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +1
Query: 184 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 363
DLV +++ F+ QH YE + E R I+ + I N++ + YKL N +
Sbjct: 38 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRR----SLPYKLEPNHFA 93
Query: 364 DMLHHEFVKTMNGFNKTAKHNKN 432
D+ EF + +K N
Sbjct: 94 DLTDDEFKSYKGALDDESKDVMN 116
>SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8)
Length = 234
Score = 34.7 bits (76), Expect = 0.047
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 184 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 363
DLV +++ F+ QH YE + E R I+ + I ++ + YKL N +G
Sbjct: 38 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMKRR----SLPYKLEPNHFG 93
Query: 364 DMLHHEF 384
D+ EF
Sbjct: 94 DLTDDEF 100
>SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 34.3 bits (75), Expect = 0.062
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 349 MNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRK 519
MN++ DM EF + A + RGA F++P N++LP +VDWR+
Sbjct: 1 MNEFADMCEEEFRNVYLRYRFNASSPQ---------RGATFMAPNNLELPTKVDWRQ 48
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +1
Query: 184 DLVKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 363
DLV +++ F+ QH YE + E R I+ + I N+ + YKL N +
Sbjct: 209 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNR----CSLPYKLEPNHFA 264
Query: 364 DMLHHEFVKTMNGFNKTAKHNKN 432
D+ EF + +K N
Sbjct: 265 DLTDDEFKSYKGALDDESKDVMN 287
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 31.5 bits (68), Expect = 0.44
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +1
Query: 343 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDW 513
+ MN GD+ EF G A HN K G A ++ P+NVK+P VDW
Sbjct: 1 MAMNHLGDLTEDEFRYFYLGVR--AHHNST---KRG---WATYMPPSNVKIPSSVDW 49
>SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035)
Length = 396
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = -2
Query: 442 SCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*CACAQRISSC 263
SC++ CC+ Q C GG C+ C P KK T C R C SC
Sbjct: 129 SCSNGCCLGQRC--------LNGGTCVEHCEDPK-KKFSCACTPSCSGRTCESCGTYRSC 179
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 28.7 bits (61), Expect = 3.1
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +1
Query: 190 VKEEWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 369
++ + ++ QH Y+SE E + R I+ + I N+K + YKL N + D+
Sbjct: 257 IERMYRKYQGQHNKQYDSEHEVSKRKHIFRHNMRYIRSINRKN----LKYKLAPNHFVDL 312
Query: 370 LHHEF 384
E+
Sbjct: 313 TDGEY 317
>SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10)
Length = 281
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +1
Query: 259 FRMKIYAEHKHIIAKHNQ---KYEMGLVSYKLGMNKY 360
+RM + A+ + ++AK+ KY MG+ Y++G+ KY
Sbjct: 148 YRMGV-AKCRMVVAKYRMGVAKYRMGVAKYRMGVAKY 183
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +1
Query: 259 FRMKIYAEHKHIIAKHNQ---KYEMGLVSYKLGMNKY 360
+RM + A+++ +AK+ KY MG+ Y++G+ KY
Sbjct: 169 YRMGV-AKYRMGVAKYRMDVAKYRMGVAKYRMGVAKY 204
>SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025)
Length = 1616
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 167 VLFSSLTWSRKSGVPSSCSTVSTTKARSKTISA*RY 274
VL L+W R + +C TV T R +T+ A Y
Sbjct: 336 VLVEQLSWFRPTSFVETCLTVRTIATRLRTLCAYAY 371
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,045,190
Number of Sequences: 59808
Number of extensions: 301896
Number of successful extensions: 1006
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1184975377
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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