Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0070
(513 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 61 6e-10
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 56 1e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 50 9e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 3e-06
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 47 8e-06
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 42 3e-04
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 31 0.42
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 31 0.42
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 30 0.97
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 30 0.97
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 1.3
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 29 2.2
SB_31039| Best HMM Match : Fibrinogen_C (HMM E-Value=4.2e-39) 29 3.0
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 5.2
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 74.9 bits (176), Expect = 3e-14
Identities = 31/91 (34%), Positives = 51/91 (56%)
Frame = +1
Query: 241 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 420
P+ + +PFNKNFY+ HP + K+S E+++ R + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 421 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
+ ++ + Y +PT IQ Q PIA+SG+++
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDI 557
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 61.7 bits (143), Expect = 3e-10
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +1
Query: 226 QNMRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFE 402
+ ++ D +V QPF K+FY P + K +P E +E+R + E + V G P++ +
Sbjct: 49 EELQPVDHKTVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWA 108
Query: 403 EANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
+ + +K Y++PTPIQAQ P+ MSG+++
Sbjct: 109 QTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDM 145
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +1
Query: 313 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 480
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 465
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 466 PIQAQGWPIAMSGKNL 513
PIQ Q P+ +SG+++
Sbjct: 221 PIQMQVLPVLLSGRDV 236
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 50.4 bits (115), Expect = 9e-07
Identities = 20/59 (33%), Positives = 36/59 (61%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + +++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDI 141
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 325 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 492
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 493 AMSG 504
G
Sbjct: 197 MAHG 200
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 47.2 bits (107), Expect = 8e-06
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = +1
Query: 271 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 450
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 451 YKEPTPIQAQGWPIAMSGKNL 513
++ PTPIQ Q MSG+++
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDI 112
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G+++
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDV 751
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 41.9 bits (94), Expect = 3e-04
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G+++
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDV 174
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 361 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
VSG I F E F + + + GY+ PTP+Q PI M+G++L
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDL 519
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 31.9 bits (69), Expect = 0.32
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 388 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
I FE+ + + + V GYK+PTP+Q PI ++L
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDL 915
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 31.5 bits (68), Expect = 0.42
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
+ V +G+ PTPIQA P+A+ GK++
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDV 50
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 31.5 bits (68), Expect = 0.42
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 388 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
++ F + G+ G+ PT IQ QG P+A+SG+++
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDV 90
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 0.74
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 373 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 486
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 30.3 bits (65), Expect = 0.97
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
FE+ + G+ G+ +P+PIQ + P+A++G+++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDI 87
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 30.3 bits (65), Expect = 0.97
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 513
FE+ + G+ G+ +P+PIQ + P+A++G+++
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDI 87
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 283 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 423
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +1
Query: 349 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 501
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_31039| Best HMM Match : Fibrinogen_C (HMM E-Value=4.2e-39)
Length = 411
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -3
Query: 268 VGVKQNPNLGDACSDLQRILFSHQ--ILQILQIYCH 167
+GVKQ P L +CS++Q F+H I I CH
Sbjct: 269 IGVKQQPPLLPSCSEIQSEHFAHTSGIFPIALTPCH 304
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 232 CSDLQRILFSHQILQILQIYCHRC-QIETN 146
CS +L +IL+ +YC +C Q ETN
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQAETN 43
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 163 CQIETNYRRICCLLQIWN-HRFHGYYSS 83
C + +YRR CC L +W H + Y+SS
Sbjct: 218 CCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,465,466
Number of Sequences: 59808
Number of extensions: 240920
Number of successful extensions: 738
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1136110413
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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