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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0069
         (644 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2393| Best HMM Match : No HMM Matches (HMM E-Value=.)               84   1e-16
SB_32365| Best HMM Match : PALP (HMM E-Value=0.064)                    62   4e-10
SB_18116| Best HMM Match : PALP (HMM E-Value=0)                        62   4e-10
SB_32670| Best HMM Match : CIMR (HMM E-Value=0)                        31   0.80 
SB_45316| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.9  
SB_22425| Best HMM Match : PigN (HMM E-Value=0)                        29   3.2  
SB_28110| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.3  
SB_36867| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.7  
SB_13869| Best HMM Match : Antirestrict (HMM E-Value=4.5)              28   5.7  
SB_54464| Best HMM Match : DUF1566 (HMM E-Value=4.5)                   27   9.9  
SB_7324| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   9.9  

>SB_2393| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 384

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 38/65 (58%), Positives = 50/65 (76%)
 Frame = +2

Query: 446 DILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKP 625
           +IL  IG+TPLV+++ + K  GLKCE+ AKCEF N GGSVKDRI  RM  +AE++G LKP
Sbjct: 3   NILQKIGDTPLVRINNIGKTYGLKCELLAKCEFFNAGGSVKDRIGLRMIEEAEREGRLKP 62

Query: 626 GKSVI 640
           G ++I
Sbjct: 63  GDTLI 67


>SB_32365| Best HMM Match : PALP (HMM E-Value=0.064)
          Length = 129

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +2

Query: 509 GLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKSVI 640
           GLKCE+ AKCEF+NP GS+KDRI  RM  DAE+   +KPG ++I
Sbjct: 7   GLKCEVVAKCEFMNPVGSLKDRIGVRMIEDAERDNHIKPGDTLI 50


>SB_18116| Best HMM Match : PALP (HMM E-Value=0)
          Length = 470

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = +2

Query: 509 GLKCEMYAKCEFLNPGGSVKDRIAYRMFLDAEQKGILKPGKSVI 640
           GLKCE+ AKCEF+NP GS+KDRI  RM  DAE+   +KPG ++I
Sbjct: 7   GLKCEVVAKCEFMNPVGSLKDRIGVRMIEDAERDNHIKPGDTLI 50


>SB_32670| Best HMM Match : CIMR (HMM E-Value=0)
          Length = 1441

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 355 WHIELCEKILYTKGHASHCKGTGSKSEGT 441
           +HI +C +I  T GH  HC    +   GT
Sbjct: 196 FHINICREITPTTGHTQHCPAGSAACNGT 224


>SB_45316| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 62

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +2

Query: 449 ILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 580
           +  V+G  P   L+ + ++EG + E +   EFL PGGS   R A
Sbjct: 10  LFTVVGKAPAEPLAPITEEEG-RSE-HKIIEFLQPGGSTSSRAA 51


>SB_22425| Best HMM Match : PigN (HMM E-Value=0)
          Length = 913

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
 Frame = -2

Query: 442 MYLLISIQCPYNVRHVL*CKEFSRRV--RCAIFSIHMVRHVAVYRFYCLYLKFT 287
           +Y  +++  P+ +  +L CK     V   CA  ++H+VR V VY  + + L  T
Sbjct: 799 VYCFMTVFSPFLMGTLLLCKVVVPFVIVTCAFDAVHLVRQVPVYSLFLVVLVLT 852


>SB_28110| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 257

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -1

Query: 440 VPSDFDPVPLQCEACPLV*RIFSQSSMCHF*HPHGSTCCCLSFLLLVFKI 291
           V  +FD +P     C +V  + S SSM  F H H S  C + FLL + ++
Sbjct: 157 VAREFDGIPSPLVVCDIVHLLSSASSMA-FRH-HFSLSCPMEFLLPLLQV 204


>SB_36867| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 232

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -1

Query: 440 VPSDFDPVPLQCEACPLV*RIFSQSSMCHF*HPHGSTCCCLSFLLLVFKI 291
           V  +FD +P     C +V  + S SSM  F H H S  C + FLL + ++
Sbjct: 132 VAREFDGIPSLLVVCDIVHLLSSASSMA-FRH-HFSLSCPMEFLLPLLQV 179


>SB_13869| Best HMM Match : Antirestrict (HMM E-Value=4.5)
          Length = 149

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +2

Query: 500 KDEGLKCEMYAKCEFLNPGGSVKDRIA 580
           K  G K  +YA+ EFL PGGS   R A
Sbjct: 15  KSNGGKA-IYARIEFLQPGGSTSSRAA 40


>SB_54464| Best HMM Match : DUF1566 (HMM E-Value=4.5)
          Length = 174

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 512 LKCEMYAKCEFLNPGGSVKDRIA 580
           +KC ++   EFL PGGS   R A
Sbjct: 43  VKCLLFRFIEFLQPGGSTSSRAA 65


>SB_7324| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 185

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +2

Query: 419 LDRNQKVHSDILNVIGNTPLVKLSKLPKDEGLKCEMYAKCEFLNPGGSVKDRIA 580
           +D   K+ +  L  I  T LVK ++   +   K  +Y   EFL PGGS   R A
Sbjct: 25  VDGIDKLDAVFLTAIWET-LVKNAETAANTS-KSSLYLGIEFLQPGGSASSRAA 76


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,821,850
Number of Sequences: 59808
Number of extensions: 378879
Number of successful extensions: 1417
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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