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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0030
         (588 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)          36   0.025
SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.)               35   0.043
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.40 
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.92 
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)                       31   0.92 
SB_28560| Best HMM Match : NHL (HMM E-Value=1.8e-14)                   29   2.1  
SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_42820| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_39563| Best HMM Match : Ctr (HMM E-Value=0.39)                      29   2.8  
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)                   29   3.7  
SB_14229| Best HMM Match : VAR1 (HMM E-Value=5)                        29   3.7  
SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)                        29   3.7  
SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)               29   3.7  
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.9  
SB_2431| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   4.9  
SB_52435| Best HMM Match : RYDR_ITPR (HMM E-Value=1.4)                 28   4.9  
SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)           28   4.9  
SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.5  
SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)           28   6.5  
SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66)                  27   8.6  
SB_17683| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.6  
SB_26931| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)                 27   8.6  

>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
          Length = 1494

 Score = 35.9 bits (79), Expect = 0.025
 Identities = 36/115 (31%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
 Frame = +1

Query: 169  SPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFL 348
            S LPS+ L+ +S+L + L    + S     +  LS  PTS    +  L     P    FL
Sbjct: 1156 SSLPSDFLTSSSSLSDFLTSSSLLSDFLTSSSSLSVFPTSSSLPSDFLTSSSLP--SDFL 1213

Query: 349  KSSSALS--HTSPPHPHSLKTTGHNYSVNLLKKRVNSVILVEFEMPIYFLTYLSN 507
             SSS+LS   TS   P    T+  + S  L      SV      +P  FLT  S+
Sbjct: 1214 TSSSSLSVFPTSSSLPSDFLTSSSSLSDFLTSSSSLSVFPTSSSLPSDFLTSSSS 1268


>SB_7983| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 836

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 25/101 (24%), Positives = 46/101 (45%)
 Frame = +1

Query: 247  TQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSV 426
            T    ++L + P+SP  T+SS R H +PHH      +  +  T+P  P +  T  +++  
Sbjct: 728  TTIHIIILITAPSSPS-TSSSERHHHHPHHQHSAIITIHIIITAPSPPSTSSTQRYHHHP 786

Query: 427  NLLKKRVNSVILVEFEMPIYFLTYLSNFRYSFLYFCTELFY 549
            +     + ++ ++     +  L + S   Y    FC  LFY
Sbjct: 787  HHHHSAIITIYII-----VNHLCHFSVGCYCCRPFCRYLFY 822



 Score = 31.1 bits (67), Expect = 0.70
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = +1

Query: 265 VLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
           ++ + P+SP  T+SS R H +PHH     ++  +  T+P  P +  +  H++
Sbjct: 470 IIITAPSSPS-TSSSQRHHHHPHHHHSAITTIHIIITAPLSPSTSSSQRHHH 520



 Score = 30.7 bits (66), Expect = 0.92
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = +1

Query: 265 VLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
           ++++ P SP  T+SS R H +PHH     ++  +  T+P  P +  +  H++
Sbjct: 48  IITTVP-SPTSTSSSQRYHHHPHHHHSAITTIHIIITAPSPPSTSSSQRHHH 98



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 20/93 (21%), Positives = 44/93 (47%)
 Frame = +1

Query: 142 NTLMRLEMVSPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDH 321
           + +  + +++ +PS   + TS+ +   +    + S      ++ + P SP  T+SS R H
Sbjct: 41  SAITTIHIITTVPSP--TSTSSSQRYHHHPHHHHSAITTIHIIITAP-SPPSTSSSQRHH 97

Query: 322 IYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
            +PHH      +  +  T+P  P +  +  H++
Sbjct: 98  HHPHHHHSAIITIHIIITAPSPPSTSSSQRHHH 130



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
           SP  T+SS R H +PHH     ++  +  T+P  P +  +  H++
Sbjct: 640 SPPSTSSSQRHHHHPHHYHSAITTINIIITAPSPPSTSSSQRHHH 684



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = +1

Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
           SP  T+SS R H +PHH     ++  +  T+P  P +  +  H++
Sbjct: 216 SPPSTSSSQRYHHHPHHHHSAITTIHIIITAPSPPSTSSSQRHHH 260



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
           SP  T+SS R H +PHH     ++  +  T+P  P    +  H++
Sbjct: 378 SPPSTSSSQRHHHHPHHHHSAITTIHIIITAPSSPSISSSQRHHH 422



 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
           SP  T+SS R H +PHH      +  +  T+P  P +  +  H++
Sbjct: 444 SPPSTSSSQRHHHHPHHHHSAIITIHIIITAPSSPSTSSSQRHHH 488



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
           SP  T+SS R H +PHH     ++  +  T+P  P S+ ++  N+
Sbjct: 150 SPPSTSSSQRHHHHPHHHHSAITTIHIIITAPSSP-SISSSQRNH 193



 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 286 SPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNY 420
           SP  T+SS R H +PHH     ++  +  T+P  P S+ ++  N+
Sbjct: 312 SPPSTSSSQRHHHHPHHHHSAITTIHIIITAPSSP-SISSSQRNH 355



 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +1

Query: 265 VLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPH-SLKTTGHNY 420
           ++ + P SP  T+SS R H +PHH      +  +  T+P  P  SL    H++
Sbjct: 502 IIITAPLSPS-TSSSQRHHHHPHHHHSAIITIHIIITAPSPPSISLSQRHHHH 553



 Score = 24.2 bits (50), Expect(2) = 2.5
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = +1

Query: 352 SSSALSHTSPPHPHSLKTTGH 414
           SSS L H  P H HS  TT H
Sbjct: 711 SSSQLHHHHPYHYHSAITTIH 731



 Score = 23.4 bits (48), Expect(2) = 2.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 286 SPMRTASSLRDHIYPHH 336
           SP  T+SS R H +P+H
Sbjct: 672 SPPSTSSSQRHHHHPYH 688


>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 497

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 328 PHHPQFLKSSSALSHTSPPHPHSL-KTTGHNYSVNLLKK 441
           PHHP  L       HT+P HPH L K T  ++++ L K+
Sbjct: 237 PHHPLGLSK-----HTAPDHPHGLSKHTAPDHTIGLYKR 270


>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1000

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
 Frame = +3

Query: 105  KQESSIEPDGSYQ---YSYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTIQ 275
            K++ S E   SY+   Y+ ETG+   + E     N   +EPA + +G F  P  +    Q
Sbjct: 848  KRKRSDEEFDSYESGDYTDETGSSCDSEEYTDTDN---DEPAHKNDGSF--PRRNESPSQ 902

Query: 276  LSYIANENGFQPQGSHLPTPPPIP 347
                +      P G  +P PPP P
Sbjct: 903  TPGGSESPSASPPGGSVPPPPPPP 926


>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
          Length = 2119

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = +3

Query: 147  SYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTIQLSYIANENGFQPQGSHL 326
            S +TG G+    R   +     E ++ V+G+ +  SED G ++  +   + G +P   H+
Sbjct: 1833 SKDTGEGVVGTSREPTRPGSKYEESVSVDGKKKEDSEDSGLVEFGF-PRQTGQEPLNFHI 1891


>SB_28560| Best HMM Match : NHL (HMM E-Value=1.8e-14)
          Length = 453

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
 Frame = +1

Query: 163 MVSPLPSEALSKTSALKNLLYR-----LKVNSSTQARTVVLSSCPTSPMRTASSLRDHIY 327
           +V+   + A+ + S+   L+Y      L + SST A  VV SSC  SP    +  +D+IY
Sbjct: 189 LVADRGNRAIKRFSSSGELIYSYVDLSLDITSSTDA-LVVKSSCLLSPQNVVTDAQDNIY 247


>SB_56163| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 157

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +3

Query: 216 PALQVEGQFQYPSEDGGTIQLSYIANENGFQPQGSHLPTPPP 341
           P +     F YP +D       Y A    + PQG+ LP PPP
Sbjct: 110 PPVDQYSAFPYPPQDQQAPP--YPAQNQYWNPQGTSLPPPPP 149


>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 469

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +1

Query: 166 VSPLPSEALSKTSALKNLLYRLKVNSST--QARTVVLSSCPTSPMRTASSLRDHIYPHHP 339
           VS + + A S TS   N L  LK  S+T  Q  T    S    P+   S   ++  PH P
Sbjct: 36  VSSVSASASSSTSRPTNALQPLKPPSNTPQQLTTPPHQSNTPRPLTPPSRQSNNPRPHTP 95

Query: 340 QFLKSSSALSHTSPP 384
              +S++    T PP
Sbjct: 96  PSCQSNTPRPLTPPP 110


>SB_42820| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 312

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = +3

Query: 327 PTPPPIPEVIQRALAYL-ATAPPQPENN 407
           PTPPP PEVI R+ A L A  P  P  N
Sbjct: 172 PTPPP-PEVIYRSCAELKAARPSTPSGN 198


>SB_39563| Best HMM Match : Ctr (HMM E-Value=0.39)
          Length = 258

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 18/43 (41%), Positives = 23/43 (53%)
 Frame = +3

Query: 63  VAAPQSPTEPIPILKQESSIEPDGSYQYSYETGNGISAAERGA 191
           ++A  SPT+P  + K E SIEP+ SY  S       S   RGA
Sbjct: 195 LSAEASPTQPT-VRKAEHSIEPNPSYSKSRGKTAQASQHSRGA 236


>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
          Length = 1590

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +1

Query: 295  RTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTG 411
            RT  SLR+H  P  P  + +   L +   PHP+    +G
Sbjct: 1407 RTTESLREHARPLRPLAIGTRVFLQNQQGPHPNKWDRSG 1445


>SB_14229| Best HMM Match : VAR1 (HMM E-Value=5)
          Length = 356

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
 Frame = +1

Query: 235 VNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGH 414
           ++++ +ART VL SC T      S+                   +  +PP+  +L  +G+
Sbjct: 36  LDTAARARTPVLYSCKTPKESPQSATLATPRQKSNGAFGYKKTFNQAAPPYQKALDESGY 95

Query: 415 NYSV----NLLKKRVNSVILVEFEMPIYFLTYLSNFRYSFL 525
           NY++    N   KR N    + +  P +     +N  + FL
Sbjct: 96  NYTLHYEPNTTNKRKNRQRNIIWYNPPFSKNTSTNIGHKFL 136


>SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)
          Length = 184

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
 Frame = +3

Query: 324 LPTPPPI--PEVIQRALAYLATAPPQPENNRP 413
           LPTPPP   P+   +    L T PP+P   RP
Sbjct: 135 LPTPPPPTPPQSTPKPRRVLPTPPPKPPTPRP 166


>SB_12397| Best HMM Match : Extensin_2 (HMM E-Value=0.14)
          Length = 659

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +1

Query: 241 SSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTG 411
           +STQ +        TS     SS   H     PQ   +SSA+ HT+   P +  TTG
Sbjct: 361 TSTQTQASSTVGDTTSTQTQTSSTVGHTTSTQPQ---TSSAVDHTTSTQPQTSSTTG 414


>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1850

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 3/54 (5%)
 Frame = +3

Query: 246  YPSEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQR---ALAYLATAPPQP 398
            YPS+D    Q  Y A + G Q   S  P P P  +       A AY   AP  P
Sbjct: 1269 YPSQDAA-YQTGYPAYQQGGQAYPSAAPAPAPAAQAYPSAAPATAYPTQAPANP 1321


>SB_2431| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 61

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = +3

Query: 327 PTPPPIPEVIQRALAYLATAPP 392
           PTPPP PEVI R+ A L  A P
Sbjct: 15  PTPPP-PEVIYRSCAELKAARP 35


>SB_52435| Best HMM Match : RYDR_ITPR (HMM E-Value=1.4)
          Length = 954

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 23  EDLCYSLRTCDGRGSCTPITY*THPDP 103
           E+ C+ +RT + R +C PI   +HP+P
Sbjct: 169 EEFCHFVRT-EARTACNPIMMNSHPNP 194


>SB_42986| Best HMM Match : Glycos_transf_4 (HMM E-Value=1.5)
          Length = 279

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 28/111 (25%), Positives = 47/111 (42%)
 Frame = +1

Query: 193 SKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLRDHIYPHHPQFLKSSSALSH 372
           SKT++  ++L   KV   T   +   SS  +  +    SL        P    SSS+ S 
Sbjct: 63  SKTNSF-DVLTMTKVVFRTMRVSQTRSSSSSQSLPPPPSLSSQTSSSSPP-PSSSSSQSL 120

Query: 373 TSPPHPHSLKTTGHNYSVNLLKKRVNSVILVEFEMPIYFLTYLSNFRYSFL 525
             PP   S  ++ H++  +LL    + + +V   M    L  +S+   SF+
Sbjct: 121 PPPPSSSSQPSSHHHHHHHLLHNHNHHLFVVAINMIAAILVMISSLSSSFV 171


>SB_53344| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1554

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 355 SSALSHTSPPHPHSLKTTGHNYS 423
           SS  S++ P H HS K+ GH+++
Sbjct: 59  SSVSSYSPPKHKHSSKSNGHHHN 81


>SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 260

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +1

Query: 139 TNTLMRLEMVSPLPSEALSKTSALKNLLYRLKVNSSTQARTVVLSSCPTSPMRTASSLR 315
           T T  R +   P PS A    +       ++   +ST+ +   LSS  TS +R AS+ R
Sbjct: 165 TGTSSRTDRSRPAPSPARVNQATATQSAKKVGSTASTEKQKKELSSSSTSSLRGASARR 223


>SB_9412| Best HMM Match : Peptidase_M1 (HMM E-Value=3.1e-07)
          Length = 1844

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
 Frame = +1

Query: 133  GPTNTLMRLEMVSPLPSEALSKTSALK---NLLYRLKVNSSTQARTVVLSSCPTSPMRTA 303
            G ++T +  EMVS +PS   +     K   ++    K +SS    + V     ++P+ T+
Sbjct: 1197 GSSSTAVSKEMVSSIPSPKANVVVNCKLPSSVDVDGKRSSSPDVSSSVGEHSESNPVDTS 1256

Query: 304  SSLRDHIYPHHPQFLKSSSALSHTSPPHPHSLKTTGHNYSVNLLKK 441
            +S+ D I          S  L  ++ P P + K T    + + +KK
Sbjct: 1257 TSVFDRISTKENVASHVSRPLGGSTSPSPFTSKRTSPGLNESPMKK 1302


>SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66)
          Length = 264

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 306 QPQGSHLPTPPPIPEVIQRAL-AYLATAPPQP-ENNRP 413
           +PQ SH P  PP P+   R L ++    P +P E++RP
Sbjct: 151 RPQESHRPLEPPRPQEQHRPLESHRPLEPTRPQESHRP 188


>SB_17683| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 907

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 24/76 (31%), Positives = 32/76 (42%)
 Frame = +3

Query: 105 KQESSIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALQVEGQFQYPSEDGGTIQLSY 284
           K+  S E + S Q SYE  N ISA+    +      +PA+Q E    + S   G   L+ 
Sbjct: 172 KEFVSQEQNDSGQPSYEVKNPISASGSQGIPPGKVLQPAVQAEDHSSFLSGTSGNTILAG 231

Query: 285 IANENGFQPQGSHLPT 332
             N      Q S  PT
Sbjct: 232 APNFMFPAQQSSGEPT 247


>SB_26931| Best HMM Match : Pepsin-I3 (HMM E-Value=2.2)
          Length = 291

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
 Frame = +1

Query: 358 SALSHTSPPHPHSLKTTGHNY-------SVNLLKKRVNSVILVEFEMPIYF 489
           ++   T+PP+  +L  +G+NY       +V   K R  + IL +F+M ++F
Sbjct: 175 ASFDQTAPPYQKALDDSGYNYTLRYEPNTVTNHKTRKRNNILCDFKMSLWF 225


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,408,175
Number of Sequences: 59808
Number of extensions: 407491
Number of successful extensions: 1508
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1315
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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