Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_B06
(1001 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 32 0.64
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 31 1.5
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 30 2.6
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 32.3 bits (70), Expect = 0.64
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 498 EKDVLKITFPLKXK-QPEDSKRPVAEPTETTPTNVSREEMEFXTESNVRDVDVRLETAQ 671
E+ K T PL + +PE+ +R PT+ PT + R E T+ + + +E+A+
Sbjct: 343 ERPTKKPTKPLLPEVEPEEEERATPRPTKAKPTTIKRRPTERPTKKPTKPLLPEVESAE 401
Score = 32.3 bits (70), Expect = 0.64
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 501 KDVLKITFPLKXKQPEDSKRPVAEPTETTPTNVSREEMEFXTE 629
K K P + ++ E+ +RP +PT+ PT + R E T+
Sbjct: 427 KKTTKPLLPEEEEEEEEEERPTPKPTKAKPTTIKRRPTEIPTK 469
Score = 28.7 bits (61), Expect = 7.8
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 498 EKDVLKITFPLKXK-QPEDSKRPVAEPTETTPTNVSREEMEFXTE 629
E+ K T PL + +PE+ +R PT+ PT + R E T+
Sbjct: 180 ERPTKKPTKPLLPEVEPEEEERATPRPTKAKPTTMKRRPTERPTK 224
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXPL 941
P PP P PP P PP PP PL
Sbjct: 464 PPPPPPPPPPPPPPPPPPPPPPPPFPPPPPPTPL 497
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 30.3 bits (65), Expect = 2.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P +PP P PP P PP PP P
Sbjct: 385 PPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPP 403
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPP 408
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPP 412
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 386 PPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 392 PPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 393 PQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 395 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 397 PPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPP 430
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.5 bits (63), Expect = 4.5
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXPLSSXGXXGXP 968
P PP P PP P P P P+ G G P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPPPPSTPPVQQSGAPGSP 725
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 840 PXXAPPXPXXPPXXXPXXXPPXXXXXXXPPXXP 938
P PP P PP P PP PP P
Sbjct: 178 PYPPPPNPPYPPPPNPPYPPPPNAPNPPPPNPP 210
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,929,947
Number of Sequences: 59808
Number of extensions: 507176
Number of successful extensions: 1840
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1746
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2991217451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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