Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP01_F_A19
(880 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 114 1e-25
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 7e-21
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 76 3e-14
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 73 4e-13
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 72 7e-13
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 69 4e-12
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 68 1e-11
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 67 2e-11
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 66 4e-11
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 42 5e-04
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 42 7e-04
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 41 0.001
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 38 0.011
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 38 0.011
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 36 0.033
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_38186| Best HMM Match : TrfA (HMM E-Value=1.4) 31 1.2
SB_50660| Best HMM Match : DUF479 (HMM E-Value=1.6) 30 2.1
SB_38415| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058) 29 3.7
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 29 3.7
SB_20508| Best HMM Match : Filament (HMM E-Value=0.037) 29 3.7
SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8) 29 3.7
SB_48726| Best HMM Match : E1-E2_ATPase (HMM E-Value=7.7e-07) 29 5.0
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 29 5.0
SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_24643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 114 bits (274), Expect = 1e-25
Identities = 52/100 (52%), Positives = 72/100 (72%)
Frame = +1
Query: 109 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLA 288
M++L +AL+ LA +E+ EE+VLVL++ NF+ ++ +++LVEFYAPWCGHCK+LA
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEFYAPWCGHCKALA 60
Query: 289 PEYAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIP 408
PEYAKAA +L E+S IKLAKVDAT E L + + P
Sbjct: 61 PEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYP 100
Score = 72.1 bits (169), Expect = 5e-13
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = +3
Query: 429 NGSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELIDANTVIVFGFFSDQSSARA 608
+G P +Y+GGR A +I+SWL KKTGPPA ++ +A+ K+ I V V GFF+D+ S A
Sbjct: 107 DGKPSEYAGGRTAPEIVSWLNKKTGPPAKDLATADAMKDFI-TKEVAVVGFFTDKESDAA 165
Query: 609 KTFLS 623
K FLS
Sbjct: 166 KAFLS 170
Score = 56.4 bits (130), Expect = 3e-08
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = +1
Query: 94 ADNIAMRVLIFTAIALLGLALGDEVPTE---ENVLVLSKANFETVISTTEY-ILVEFYAP 261
++N+ V F L L E+P + + V VL NF+ V + + VEFYAP
Sbjct: 353 SENVKEFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAP 412
Query: 262 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQ 372
WCGHCK LAP + + K ++ + I +AK+D+T +
Sbjct: 413 WCGHCKQLAPIWDQLGEKY-KDHADIVVAKMDSTANE 448
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +3
Query: 432 GSPIDYSGGRQADDIISWLK---KKTGPPAVE 518
G +DY+GGR DD + +L+ K PA E
Sbjct: 467 GEAVDYNGGRTLDDFVKFLESGGKAGNEPAAE 498
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 98.3 bits (234), Expect = 7e-21
Identities = 45/89 (50%), Positives = 58/89 (65%)
Frame = +1
Query: 160 DEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPI 339
DEV E++V VL+ NF+ VI ILVEFYAPWCGHCKSLAPEYAKAA K+ + P+
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPV 114
Query: 340 KLAKVDATQEQDLXRELRCTRIPDSQILQ 426
AK+DAT D+ + + P +I +
Sbjct: 115 PFAKMDATVASDIAQRFDVSGYPTLKIFR 143
Score = 85.0 bits (201), Expect = 7e-17
Identities = 39/86 (45%), Positives = 53/86 (61%)
Frame = +1
Query: 169 PTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 348
P L L+K NF V++ +LVEF+APWCGHCK LAPEY KAA +L + + PI LA
Sbjct: 173 PPPVAALTLTKENFTEVVNRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLA 232
Query: 349 KVDATQEQDLXRELRCTRIPDSQILQ 426
VDAT E +L ++ P ++ +
Sbjct: 233 IVDATIESELAQKYEVQGYPTLKVFR 258
Score = 41.5 bits (93), Expect = 9e-04
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 175 EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKV 354
E +V+ K E V + +L+EFYAPWCG +L P + K +++ I +AK+
Sbjct: 525 EPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCG--IALEPTFKKLGKHFRNDKN-IVIAKI 581
Query: 355 DAT 363
DAT
Sbjct: 582 DAT 584
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 432 GSPIDYSGGRQADDIISWLKKKTGPPAVEVTSAEQAKELI-DANTVIVFGFFSDQSSARA 608
G +Y G R I S+++ + GP + ++S + ++ + + + V + GFF +
Sbjct: 260 GKATEYKGQRDQYGIASYMRSQVGPSSRILSSLKAVQDFMKEKDDVTIMGFFDGEDDKML 319
Query: 609 KTFLSTGS 632
+++L +
Sbjct: 320 ESYLEANN 327
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +3
Query: 432 GSPIDYSGGRQADDIISWLKKKTG-----PPAVEVT-SAEQAKELIDANTVIVFGFFS 587
G+P +Y G R+ I+ ++KK++ PP +T + E E+++ ++++ FF+
Sbjct: 145 GTPYEYEGPREESGIVEYMKKQSDPNWKPPPVAALTLTKENFTEVVNRESLMLVEFFA 202
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 76.2 bits (179), Expect = 3e-14
Identities = 32/62 (51%), Positives = 45/62 (72%)
Frame = +1
Query: 181 NVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDA 360
+VL L +NF++ ++ + +LVEF+APWCGHCK LAPEY AA L + + P+ LAKVD
Sbjct: 539 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDC 598
Query: 361 TQ 366
T+
Sbjct: 599 TE 600
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +1
Query: 184 VLVLSKANFETVIST-TEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDA 360
V V+ NF+ +++ T+ +L+EFYAPWCGHCKSL P+Y + KL ++ I +AK+DA
Sbjct: 864 VKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGEKL-QDVKDIVIAKMDA 922
Query: 361 TQEQDLXRELRCTRIPDSQILQGMAVLSTIQVVV 462
T P + +QG+ ++S I +++
Sbjct: 923 TAND----------APPNFSVQGIIIISIIGIII 946
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +3
Query: 444 DYSGGRQADDIISWLKKKTGPPAVEVTSAEQ-AKELIDANTVIVFGFFSDQSSARAKTFL 620
DY G R + II ++KK+ GP +VE+ S + K+L DA + +V GF + F+
Sbjct: 628 DYDGPRDSSGIIRYMKKQAGPSSVEIKSVDHLEKKLDDAESNVVVGFLDGDDDLK-NAFM 686
Query: 621 STGS 632
T +
Sbjct: 687 RTAN 690
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +2
Query: 389 YGVRGYPTLKFFR 427
YGV GYPTLK FR
Sbjct: 609 YGVSGYPTLKIFR 621
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 72.5 bits (170), Expect = 4e-13
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +1
Query: 160 DEVP---TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEE 330
DE P T V+ L F+ ++ +LV FYAPWCGHCK++ PEY AA L E+E
Sbjct: 73 DEKPWSDTPSEVVHLRDDMFDDFVAKNPSVLVMFYAPWCGHCKAMKPEYVDAAQTLKEQE 132
Query: 331 SPIKLAKVDATQEQDLXRELRCTRIP 408
P LA VDAT+E L + + P
Sbjct: 133 IPGVLAAVDATKEAALGKRFKVEGYP 158
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/49 (46%), Positives = 31/49 (63%)
Frame = +1
Query: 163 EVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAA 309
E+P+E V LS F++ + +++LV FYAPWCGHCK PE AA
Sbjct: 192 EIPSE--VYHLSDTTFKSFVKKKKHVLVMFYAPWCGHCKKAKPELMSAA 238
Score = 33.1 bits (72), Expect = 0.30
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 238 ILVEFYAPWCGHCKSLAPEYAKAATKLAEE 327
+++ Y CG+CK PE+A AAT+ +E
Sbjct: 2 VVIVLYIAGCGYCKRFKPEFAAAATEHKDE 31
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 71.7 bits (168), Expect = 7e-13
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +1
Query: 172 TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 351
T+ V+ L+K NF+ V++ ++ LVEFYAPWCGHCK LAP Y + + + S + +AK
Sbjct: 20 TQGKVIDLTKDNFDEVVNGEKFALVEFYAPWCGHCKQLAPTYEQLG-EAYTQSSDVIIAK 78
Query: 352 VDATQEQDL 378
VDA ++DL
Sbjct: 79 VDADGDRDL 87
Score = 31.5 bits (68), Expect = 0.93
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 426 GNGSPIDYSGGRQADDIISWLKKKTG 503
G+ +P +Y+GGR +D I ++++KTG
Sbjct: 105 GSTTPEEYNGGRDINDFIKFIEEKTG 130
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 69.3 bits (162), Expect = 4e-12
Identities = 29/57 (50%), Positives = 41/57 (71%)
Frame = +1
Query: 181 NVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 351
+VL L +NF++ ++ + +LVEF+APWCGHCK LAPEY AA L + + P+ LAK
Sbjct: 14 DVLDLGDSNFKSGVAGKDIMLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAK 70
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/64 (50%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = +1
Query: 175 EENVLVLSKANFET-VISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 351
+E+V+ L+ NFE V+++ + LVEF+APWCGHC+ LAPE+AKAAT+L + +K+
Sbjct: 78 KEDVVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATEL---KGKVKVGA 134
Query: 352 VDAT 363
+DAT
Sbjct: 135 LDAT 138
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Frame = +3
Query: 444 DYSGGRQADDIISWLKKKTG-----PPAVEVTSAEQAKELIDANTVIVFGFFS---DQSS 599
DY GGR A DII + K P ++ S E KE + + + V F D +
Sbjct: 170 DYQGGRTASDIIQYALDKAADSIEPPEVIQAISNEVLKEGCNEHPICVIAFLPHILDSGA 229
Query: 600 ARAKTFLS 623
+ T+L+
Sbjct: 230 SGRNTYLA 237
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 67.3 bits (157), Expect = 2e-11
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Frame = +1
Query: 148 LALGDEVPTEENVLV-LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATK-LA 321
L D VP +E L+ L +NFE + +++LV+FYAPWC HCK +AP+Y A + L
Sbjct: 123 LMASDGVPDDEPTLLELDDSNFEPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDVAKELLI 182
Query: 322 EEESPIKLAKVDAT 363
+ ++LAKVD +
Sbjct: 183 LSHNSVRLAKVDCS 196
Score = 60.5 bits (140), Expect = 2e-09
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +1
Query: 169 PTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 348
P VL L+ NF I EY+LV+FYAPWC C+ L+P + AA +L + ++ A
Sbjct: 48 PASPAVLNLNDQNFNETIKKNEYVLVDFYAPWCSDCQRLSPLFDTAALQLRDNNPSLRFA 107
Query: 349 KV 354
KV
Sbjct: 108 KV 109
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 66.1 bits (154), Expect = 4e-11
Identities = 29/88 (32%), Positives = 48/88 (54%)
Frame = +1
Query: 145 GLALGDEVPTEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 324
G D + V+ L+ + + I + E +LV ++APWCGHC + P Y KAA L +
Sbjct: 39 GYPTSDWSKDDSKVVFLTDESHDEFIKSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHD 98
Query: 325 EESPIKLAKVDATQEQDLXRELRCTRIP 408
E++ LA VD T+ +D+ +++ P
Sbjct: 99 EDANCNLAAVDCTKHKDVAKKVALAGYP 126
Score = 61.3 bits (142), Expect = 1e-09
Identities = 29/70 (41%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Frame = +1
Query: 175 EENVLV--LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLA 348
E++ LV L ++F ++ TE++LV FYAPWCGHCK+ P+Y KAA ++ + + A
Sbjct: 144 EDSSLVKQLDGSDFWGYLNNTEHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRV-FA 202
Query: 349 KVDATQEQDL 378
K+D T+ D+
Sbjct: 203 KLDCTKFGDV 212
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = +1
Query: 193 LSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDAT 363
L+ NF+ +I + +LV+FYAPWC HC+ L P+ AA LA + + AKVD T
Sbjct: 25 LNAQNFDQMIREKDIMLVDFYAPWCHHCQELLPQLEGAANALA-AKGLFQFAKVDCT 80
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 54.0 bits (124), Expect = 2e-07
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +1
Query: 175 EENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEE 327
E + L+ +F+ + E +LV+FYAPWC C +L P+Y KAA LA+E
Sbjct: 21 ENPIFELTDQDFDNFLKDKEVMLVDFYAPWCSDCDNLRPKYEKAARDLAKE 71
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +1
Query: 190 VLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE 369
V SK F V+++ + +V+FYAPWCG C AP+Y + A L + ++ AKV+ Q+
Sbjct: 438 VNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKML---KGKVRAAKVNCEQD 494
Query: 370 QDLXRELRCTRIPDSQILQG 429
L E P ++ G
Sbjct: 495 YGLCSEANIHSYPTVRLYLG 514
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +1
Query: 148 LALGDEVPTEENVLVLSKANF-ETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAE 324
+AL + NV L +F +V S + V+F+APWC C L PEY KAA
Sbjct: 274 IALFAKESVSSNVHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVG 333
Query: 325 EESPIKLAKVDATQEQDLXRELRCTRIP 408
+ P+ VD T L + P
Sbjct: 334 K--PVGFGTVDCTVHSQLCHQYNIRSYP 359
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 45.2 bits (102), Expect = 7e-05
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Frame = +1
Query: 199 KANFETVISTTE--YILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQ 366
+A F +VI+ T+ ++++FYA WCG C+ + P++ K A EE + AK+D +
Sbjct: 18 RAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMA---LEEFKDVFFAKIDVDE 72
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 42.3 bits (95), Expect = 5e-04
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 211 ETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLXREL 390
+ VI+ + +L+ FY PWCG C + AP A + ++ S + + ++DA Q DL L
Sbjct: 529 DIVINNDQDVLLVFYTPWCGMCINFAP-VLLAVARFFQDISQVSVTRIDADQ-NDLPWNL 586
Query: 391 RCTRIP 408
+ P
Sbjct: 587 TVSSYP 592
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 41.9 bits (94), Expect = 7e-04
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Frame = +1
Query: 181 NVLVL---SKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 351
NV VL S+ E + T+ ++ +F A WCG CKS+AP Y + L+E+ K
Sbjct: 8 NVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVY----SGLSEKYKQAVFLK 63
Query: 352 VDATQEQDLXRELRCTRIPDSQILQGMAVLSTIQ 453
+D Q+L + T +P Q + + ++
Sbjct: 64 IDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVR 97
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1
Query: 172 TEENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 351
+E V +L+K F+ I + V+FYAPWC HC LAP + + A ++ + I ++K
Sbjct: 88 SEAGVHILTKNTFDKHIELGLHF-VKFYAPWCIHCIKLAPIWERLAEDF-KDNADITISK 145
Query: 352 VD 357
++
Sbjct: 146 IN 147
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 37.9 bits (84), Expect = 0.011
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 208 FETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 357
F+ + E ++F A WCG C+ + P++ ++A+E +K AKVD
Sbjct: 4 FDKFLKDNEVAAIDFTATWCGPCRMIGPKF----EEMAKEFKGVKCAKVD 49
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 37.9 bits (84), Expect = 0.011
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 181 NVLVLSKANFETVI---STTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAK 351
NV+V+ +F +V + + ++++F A WCG CKS+AP + + K + + K
Sbjct: 9 NVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMD----VVFLK 64
Query: 352 VDATQEQ 372
VD Q Q
Sbjct: 65 VDVDQCQ 71
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 36.3 bits (80), Expect = 0.033
Identities = 15/77 (19%), Positives = 38/77 (49%)
Frame = +1
Query: 178 ENVLVLSKANFETVISTTEYILVEFYAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 357
+ ++ + N + + ++++ + FYAPW HC+ + + + A + A+ + I + K +
Sbjct: 26 KKIVEFTNENVDEYVDGSKFVFIFFYAPWDDHCQRILQIFDQVADEFADRDD-IVVGKSN 84
Query: 358 ATQEQDLXRELRCTRIP 408
A ++ + R P
Sbjct: 85 AYEDVKIATRYWIDRYP 101
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 333 SYQTSES*RNSRTGSRPRATVYEDTRLSNSSGNGSPIDYSGGRQADDII 479
+Y ES R S G+ A+V D +NSSG+G P R DD++
Sbjct: 6618 NYDGKESGRESTEGTDGIASVITDNFANNSSGSGDPDSLRAQRTRDDLV 6666
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +1
Query: 262 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIPDSQILQGMAVL 441
WC CK L P + +AE++ + LAKVD +L +P ++G V+
Sbjct: 2 WCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVI 58
Query: 442 STIQVVVK 465
+ + VV+
Sbjct: 59 NKFEGVVE 66
>SB_42614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 370 VLELRQLSLV**EILLQPALWLPWRIPAPETCSGRTME 257
+ E RQLS+ E+L P LPW + AP+ C +T +
Sbjct: 158 IAEARQLSMK--EVLFHPLGPLPWSLAAPDGCLKKTQK 193
>SB_38186| Best HMM Match : TrfA (HMM E-Value=1.4)
Length = 429
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 370 VLELRQLSLV**EILLQPALWLPWRIPAPETCSGRTME 257
+ E RQLS+ E+L P LPW + AP+ C +T +
Sbjct: 148 IAEARQLSMK--EVLFHPLGPLPWSLAAPDGCLKKTQK 183
>SB_50660| Best HMM Match : DUF479 (HMM E-Value=1.6)
Length = 730
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 370 VLELRQLSLV**EILLQPALWLPWRIPAPETCSGRTME 257
+ E RQLS+ E+L P LPW + AP+ C +T +
Sbjct: 628 IAEARQLSMK--EVLSHPLGPLPWSLAAPDGCLKKTQK 663
>SB_38415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 837
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 370 VLELRQLSLV**EILLQPALWLPWRIPAPETCSGRTME 257
+ E RQLS+ E+L P LPW + AP+ C +T +
Sbjct: 156 IAEARQLSIK--EVLSHPLGPLPWSLAAPDGCLKKTQK 191
>SB_13271| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 39
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 181 NVLVLSKANFETVISTTEYILVEFYA 258
NV++L + NF+ VI+ + + V FYA
Sbjct: 12 NVVILDEGNFDKVIAENKLVFVNFYA 37
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 256 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTRIPDSQILQGMA 435
A WC CK L P + +AE++ + LAKVD +L +P ++G
Sbjct: 46 ACWCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102
Query: 436 VLSTI 450
V+ +
Sbjct: 103 VMEHV 107
>SB_28181| Best HMM Match : RVP (HMM E-Value=0.00058)
Length = 664
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 244 VEFYAPWCGHCKSLAPEYAKAATKL 318
V FYAPWCG + E+ AA+ L
Sbjct: 457 VFFYAPWCGQSRRAVEEFNIAASLL 481
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1
Query: 205 NFETVISTTEYIL--VEFYAPWCGHCKSL 285
+F+ ++S++ +L V F+APW HC +
Sbjct: 11 DFDRILSSSSNVLAVVHFFAPWAPHCNQM 39
>SB_20508| Best HMM Match : Filament (HMM E-Value=0.037)
Length = 722
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 310 TKLAEEESPIKLAKVDATQEQDLXRELRCTRIPDSQILQGMAVLSTIQV 456
T+LA+E K+A + +QE+DL +EL + + +QG + Q+
Sbjct: 364 TRLAKELEETKIAMEELSQERDLMKELADAKDIEVSAIQGQITDKSSQI 412
>SB_4831| Best HMM Match : E-MAP-115 (HMM E-Value=1.8)
Length = 1151
Score = 29.5 bits (63), Expect = 3.7
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +3
Query: 324 RRISYQTSES*RNSRTGSRPRATVYEDTRLSNSSGN--GSPIDYSGGRQADDIISWLKKK 497
R+ + TSE G R ++ T++ +SSGN +P++ SG A S ++
Sbjct: 958 RQKLFDTSEVLAKDSLGRVARGSLRSTTKMVDSSGNKRPNPVEESGRSSAK---SKSRRN 1014
Query: 498 TGPPAVEVTSAEQAKELIDANTVIVFGFFSDQSSARAKT 614
+GP +S D N + F S Q + R+++
Sbjct: 1015 SGPQRPSASSLASGSSCTD-NLQTISEFSSPQMTRRSRS 1052
>SB_48726| Best HMM Match : E1-E2_ATPase (HMM E-Value=7.7e-07)
Length = 592
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +1
Query: 283 LAPEYAKAATKLAEEESPIK---LAKVDATQEQDLXRELRCTRIPDSQILQGMAVLSTIQ 453
+A + A A L+E E+ I +K + DL RE RC + + MA+ S +Q
Sbjct: 499 MALKAAYAGISLSEAEASIASPFTSKTLSLTPFDLAREGRCALVTSFACFKYMALYSIVQ 558
Query: 454 VVVKLMTSSVG 486
V L+ S+G
Sbjct: 559 FVSVLILYSIG 569
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +1
Query: 262 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQD 375
WCG CK+L P++A+ + ++A+ + + +E D
Sbjct: 8 WCGACKALRPKFAE-SKEVAQLSKKFVMVHLQENEEPD 44
>SB_39140| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = -1
Query: 643 HQQLEPVERKVLALAELWSEKKPNTITVLASISSLACSADVTSTA------GGPVFFFSQ 482
+QQL P +R + E +EK P+ + + L C D ++ GG F F Q
Sbjct: 374 NQQLGPGQRNMQNQLEFMNEKFPSDLELDCFEGELECDMDTIISSELNMGDGGFDFNFEQ 433
Query: 481 LMMSSA*RPP 452
L+ S+ PP
Sbjct: 434 LVASAPNNPP 443
>SB_24643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 274 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTR 402
C+SLA E A KLA E + L +++ T Q + R TR
Sbjct: 39 CRSLAGESASELKKLAAENQNLHLLELEVTDFQAIQRCAEQTR 81
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 274 CKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLXRELRCTR 402
C+SLA E A KLA E + L +++ T Q + R TR
Sbjct: 39 CRSLAGESASELKKLAAENQNLHLLELEVTDFQAIQRCAEQTR 81
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,891,726
Number of Sequences: 59808
Number of extensions: 387895
Number of successful extensions: 1123
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2502612210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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