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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_A05
         (1023 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.65 
SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)              32   0.86 
SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29)                  32   0.86 
SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)                      31   1.1  
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)                  31   1.1  
SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_11420| Best HMM Match : MBOAT (HMM E-Value=6.9e-06)                 31   1.1  
SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)                   31   1.5  
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)                31   2.0  
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)                   31   2.0  
SB_8116| Best HMM Match : FIVAR (HMM E-Value=8.6)                      31   2.0  
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)                 31   2.0  
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   2.0  
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)              31   2.0  
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)                 31   2.0  
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)                   30   2.6  
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)                  30   2.6  
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)               30   2.6  
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.5  
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.5  
SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)            30   3.5  
SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.5  
SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)                  30   3.5  
SB_43660| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.5  
SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   3.5  
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)                 29   4.6  
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)               29   4.6  
SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)                     29   4.6  
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)              29   6.0  
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   6.0  
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)               29   6.0  
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.0  
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.0  
SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.0  
SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)                   29   8.0  
SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.0  
SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.0  
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.0  
SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027)                  29   8.0  
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)                   29   8.0  
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   8.0  

>SB_50455| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 89

 Score = 32.3 bits (70), Expect = 0.65
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +1

Query: 166 TLTQETATNLLTTART--SLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLSLV 336
           T+T    TN  TT  T  + I+  TTT+  T T ++TT+  T T     +T+++  +++
Sbjct: 8   TVTTTIITNATTTIITLSTTIITTTTTITTTTTTITTTITPTITTTTTIITTTITTTII 66


>SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)
          Length = 888

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 21/60 (35%), Positives = 26/60 (43%)
 Frame = +1

Query: 127 LWPTLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKAD 306
           L+PT   P R + T T  T   L  T RT   LP T +   T  + + T     TLP  D
Sbjct: 139 LYPTQSAPYRLYPTQTVRTIQTLPNTVRTIQTLPSTDSAHRT-DHPTQTESTVQTLPSTD 197


>SB_3546| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-29)
          Length = 447

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +3

Query: 165 NADSGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPG 335
           NA   NG  P +  P+   PP  Y P  NG +P+    Y+  P  G+P +   PF G
Sbjct: 309 NAPPFNGQPPYNTPPFNGQPPY-YTPPFNG-QPL----YHTPPFNGQPPYNTPPFNG 359



 Score = 29.1 bits (62), Expect = 6.0
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
 Frame = +3

Query: 183 GYEPIDNRPYIVNPPKDYN-PNGNGYEPID----NG--AYYVDPPQGRPYFKPTPFPG 335
           G  P +  P+   PP  YN P  NG  P +    NG   YY  P  G+P +   PF G
Sbjct: 293 GQPPYNAPPFTGQPP--YNAPPFNGQPPYNTPPFNGQPPYYTPPFNGQPLYHTPPFNG 348


>SB_45599| Best HMM Match : GRP (HMM E-Value=0.22)
          Length = 595

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/19 (68%), Positives = 13/19 (68%)
 Frame = -1

Query: 915 PRXRRXGGGXXXGFGGGGG 859
           PR RR GGG   G GGGGG
Sbjct: 509 PRRRRGGGGGGGGGGGGGG 527


>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
          Length = 1080

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/19 (68%), Positives = 13/19 (68%)
 Frame = -1

Query: 915  PRXRRXGGGXXXGFGGGGG 859
            PR RR GGG   G GGGGG
Sbjct: 998  PRRRRGGGGGGGGGGGGGG 1016


>SB_14296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1141

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 166 TLTQETATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTLPKADLTSSLPLSLVLA 342
           T  + T  +L TTA  +   P+TTT  + T    +TT  +  T P+A  T+SL  +  LA
Sbjct: 561 TAPEATTASLATTAPEATTAPETTTALLVTTAPETTTASLVTTAPEA-TTASLATTASLA 619

Query: 343 VGSKE 357
             + E
Sbjct: 620 TTAPE 624



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +1

Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSL 321
           T  + T  +L+TTA  +   P+TTT  E  T   TT     T      T+SL
Sbjct: 134 TAPEATTASLVTTAPEATTAPETTTAPEATTAPETTTASLVTTAPETTTASL 185



 Score = 29.5 bits (63), Expect = 4.6
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = +1

Query: 166 TLTQETATNLLTTARTSLILPKTTTL-METATNLSTTVHITWTLPKADLTSSLPLSLVLA 342
           T  + T  +L TTA  +   P+TTT  + T    +TT  +  T P+A  T+SL  +   A
Sbjct: 519 TAPETTTASLATTAPETTTAPETTTASLATTAPETTTASLVTTAPEA-TTASLATTAPEA 577

Query: 343 VGSKEYLXKLI 375
             + E    L+
Sbjct: 578 TTAPETTTALL 588


>SB_11420| Best HMM Match : MBOAT (HMM E-Value=6.9e-06)
          Length = 628

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 860 PPPPPKPXXXPPPXLLXR 913
           PPPPP P   PPP +L R
Sbjct: 211 PPPPPPPPPPPPPPMLAR 228



 Score = 31.5 bits (68), Expect = 1.1
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 860 PPPPPKPXXXPPPXLLXRGXXP 925
           PPPPP P   PPP L  R   P
Sbjct: 212 PPPPPPPPPPPPPMLARRWYYP 233


>SB_356| Best HMM Match : zf-C3HC4 (HMM E-Value=0.06)
          Length = 587

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = +1

Query: 160 WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWT 291
           + T+   T T   TT  T+ I   TTT   T TN +TTV+ T T
Sbjct: 538 YTTIVTITITTNYTTTVTTTITNYTTTFTITITNYTTTVNTTIT 581


>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
          Length = 839

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 199 TTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSS 318
           T A  + + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 229 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 267


>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
          Length = 1052

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 860 PPPPPKPXXXPPPXLLXRGXXP 925
           PPPPP P   PPP    RG  P
Sbjct: 196 PPPPPGPGGIPPPPPPIRGGVP 217


>SB_8116| Best HMM Match : FIVAR (HMM E-Value=8.6)
          Length = 127

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = +1

Query: 160 WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHIT 285
           W T T  T T   TT  T+     TTT  +T T  +TT  IT
Sbjct: 53  WTTTTTSTITT--TTTTTTTTKTTTTTTTKTTTTTATTTEIT 92


>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
          Length = 258

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/44 (38%), Positives = 17/44 (38%)
 Frame = -2

Query: 1019 GXXXGXGVXGXXGERXGXWXXXGXXRGXXKXXXVGPXGGGXGGG 888
            G   G G  G  G R G     G  RG       G  GGG GGG
Sbjct: 141  GYRSGGGYRGGGGYRGGGGGYRGRGRGGGGYGGGGYGGGGYGGG 184


>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 290

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 19/52 (36%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
 Frame = +3

Query: 186 YEPIDNRPYIVNPPKDYNPNGNG-YEPIDNGAY--YVDPPQGRPYFKPTPFP 332
           Y P  N PY   P   Y P  N  Y P  N  Y    +PP   P + P P P
Sbjct: 116 YPPPPNAPYPPPPNPPYPPPPNAPYPPSPNAPYPPPPNPPYPPPLYPPPPNP 167


>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
          Length = 3094

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 199  TTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSS 318
            T A  + + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 2291 TDAPATTLAPKTTTALETTVEAKTTV-VPETTPALETTSA 2329



 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +1

Query: 172 TQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSS 318
           ++ T     T A  + + PKTTT +ET     TTV +  T P  + TS+
Sbjct: 767 SETTVAPETTDAPATTLAPKTTTALETTVAAKTTV-VPETTPALETTSA 814


>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
          Length = 305

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 860 PPPPPKPXXXPPPXLLXRGXXP 925
           PPPPP P   PPP +L     P
Sbjct: 196 PPPPPPPPPPPPPPILELAAPP 217



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 860 PPPPPKPXXXPPPXLLXRGXXPXXS 934
           PPPPP P   PPP L      P  S
Sbjct: 197 PPPPPPPPPPPPPILELAAPPPPGS 221



 Score = 28.7 bits (61), Expect = 8.0
 Identities = 17/67 (25%), Positives = 19/67 (28%)
 Frame = +3

Query: 807  PPATAXXPXXXSSXXXXXXXXXQNXXXPPPXXSSXGAXXPPFXXPAXXXXXXPXPAPLAX 986
            PP     P    S              PPP  +      PP    A      P P P+A 
Sbjct: 113  PPRAPETPSQAPSPPPPPTSPATRAPPPPPPIAPATGGPPPPPPIAPATGGPPPPPPIAP 172

Query: 987  TXTYPXP 1007
              T P P
Sbjct: 173  AATVPAP 179


>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
          Length = 739

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 857 SPPPPPKPXXXPPPXLLXRG 916
           +PPPPP P   PPP  L  G
Sbjct: 210 APPPPPPPFGAPPPPALNGG 229


>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
          Length = 457

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 857 SPPPPPKPXXXPPP 898
           SPPPPP+P   PPP
Sbjct: 388 SPPPPPQPPPPPPP 401



 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 857 SPPPPPKPXXXPPPXL 904
           +PPPPP P   PPP L
Sbjct: 419 APPPPPPPPPPPPPAL 434


>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
          Length = 3445

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +1

Query: 142  KTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTT 273
            K P+   KT    TAT   T A  + + P+TT + ET   L TT
Sbjct: 1682 KAPVDQLKTKQPTTATAKTTAAPETTVAPETTVVPETTPALETT 1725


>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 145

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = +3

Query: 888  PPPXXSSXGAXXPPFXXPAXXXXXXPXPAPLAXTXTYPXPXP 1013
            PPP  ++  A  PP   PA      P PAP       P P P
Sbjct: 65   PPPPAAAPAAPPPPAAPPAAPPPPPPLPAP-PPPPAQPAPQP 105


>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1066

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 860 PPPPPKPXXXPPPXLLXRGXXP 925
           PPPPP P   PPP     G  P
Sbjct: 872 PPPPPPPPPPPPPPASSTGSTP 893


>SB_42229| Best HMM Match : Na_H_Exchanger (HMM E-Value=3.9)
          Length = 678

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = +1

Query: 181 TATNLLTTART-SLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAV 345
           T  +L+T   T  L++  T  L+   T +   V IT TLP   +T+ LPL ++  +
Sbjct: 278 TILHLVTITTTLPLVVITTILLLVVITTILPLVAITTTLPLVAITTILPLVVITTI 333


>SB_18179| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 194

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTT 273
           T+T  TAT   TT  T+     TTT   T T  +TT
Sbjct: 28  TITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT 63



 Score = 28.7 bits (61), Expect = 8.0
 Identities = 17/50 (34%), Positives = 20/50 (40%)
 Frame = +1

Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 315
           T T  T T   TTA  +     TTT   T T  +TT   T T      T+
Sbjct: 14  TTTTTTTTTAATTATITTATATTTTTTTTTTTTTTTTTTTTTTTTTTTTT 63


>SB_51906| Best HMM Match : DUF1621 (HMM E-Value=0.22)
          Length = 266

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/53 (28%), Positives = 33/53 (62%)
 Frame = +1

Query: 187 TNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLAV 345
           TN++TT+ T++I   T T+  T T ++ T+ IT T+    +T ++ +++ + +
Sbjct: 168 TNIITTSNTNIITTTTITITITIT-ITITITITITI-TITITITITITITITI 218


>SB_43660| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 162

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
 Frame = +1

Query: 139 LKTPLR*WKTLTQETAT-NLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 315
           L TP+    T+T  T T   +TT  T++ +  TTT+  T T   TT   T T    D   
Sbjct: 12  LGTPITTITTITVTTITVTTITTTITTITITTTTTITITITITITTTITTITTTTGDPLE 71

Query: 316 SL--PLSLVLAV 345
           S     SL LAV
Sbjct: 72  STCRHASLALAV 83


>SB_8632| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1296

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = +1

Query: 163 KTLTQETATNLLTTARTSLILPKTTTLMETA-TNLSTTVHITWTLPKADLTSSLPLSLVL 339
           +T   +TAT+  T   TS +L  +T L+ T  T+ +T+ H+T       LTS+  ++ V+
Sbjct: 432 RTTVTDTATS--TAVVTSTVLVASTRLLSTVKTHTATSTHVTTATSTDTLTSTAIVTSVM 489


>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1506

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +1

Query: 169  LTQETATNLLTTARTSLILPKTTTLMETATNLSTTVH---ITWTLPKADLTSSLPL 327
            +T    T ++TT  T+ I+  T T   T T ++TTV    IT T+    +T++ P+
Sbjct: 1080 ITTTITTTIITTTITTTIITTTITTTITTTIITTTVTTTIITTTITTTIITTTDPI 1135


>SB_1235| Best HMM Match : Astacin (HMM E-Value=0.0024)
          Length = 249

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +1

Query: 136 TLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 315
           T  T +    T T   +T + TT  T+ I   TTT+  TA  +STT   T T     +T+
Sbjct: 94  TTTTTITTTTTTTTTISTTISTTTTTTTISTTTTTI--TAVIISTTTTTTSTANTTTITA 151

Query: 316 SL 321
           ++
Sbjct: 152 TI 153



 Score = 29.5 bits (63), Expect = 4.6
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = +1

Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLSLVLA 342
           T T  TA  +++T  T+     TTT+  T T  +TT+ IT T+     T +  ++  ++
Sbjct: 125 TTTTITAV-IISTTTTTTSTANTTTITATITTTTTTITITATITTITTTITATITTTIS 182


>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
          Length = 1878

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 857  SPPPPPKPXXXPPP 898
            SPPPPP P   PPP
Sbjct: 1310 SPPPPPPPPPPPPP 1323



 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +2

Query: 860  PPPPPKPXXXPPPXL 904
            PPPPP P   PPP L
Sbjct: 1312 PPPPPPPPPPPPPPL 1326


>SB_37809| Best HMM Match : NADH5_C (HMM E-Value=3)
          Length = 1165

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +1

Query: 181 TATNLLTTARTSLILPKTTTLMETA--TNLSTTVHITWTLPKADLTSSLPLSLVLAV 345
           T T  L    T L L   TTL+     T +   V IT TLP   +T++LPL ++  +
Sbjct: 541 TTTLPLVVITTILPLVTITTLLPLVVITTILPLVVITTTLPLVAITTTLPLVIITTI 597



 Score = 28.7 bits (61), Expect = 8.0
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +1

Query: 163 KTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVH---ITWTLPKADLTSSLPL 327
           +TL    +   +     +L L   TT++   T ++TT+H   IT TLP   +T+ LPL
Sbjct: 499 QTLLNHASKKAILAITNTLPLVVITTILHLVT-ITTTLHLVTITTTLPLVVITTILPL 555


>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 669

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +2

Query: 857 SPPPPPKPXXXPPPXLLXRGXXPXXSXXRXXXPXSPXT 970
           +PPPPP     PPP     G  P         P  P T
Sbjct: 364 TPPPPPPTNKPPPPPPPTNGPPPPPPPTNGPPPPPPPT 401



 Score = 29.1 bits (62), Expect = 6.0
 Identities = 13/37 (35%), Positives = 13/37 (35%)
 Frame = +2

Query: 860 PPPPPKPXXXPPPXLLXRGXXPXXSXXRXXXPXSPXT 970
           PPPPP     PPP     G  P         P  P T
Sbjct: 375 PPPPPPTNGPPPPPPPTNGPPPPPPPTNGPPPPPPPT 411


>SB_43520| Best HMM Match : RNase_PH (HMM E-Value=0.00011)
          Length = 972

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +1

Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADL 309
           T T  T     TTA T+     TTT   T T  +TT+ I W     D+
Sbjct: 526 TATATTTATATTTATTAATATTTTTTTTTNTTTNTTI-IIWIAAVTDV 572


>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 4072

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +1

Query: 145  TPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTT-VHITWTLPK---ADLT 312
            TPL       + T     T A  +  LPKTT   ET T   TT    T TLPK   A  T
Sbjct: 2968 TPLPKTTAAPETTPLPKTTAAPETTTLPKTTAAPETTTLPKTTAAPETTTLPKTTAAPET 3027

Query: 313  SSLP 324
            ++LP
Sbjct: 3028 TTLP 3031


>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
          Length = 867

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 860 PPPPPKPXXXPPP 898
           PPPPP+P   PPP
Sbjct: 205 PPPPPRPPPSPPP 217


>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1597

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 860 PPPPPKPXXXPPP 898
           PPPPP+P   PPP
Sbjct: 697 PPPPPQPSTPPPP 709


>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1438

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +1

Query: 130 WPTLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADL 309
           + T KT     KT T   A   +TT  T+     TTT   T T  +TT        K   
Sbjct: 21  YATTKTTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTIT 80

Query: 310 TSSLPLSLVLA 342
            +++ ++  +A
Sbjct: 81  ITTVTITTAVA 91


>SB_31773| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 874

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = -2

Query: 311 VRSALGRVHVICTVVDRFVAVSIRVVVFGRINDVRAVVNRFVAVS*VSV 165
           VR  + R      VV R    S+RVV+   +  VR V+ R+VA++ V V
Sbjct: 772 VRVVMRRYVTSVRVVMRRYVASVRVVMPRYVASVRVVMRRYVAIASVRV 820



 Score = 28.7 bits (61), Expect = 8.0
 Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = -2

Query: 311 VRSALGR-VHVICTVVDRFVAV-SIRVVVFGRINDVRAVVNRFVAVS*VSVFHYLNGV 144
           VR  + R V  +  V+ R+VA+ S+RVV+   +  VR V+ R+VA   V +  Y+  V
Sbjct: 794 VRVVMPRYVASVRVVMRRYVAIASVRVVMRRYVASVRVVMRRYVASVRVVMRRYVTSV 851


>SB_23120| Best HMM Match : Mucin (HMM E-Value=0.033)
          Length = 382

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +1

Query: 130 WPTLKTPLR*WKTLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADL 309
           + T KT     KT T   A   +TT  T+     TTT   T T  +TT        K   
Sbjct: 143 YATTKTTAATIKTKTTIIAITAITTTTTTTTTTTTTTTTTTTTTTTTTTTTATATTKTIT 202

Query: 310 TSSLPLSLVLA 342
            +++ ++  +A
Sbjct: 203 ITTVTITTAVA 213


>SB_18540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 286

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +1

Query: 184 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 315
           AT  +TT   ++  P  TT   TAT  +TT   T T P A  T+
Sbjct: 96  ATATITTYTATVTAPNATTTTPTATTTTTTT-TTTTTPYATTTT 138



 Score = 28.7 bits (61), Expect = 8.0
 Identities = 20/50 (40%), Positives = 23/50 (46%)
 Frame = +1

Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTS 315
           T T  TAT   TT  T+     TTT   T T   TT + T T P A  T+
Sbjct: 113 TTTTPTATTTTTTTTTTTTPYATTTTPNTTT---TTPNTTTTSPNATTTT 159


>SB_59006| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1211

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = +1

Query: 166 TLTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTLPKADLTSSLPLS 330
           ++ + TATN   TA     +PKTTT  ET     TTV    T    D   S+ +S
Sbjct: 352 SVPETTATN---TAPDKTAVPKTTTAPETTDASKTTVETQQTTYSRDPEISVTIS 403


>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 393

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +2

Query: 860 PPPPPKPXXXPPPXLL 907
           PPPPP P   PPP  L
Sbjct: 108 PPPPPPPPPPPPPITL 123


>SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027)
          Length = 253

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = -1

Query: 912 RXRRXGGGXXXGFGGGGG 859
           R RR GGG   G GGGGG
Sbjct: 159 RNRRRGGGGGGGGGGGGG 176


>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
          Length = 1410

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +2

Query: 800 PXTPRXRXXAXAXLLXXXXSPPPPPKPXXXPPP 898
           P TP+               PPPPP P   PPP
Sbjct: 340 PTTPQPPTPTTPKTHPQLGPPPPPPPPPPTPPP 372


>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2388

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = -2

Query: 386  HYFVINFXRYSLLPTASTRERGRLEVRSALGRVHVICT 273
            HY  + F R    PT S R R R E   A  RVHV C+
Sbjct: 973  HYLKVGFERLPSPPTNSRRRRLRSE---ADARVHVTCS 1007


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,017,821
Number of Sequences: 59808
Number of extensions: 384309
Number of successful extensions: 3316
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2844
length of database: 16,821,457
effective HSP length: 83
effective length of database: 11,857,393
effective search space used: 3047350001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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