Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_A03
(810 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48657| Best HMM Match : GST_C (HMM E-Value=5.8e-07) 138 4e-33
SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10) 38 0.010
SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14) 31 1.5
SB_13078| Best HMM Match : RVP (HMM E-Value=0.039) 31 1.5
SB_59190| Best HMM Match : rve (HMM E-Value=6e-18) 30 2.6
SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17) 30 2.6
SB_28788| Best HMM Match : RVP (HMM E-Value=0.028) 30 2.6
SB_23218| Best HMM Match : zf-CCHC (HMM E-Value=0.00066) 30 2.6
SB_12598| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_8572| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17) 30 2.6
SB_3903| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17) 30 2.6
SB_860| Best HMM Match : RVP (HMM E-Value=0.018) 30 2.6
SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22) 30 2.6
SB_46473| Best HMM Match : RVP (HMM E-Value=0.029) 30 2.6
SB_42289| Best HMM Match : RVT_1 (HMM E-Value=5.2e-17) 30 2.6
SB_29974| Best HMM Match : RVT_1 (HMM E-Value=3e-17) 30 2.6
SB_27267| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17) 30 2.6
SB_8937| Best HMM Match : RVP (HMM E-Value=0.029) 30 2.6
SB_4291| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_16159| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_25676| Best HMM Match : TSP_1 (HMM E-Value=0.0055) 29 4.5
SB_21904| Best HMM Match : Vinculin (HMM E-Value=0) 29 4.5
SB_51364| Best HMM Match : DUF1431 (HMM E-Value=5.9) 29 5.9
SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2) 29 5.9
SB_24984| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_48657| Best HMM Match : GST_C (HMM E-Value=5.8e-07)
Length = 203
Score = 138 bits (335), Expect = 4e-33
Identities = 77/162 (47%), Positives = 104/162 (64%)
Frame = +1
Query: 73 MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFES 252
MAAG LYTYP++FRA K LIAA+YSGT ++V P F FG+ N + +FLKKFP GKVPAFE+
Sbjct: 1 MAAGKLYTYPDSFRAQKILIAAEYSGTKIEV-PAFTFGKDNHTAEFLKKFPLGKVPAFET 59
Query: 253 ADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQ 432
AN R L T + +++D ELLPA+ WVFP G+MQ
Sbjct: 60 K---------------TANACTRAMPLLTT-----YVNFADQELLPAAATWVFPTYGMMQ 99
Query: 433 FNKQNVERAMSDLLAALKVLDGHLLTRTFLVTERITLADVIV 558
++KQ+ ++AM D+ + +L+ LL +TFLV ER+TLAD+ V
Sbjct: 100 YHKQSTDKAMEDVKKYMTMLNDVLLMKTFLVGERVTLADIAV 141
>SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10)
Length = 260
Score = 37.9 bits (84), Expect = 0.010
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Frame = +1
Query: 223 PAGKVPAFESADGKVLLTESNAIAYYVA--NESLRGGDLATQARVWQWASWSDSELLPAS 396
P +P E+ +G SN I Y+A ++ L G DL + +V QW + + A
Sbjct: 45 PFNTLPLLETKEGTFF--SSNTIIRYLAASSDKLYGSDLFQRGQVDQWLDITTCDFEAAV 102
Query: 397 CAWVFPYLGIMQFNKQNVERA--MSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSYT 570
A G ++VE A ++D+ L ++ HL R FLV + +T+AD V +
Sbjct: 103 AAVAIAKEG------RDVEGAKIVADINKFLGFVEKHLAGRKFLVGDSVTIADFSVATSI 156
Query: 571 AACFPARARPER 606
A + +R
Sbjct: 157 AVILTSLGDEDR 168
>SB_7437| Best HMM Match : PAS (HMM E-Value=7.2e-14)
Length = 505
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 106 NFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESN 285
N +K + Q + K+ P V GE N + +KK +P GK + + +
Sbjct: 105 NIGKFKMVWIDQIDESTKKLKPKMVAGEDNGFVNAIKKVSLEDIPEGNGPSGKAIREKRS 164
Query: 286 AIAYYVANESL 318
I + N+SL
Sbjct: 165 IIVNDIENDSL 175
>SB_13078| Best HMM Match : RVP (HMM E-Value=0.039)
Length = 251
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 434 STNRMLNVQCLTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
S ++ + LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 165 SREQIKSTTTLTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_59190| Best HMM Match : rve (HMM E-Value=6e-18)
Length = 660
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 175 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_51018| Best HMM Match : RVT_1 (HMM E-Value=5.8e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 123 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 161
>SB_28788| Best HMM Match : RVP (HMM E-Value=0.028)
Length = 278
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 175 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_23218| Best HMM Match : zf-CCHC (HMM E-Value=0.00066)
Length = 557
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 396 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 434
>SB_12598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 175 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_8572| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)
Length = 1432
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 291 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 329
>SB_3903| Best HMM Match : RVT_1 (HMM E-Value=4.5e-17)
Length = 609
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 313 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 351
>SB_860| Best HMM Match : RVP (HMM E-Value=0.018)
Length = 260
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 157 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 195
>SB_50204| Best HMM Match : rve (HMM E-Value=6.6e-22)
Length = 800
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 123 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 161
>SB_46473| Best HMM Match : RVP (HMM E-Value=0.029)
Length = 304
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 175 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_42289| Best HMM Match : RVT_1 (HMM E-Value=5.2e-17)
Length = 429
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 29 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 67
>SB_29974| Best HMM Match : RVT_1 (HMM E-Value=3e-17)
Length = 890
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 123 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 161
>SB_27267| Best HMM Match : RVT_1 (HMM E-Value=5.6e-17)
Length = 649
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 347 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 385
>SB_8937| Best HMM Match : RVP (HMM E-Value=0.029)
Length = 303
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 175 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 213
>SB_4291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 464 LTYWPP*KYWTDIFSHAPSLLPRESHLPMSLSSVTLLHA 580
LT P K + D FS+ P +LP + HL + + ++HA
Sbjct: 71 LTSDPVLKDYLDCFSNKPGMLPNKVHLEVDSAVTPVIHA 109
>SB_37850| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 597 SSTCWKACSSVTEDNDIGKCDSLGNKEGAC 508
SS CWK+CS D +C L KEG C
Sbjct: 463 SSQCWKSCSGCCVDKKPVQC-PLWAKEGEC 491
>SB_45212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 406 VFPYLGIMQFNKQNVERAMSDLLAALKVLDGHLLTRTFLVTERITLAD 549
++P + Q NV+R +DL + K+ L R F V E T AD
Sbjct: 73 IYPNIMDEQIRTANVQRGSADLQTSAKITLKKFLPRCFSVIESTTSAD 120
>SB_16159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 328 DLATQARVWQWASWSDSELLPASCA 402
DL T A+V+ WA W ++ SCA
Sbjct: 78 DLTTTAQVYSWAMWEPWQMRNLSCA 102
>SB_25676| Best HMM Match : TSP_1 (HMM E-Value=0.0055)
Length = 141
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 328 DLATQARVWQWASWSDSELLPASCA 402
DL T A+V+ WA W ++ SCA
Sbjct: 78 DLTTTAQVYSWAMWEPWQMRNLSCA 102
>SB_21904| Best HMM Match : Vinculin (HMM E-Value=0)
Length = 999
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +1
Query: 13 AKSSLANISSAPLLFPKTPTMAAGVLYTYPENFRAYKALIAAQYSGTDV 159
AKSSL N+ + + P A YT PEN + K + A+Y G V
Sbjct: 890 AKSSLYNLGAQGNVHPGFHASWAFAGYTGPENVKWAKTVTKARYEGPAV 938
>SB_51364| Best HMM Match : DUF1431 (HMM E-Value=5.9)
Length = 364
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 235 LFRQETSSRSLRTCWSRQIRNSVLLSHQSRNIVRRSTLYK 116
+FR + + + S ++ N V +SHQSR IV T+ K
Sbjct: 102 VFRSKQQAPNKAVGRSDEVTNEVAVSHQSRRIVESETVRK 141
>SB_39324| Best HMM Match : S-antigen (HMM E-Value=1.2)
Length = 252
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1
Query: 651 ATVRNQR*TFISDERTLGSSTCWKACSSVTEDNDIGKCDS 532
AT ++R +S E T SST + SS ++ND+ + D+
Sbjct: 14 ATTEDERLNEVSQEETTKSSTKLNSDSSAKDENDVNEGDT 53
>SB_24984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 12 GKILPRQYFLGPPSLSENSNHG 77
GK PR YFLG ++ N+ HG
Sbjct: 22 GKYYPRVYFLGKATVHGNNGHG 43
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,806,006
Number of Sequences: 59808
Number of extensions: 614095
Number of successful extensions: 1723
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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