Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_A21
(867 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 57 2e-08
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 55 7e-08
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 54 2e-07
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-07
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 47 2e-05
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 3e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 43 4e-04
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 42 7e-04
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 9e-04
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 42 9e-04
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 41 0.002
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 40 0.003
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 40 0.003
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 40 0.003
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.006
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.006
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 38 0.008
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 38 0.008
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.019
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 35 0.075
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 33 0.30
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.6
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 30 2.1
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.1
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 3.7
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 3.7
SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 29 3.7
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 29 3.7
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 4.9
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 29 6.5
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24) 29 6.5
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 29 6.5
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 57.2 bits (132), Expect = 2e-08
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 305
++ LL Y +D+ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 306 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKR 464
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 465 LDISTPISMQLDNWPNDMQTC 527
I + + + +P D+Q+C
Sbjct: 155 AIIKSECKIDVRFFPFDVQSC 175
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 305
+++ L Y +D+ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 55.2 bits (127), Expect = 7e-08
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Frame = +3
Query: 207 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 383
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 384 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQVRF 545
N+A + +R +++ G V W+ L + T M + ++P D Q C ++RF
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQAC--ELRF 134
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 54.0 bits (124), Expect = 2e-07
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Frame = +3
Query: 240 ESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD-- 410
E +++ ++ W + LSWNA E+G S + ++LW+PD+ L N A ++A
Sbjct: 104 EKYELLKLSLYVRQIWKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSL 163
Query: 411 YALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
Y +A+ VS+ G W+ ++T + + +P D Q+CT +
Sbjct: 164 YGFKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLK 207
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Frame = +3
Query: 252 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 422
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 423 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
V +NG V W+ + + + M + ++P D Q C
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYC 129
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 51.6 bits (118), Expect = 8e-07
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 5/109 (4%)
Frame = +3
Query: 225 HANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 398
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 399 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
++G+ + + + ++G+V W+ + + + + + N+P D Q C +
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLE 307
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 7/92 (7%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 431
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 432 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
S++GS +W+ I T + + +P D+Q C
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYC 117
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = +3
Query: 216 HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL-NA 389
HLR + V + ++ W + L+WN ++ G + ++ ++W PD++L NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 390 AATTAG---DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
T AG Y S++G+ W ++ ++ + +P D Q C+ +
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLK 217
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +3
Query: 153 LLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 317
L TY++D P D + V L L L ++ + T+ + ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 318 EW-GCSTWLVSSERLWRPDVVLLNAA 392
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 446
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 447 VSWIKRLDISTPISMQLDNWPNDMQTCT 530
V WI + ++ ++++ WP D Q CT
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCT 491
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Frame = +3
Query: 234 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----T 398
+ E L+M W D L WN ++G T + + + +W P V++ N A +
Sbjct: 534 VEEKNMVFTTNVRLRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGES 593
Query: 399 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
R V ++G+V W+ I + + + +P D Q C
Sbjct: 594 ITSSNTPRPVVRSDGTVLWMVPTVIKSSCVIDVKYFPFDQQLC 636
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 279 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 392
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 42.7 bits (96), Expect = 4e-04
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD----------Y 413
+ + W + LSWNA E+ G S VS +R W PD++L N+ +A + Y
Sbjct: 21 IAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGGGTEKY 80
Query: 414 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
+ + +NG SW+ + + +P D Q CT +
Sbjct: 81 KTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLE 121
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 42.7 bits (96), Expect = 4e-04
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 437
+ + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
NG W +I + ++ + +P D Q C
Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFC 153
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 41.9 bits (94), Expect = 7e-04
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 449
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 450 SWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
W+ + S+ ++++ +P D Q C+ +
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLK 128
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 41.5 bits (93), Expect = 9e-04
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 13/132 (9%)
Frame = +3
Query: 171 RDSPPDS---KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTW 338
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 339 LVSS----ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISM 491
+ +++W+PD L N AG D +L RV NG+V++ R+ + M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 492 QLDNWPNDMQTC 527
+ N+P D Q+C
Sbjct: 187 EFRNFPMDRQSC 198
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 41.5 bits (93), Expect = 9e-04
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YALRARVSN 437
+ + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y +S
Sbjct: 45 VNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISK 104
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+GS +W + + + +P D QTC
Sbjct: 105 DGSSAWFSPASFRSTCKIDVTYFPFDEQTC 134
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 252 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 386
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 5/90 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 437
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+G+ +W+ +T + + +P D Q C
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQEC 133
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Frame = +3
Query: 276 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 440
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 441 GSVSWIKRLDISTPISMQLDNWPNDMQTC 527
G + W + T + + +P D QTC
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTC 176
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Frame = +3
Query: 276 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 434
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 435 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQ 536
N G W + + SM L WP D QTC +
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMK 216
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +3
Query: 255 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYAL 419
V + + + W + L+W+ +G T + V R+WRPD++L NA T G +
Sbjct: 69 VSLHQIIDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYT 128
Query: 420 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+ ++ +GS W+ + + + +P D Q+C
Sbjct: 129 KVQLKFDGSSLWLAPIIFKSTCKFDVAYFPFDEQSC 164
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 38.7 bits (86), Expect = 0.006
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 440
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 441 GSVSWIKRLDISTPISMQLDNWPNDMQ 521
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Frame = +3
Query: 285 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 443
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 444 SVSWIKRLDISTPISMQLDNWPNDMQTCT 530
V W+ ++ +++ WP D Q CT
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCT 90
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/60 (25%), Positives = 31/60 (51%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 530
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.1 bits (82), Expect = 0.019
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 117 ENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIR---ESESTVRIQADLQM 281
++ L L+ D Y+++ P D + V + + + + E + + ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 282 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 35.1 bits (77), Expect = 0.075
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP---DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSW 308
++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 309 NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPIS 488
S +W PD NA + + NG + + R +
Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194
Query: 489 MQLDNWPNDMQTCT 530
M L N+P D+Q C+
Sbjct: 195 MDLFNFPLDVQRCS 208
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 34.3 bits (75), Expect = 0.13
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 446
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 447 VSWIKRLDISTPISMQLDNWPNDMQTC 527
V + + I+ M+L ++P D Q C
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQC 95
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 33.1 bits (72), Expect = 0.30
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 192 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 368
K +V LH + A + S S VR+ +++ W + L WN ++ G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 369 DVVLLN 386
D+VL N
Sbjct: 127 DIVLYN 132
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -1
Query: 468 PSALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCR 289
P + R +SR H R + R+ L+ + PR S+ T K SP+ R S R
Sbjct: 275 PPSEERPKSRLYRHSRSKSKERKTLKSPIRSPRGQSSRERNTKRKSKSPSLERRRSRARR 334
Query: 288 SNSFE 274
S S E
Sbjct: 335 SRSIE 339
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 285 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 380
W + L+WN E+G T VS +W PD+VL
Sbjct: 53 WYNPLLTWNVTEYGGLKTINVSPTIIWLPDIVL 85
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 30.3 bits (65), Expect = 2.1
Identities = 31/150 (20%), Positives = 63/150 (42%), Gaps = 9/150 (6%)
Frame = +3
Query: 117 ENATSLSLMIDSLLATYDRDSPP---DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMN 284
E A + + +D L ++ D+ P +VV + +++ + I + ++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 285 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 449
W D RL+++ E + +W PD + N ++T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 450 SWIKRLDISTPISMQLDNWPNDMQTCTFQV 539
R+ ++ M L +P D QTC +
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNI 188
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +3
Query: 357 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
Query: 528 TFQV 539
+
Sbjct: 98 NLSI 101
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 285 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 386
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 521
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 522 TC 527
C
Sbjct: 92 VC 93
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 222 RHANIRESEST-VRIQADLQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 386
R+++ ++S++ + + W D L WN G V +W PD+ L+N
Sbjct: 10 RYSSCQDSKAQELTTNLRIYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 257 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 174
HG LG S+S + G+++ D+GVGGGV
Sbjct: 91 HGHLG----SVSMIMGKMNNDYGVGGGV 114
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -2
Query: 257 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 174
HG LG S+S + G+++ D+GVGGGV
Sbjct: 358 HGHLG----SVSMIMGKMNNDYGVGGGV 381
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 426 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFQV 539
R+ NG++ + RL +++ M L N+P D Q C ++
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLKM 101
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 333 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 443
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 429 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 530
V+N G V W + S+++ WP D+Q C+
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 54
>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
Length = 540
Score = 28.7 bits (61), Expect = 6.5
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +2
Query: 116 RKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQ 295
R+ N H R A + SG P R SQ T HS VR R N G S+ DR+
Sbjct: 425 RQTNPARNHHRSASVSNMSGPPRRGTGASQVGRP-RTSTHSDVRESRDNPGMKSDSRDRE 483
Query: 296 TTELE 310
+ + E
Sbjct: 484 SRDSE 488
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 28.7 bits (61), Expect = 6.5
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -2
Query: 470 VQALYPGDGAVIRYTGAESVVPGGGCSRV*QYHVRP-PQAFRGHQPSAAAP-LPCVPTQS 297
VQ + DG + Y S VP G S + V+P QA G +P A P +P T +
Sbjct: 1172 VQQVSASDGLCVTYAVGPSAVPAGIPSTLLLTGVKPVQQASSGVRPVAVTPRIPVTLTPN 1231
Query: 296 FVDP 285
+ P
Sbjct: 1232 AIRP 1235
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 429 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 530
V+N G V W + S+++ WP D+Q C+
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCS 135
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 258 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
+++ + + W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1463 KLKQIVDLQWENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 242 LTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVDHE 138
L+++S +G VD FGV +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,124,282
Number of Sequences: 59808
Number of extensions: 502299
Number of successful extensions: 1447
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2479240863
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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