Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40017
(868 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 31 0.045
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 30 0.10
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 28 0.32
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 28 0.42
AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450 pr... 26 1.3
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 25 3.0
AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 25 3.9
AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 25 3.9
AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 25 3.9
AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 25 3.9
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 24 5.2
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 24 5.2
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 24 5.2
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 24 5.2
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 24 5.2
AJ439353-12|CAD27934.1| 160|Anopheles gambiae putative MLC1 pro... 24 6.9
AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450 CY... 23 9.1
AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450 pr... 23 9.1
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 23 9.1
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 31.1 bits (67), Expect = 0.045
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Frame = +2
Query: 260 QLQKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAINVAEKNNAEIEKIKA 439
+LQ+ E + E + S + N LE ++QE A + K ++ +
Sbjct: 349 ELQEVEVKRAAFENEVAGESKKRGSNVHLERDLVQEYDRLKQKADATSSKYLIHLDSVNR 408
Query: 440 ELHAISQQLASEIEAHKVTKENLKRL----NEMLRRKMS*VLKWETTKGPLKE 586
E + +L SEI +EN K++ NE L+R+ + +T++ L+E
Sbjct: 409 EQKSDQDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEE 461
Score = 27.5 bits (58), Expect = 0.56
Identities = 21/87 (24%), Positives = 43/87 (49%)
Frame = +2
Query: 362 QEKVESLTSAINVAEKNNAEIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEMLRRKM 541
Q++++S + E+N +IE K E ++L I+ ++ E KR+ L + +
Sbjct: 414 QDRLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDV 473
Query: 542 S*VLKWETTKGPLKELTSKMEGNREKV 622
T+K + EL S+++ RE++
Sbjct: 474 G------TSKERIHELQSELDNVREQL 494
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 29.9 bits (64), Expect = 0.10
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +2
Query: 431 IKAELHAISQQLASEIEAHKVTKEN---LKRLNEMLRRKMS*VLKWETTKGPLKELTSKM 601
+ A+L I QL + +E ++ +E L+R NE+L VL+ +T + +S
Sbjct: 106 LMAQLQNIGAQLTTALEELRLCREENAALRRENELLLTGTRSVLELQTAANATLQQSSGQ 165
Query: 602 EGNRE 616
GNRE
Sbjct: 166 GGNRE 170
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 28.3 bits (60), Expect = 0.32
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 QLQKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAINVAEKNNAEIEKIKA 439
+L+ + +L+K I E A++ + + V ++ ++ A+ E AEI +I+A
Sbjct: 787 ELEHSRTILAKLQKGIEEEQAKLDQVRRT-VQQEEQTAQAKKDAMGAVE---AEIARIQA 842
Query: 440 ELHAISQQLASEIEA-HKVTKENLKRLNEMLRRK 538
+ QQ +++ HKV ++ LKR E + +
Sbjct: 843 SIDK-EQQARHDLQTNHKVKQQALKRSTESMEER 875
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 27.9 bits (59), Expect = 0.42
Identities = 19/73 (26%), Positives = 40/73 (54%)
Frame = +2
Query: 305 INENSAEVHKNGKLEVPMLQEKVESLTSAINVAEKNNAEIEKIKAELHAISQQLASEIEA 484
+ N ++ K + + + + L +V +KN EIE+ +A++ ++++Q +E+EA
Sbjct: 388 VQANMRATNERRKKTLEQIAAEEKRLLELQDVPKKNKKEIEESEAKIESLTRQ-KTEVEA 446
Query: 485 HKVTKENLKRLNE 523
K+T NL L +
Sbjct: 447 -KLT-ANLATLKD 457
>AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 26.2 bits (55), Expect = 1.3
Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -1
Query: 646 YLLSIHLNHLFPIS-LHLRRKFFQWTFRSLPF 554
+LLS L+ F + +H+R+K+ W+ R +PF
Sbjct: 6 WLLSAVLSLCFVLCVIHIRKKYSFWSERGVPF 37
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 25.0 bits (52), Expect = 3.0
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 356 MLQEKVESLTSAINVAEKNNAEIEKIKAELHAISQ 460
M+Q K + + + + +N + EKI + +HA+ Q
Sbjct: 637 MIQPKQQQHGTGLPLRTQNKTDAEKILSHVHALKQ 671
>AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.6 bits (51), Expect = 3.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 654 GDYYRDENPNPTTRGFNNSGGNPKTGS 734
GD + +P RGF+ SGG GS
Sbjct: 203 GDEQQSHAVSPNQRGFSASGGGGSGGS 229
>AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.6 bits (51), Expect = 3.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 654 GDYYRDENPNPTTRGFNNSGGNPKTGS 734
GD + +P RGF+ SGG GS
Sbjct: 203 GDEQQSHAVSPNQRGFSASGGGGSGGS 229
>AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.6 bits (51), Expect = 3.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 654 GDYYRDENPNPTTRGFNNSGGNPKTGS 734
GD + +P RGF+ SGG GS
Sbjct: 203 GDEQQSHAVSPNQRGFSASGGGGSGGS 229
>AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 24.6 bits (51), Expect = 3.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 654 GDYYRDENPNPTTRGFNNSGGNPKTGS 734
GD + +P RGF+ SGG GS
Sbjct: 203 GDEQQSHAVSPNQRGFSASGGGGSGGS 229
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.2 bits (50), Expect = 5.2
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = +2
Query: 359 LQEKVESLTSAINVAEKNNAEIEKIKAELH-------AISQQLASEIEAHKVTKENLK-- 511
+ ++ +L +A+N N +I+KIK E + I++ LA+++ H EN+
Sbjct: 133 VNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLATKMRDHAQLLENVGTN 192
Query: 512 -RLNEMLRRKMS*VLKWETTKGPLKELTSKMEGNREKVIQMD 634
L E L + S L+ E LK+L E + V + D
Sbjct: 193 IELAETLLDRAS--LQKEDAVDALKQLKYAKEQAEKAVAEGD 232
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.2 bits (50), Expect = 5.2
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = +2
Query: 359 LQEKVESLTSAINVAEKNNAEIEKIKAELH-------AISQQLASEIEAHKVTKENLK-- 511
+ ++ +L +A+N N +I+KIK E + I++ LA+++ H EN+
Sbjct: 133 VNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTN 192
Query: 512 -RLNEMLRRKMS*VLKWETTKGPLKELTSKMEGNREKVIQMD 634
L E L + S L+ E LK+L E + V + D
Sbjct: 193 IELAETLLDRAS--LQKEDAVDALKQLKYAKEQAEKAVAEGD 232
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.2 bits (50), Expect = 5.2
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = +2
Query: 359 LQEKVESLTSAINVAEKNNAEIEKIKAELH-------AISQQLASEIEAHKVTKENLK-- 511
+ ++ +L +A+N N +I+KIK E + I++ LA+++ H EN+
Sbjct: 133 VNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTN 192
Query: 512 -RLNEMLRRKMS*VLKWETTKGPLKELTSKMEGNREKVIQMD 634
L E L + S L+ E LK+L E + V + D
Sbjct: 193 IELAETLLDRAS--LQKEDAVDALKQLKYAKEQAEKAVAEGD 232
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.2 bits (50), Expect = 5.2
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = +2
Query: 359 LQEKVESLTSAINVAEKNNAEIEKIKAELH-------AISQQLASEIEAHKVTKENLK-- 511
+ ++ +L +A+N N +I+KIK E + I++ LA+++ H EN+
Sbjct: 133 VNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTN 192
Query: 512 -RLNEMLRRKMS*VLKWETTKGPLKELTSKMEGNREKVIQMD 634
L E L + S L+ E LK+L E + V + D
Sbjct: 193 IELAETLLDRAS--LQKEDAVDALKQLKYAKEQAEKAVAEGD 232
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 24.2 bits (50), Expect = 5.2
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = +2
Query: 359 LQEKVESLTSAINVAEKNNAEIEKIKAELH-------AISQQLASEIEAHKVTKENLK-- 511
+ ++ +L +A+N N +I+KIK E + I++ LA+++ H EN+
Sbjct: 1272 VNDEALTLFAAVNRTAPPNIDIDKIKKEANQYNREADRIAEDLANKMRDHAQLLENVGTN 1331
Query: 512 -RLNEMLRRKMS*VLKWETTKGPLKELTSKMEGNREKVIQMD 634
L E L + S L+ E LK+L E + V + D
Sbjct: 1332 IELAETLLDRAS--LQKEDAVDALKQLKYAKEQAEKAVAEGD 1371
>AJ439353-12|CAD27934.1| 160|Anopheles gambiae putative MLC1
protein protein.
Length = 160
Score = 23.8 bits (49), Expect = 6.9
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 654 GDYYRDENPNPTTRGFNNSGGNPKTGS*KRDFQQAL 761
G+ R N NPT GG K G K F++ L
Sbjct: 34 GNALRALNLNPTIELIGKMGGTQKRGEKKIKFEEFL 69
>AY062207-1|AAL58568.1| 504|Anopheles gambiae cytochrome P450
CYP6S2 protein.
Length = 504
Score = 23.4 bits (48), Expect = 9.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 619 LFPISLHLRRKFFQWTFRSLPF 554
+F I H R+++ W R +PF
Sbjct: 13 IFWIYFHFRQRYLFWLNRDVPF 34
>AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.4 bits (48), Expect = 9.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -1
Query: 646 YLLSIHLNHLFPISLHLRRKFFQWTFRSLPF 554
+LL + L L+ I LH +++ W R +PF
Sbjct: 5 FLLVVSLGWLW-IYLHFNQRYRFWVERQVPF 34
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 23.4 bits (48), Expect = 9.1
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = +3
Query: 3 ERDSAIKMLEEKD 41
+RDSA+K++E+KD
Sbjct: 177 KRDSALKLIEKKD 189
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,994
Number of Sequences: 2352
Number of extensions: 11835
Number of successful extensions: 37
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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