Silkworm BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40015
         (826 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles ...    71   4e-14
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   4.9  
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            24   6.5  
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            24   6.5  
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            24   6.5  
AY146725-1|AAO12085.1|  155|Anopheles gambiae odorant-binding pr...    24   6.5  
AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding pr...    24   6.5  

>U50472-1|AAA93475.1|  141|Anopheles gambiae protein ( Anopheles
           gambiae putativefatty acid binding protein mRNA, partial
           cds. ).
          Length = 141

 Score = 70.9 bits (166), Expect = 4e-14
 Identities = 32/67 (47%), Positives = 43/67 (64%)
 Frame = +1

Query: 55  GKKYKMTSSENFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF 234
           GKKYKM  SE FD++M  +GVG++ RK  N+++PTVEL K+GDEY   T S  +T     
Sbjct: 35  GKKYKMEKSEGFDDYMLALGVGMVLRKLGNSISPTVELVKNGDEYTFNTLSPSRTRRSSS 94

Query: 235 KPGEEFE 255
               EF+
Sbjct: 95  SWAMEFD 101



 Score = 34.3 bits (75), Expect = 0.005
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = +3

Query: 255 EDRADGAKVKSVCTFEGNTLKQVQK 329
           E+  DG  VKSVCTF+GN L   QK
Sbjct: 102 EETVDGRMVKSVCTFDGNKLIHEQK 126


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -3

Query: 710 MKRIF*ITNXNFAHKRPTRCYRGR*TYFSFVTATRFCNSN 591
           +KR+  +    + H +  RC R R  YF   T + +C+ N
Sbjct: 411 LKRLKRVKRAAYRHYQTRRCQRSRSIYFD--THSLYCSYN 448


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 133 KAANAVTPTVELRKDGDEYNLVTSST 210
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 133 KAANAVTPTVELRKDGDEYNLVTSST 210
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 133 KAANAVTPTVELRKDGDEYNLVTSST 210
           K    VTPT  +   GD+ N   +ST
Sbjct: 89  KTGTGVTPTSSIASSGDDTNSSNNST 114


>AY146725-1|AAO12085.1|  155|Anopheles gambiae odorant-binding
           protein AgamOBP6 protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = -3

Query: 254 SNSSPGLNFISVVLKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSSKFSEE 75
           SN+    N ++ V+ V  V  L   P+L  +   +T      + +    V M+  K SEE
Sbjct: 3   SNAFYSSNTVTWVVAVIGVYCLVFRPALVHAQQSLTQADMDEIAKGMRKVCMSRHKISEE 62

Query: 74  VILYFLPTNSIFID 33
           +  Y  P+  IF D
Sbjct: 63  MANY--PSQGIFPD 74


>AF437889-1|AAL84184.1|  155|Anopheles gambiae odorant binding
           protein protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = -3

Query: 254 SNSSPGLNFISVVLKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSSKFSEE 75
           SN+    N ++ V+ V  V  L   P+L  +   +T      + +    V M+  K SEE
Sbjct: 3   SNAFYSSNTVTWVVAVIGVYCLVFRPALVHAQQSLTQADMDEIAKGMRKVCMSRPKISEE 62

Query: 74  VILYFLPTNSIFID 33
           +  Y  P+  IF D
Sbjct: 63  MANY--PSQGIFPD 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,070
Number of Sequences: 2352
Number of extensions: 14289
Number of successful extensions: 34
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)