Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30008X
(594 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 29 0.15
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 29 0.15
AF043443-1|AAC05668.1| 232|Anopheles gambiae putative pupal-spe... 25 2.4
AF043439-1|AAC05664.1| 239|Anopheles gambiae putative pupal-spe... 25 2.4
AF043437-1|AAC05662.1| 239|Anopheles gambiae putative pupal-spe... 25 2.4
AF043434-1|AAC05659.1| 232|Anopheles gambiae putative pupal-spe... 25 2.4
AF043433-2|AAC05657.1| 239|Anopheles gambiae putative pupal-spe... 25 2.4
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 24 3.2
AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein p... 24 3.2
AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding pr... 24 4.3
AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding pr... 24 4.3
AF043436-1|AAC05661.1| 263|Anopheles gambiae putative pupal-spe... 23 5.6
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 9.8
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 28.7 bits (61), Expect = 0.15
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 516 IAIPCNTKSSH-SIGFDVGGCWHVEVL 593
+++ CN K H S+GF +GG +VEV+
Sbjct: 1404 LSVNCNGKVVHGSVGFSIGGWSYVEVM 1430
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 28.7 bits (61), Expect = 0.15
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +3
Query: 516 IAIPCNTKSSH-SIGFDVGGCWHVEVL 593
+++ CN K H S+GF +GG +VEV+
Sbjct: 1405 LSVNCNGKVVHGSVGFSIGGWSYVEVM 1431
>AF043443-1|AAC05668.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 24.6 bits (51), Expect = 2.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 435 STHY*SFICQHSCDCFVQHRLPTKIVDIAIPCNTKS 542
S H I QHS QH P + IA P KS
Sbjct: 48 SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83
>AF043439-1|AAC05664.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 24.6 bits (51), Expect = 2.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 435 STHY*SFICQHSCDCFVQHRLPTKIVDIAIPCNTKS 542
S H I QHS QH P + IA P KS
Sbjct: 48 SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83
>AF043437-1|AAC05662.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinCP2b protein.
Length = 239
Score = 24.6 bits (51), Expect = 2.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 435 STHY*SFICQHSCDCFVQHRLPTKIVDIAIPCNTKS 542
S H I QHS QH P + IA P KS
Sbjct: 48 SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83
>AF043434-1|AAC05659.1| 232|Anopheles gambiae putative
pupal-specific cuticular proteinCP2d protein.
Length = 232
Score = 24.6 bits (51), Expect = 2.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 435 STHY*SFICQHSCDCFVQHRLPTKIVDIAIPCNTKS 542
S H I QHS QH P + IA P KS
Sbjct: 48 SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83
>AF043433-2|AAC05657.1| 239|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 239
Score = 24.6 bits (51), Expect = 2.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +3
Query: 435 STHY*SFICQHSCDCFVQHRLPTKIVDIAIPCNTKS 542
S H I QHS QH P + IA P KS
Sbjct: 48 SVHAAPAIYQHSAPAIYQHSAPAIVKTIAQPTIIKS 83
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 24.2 bits (50), Expect = 3.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 531 NTKSSHSIGFDVGGCWHV 584
NT + +++G CWHV
Sbjct: 1668 NTFDGKTYDYELGNCWHV 1685
>AB090821-1|BAC57917.1| 353|Anopheles gambiae gag-like protein
protein.
Length = 353
Score = 24.2 bits (50), Expect = 3.2
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 20 VVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTH--VIN 193
+VT+++ + G+D+LA +EDV + L E T +++RR DGT +
Sbjct: 202 IVTEMAEVLITGIDMLA-KKEDVERGL----QRALERTAVAATTSLWERR-DGTQRARVR 255
Query: 194 LRRTWEKLVLAARAVV 241
L R L+L R VV
Sbjct: 256 LPRRDTDLLLDKRIVV 271
>AY146753-1|AAO12068.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP34 protein.
Length = 311
Score = 23.8 bits (49), Expect = 4.3
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 249 RTR*CVRHLITALRSACCTEVCRAHRC-YAYCGA 347
RT C+ + CT+V +A +C Y Y GA
Sbjct: 119 RTEACLAENLYTCDDDLCTQVYKAFQCYYQYYGA 152
>AY146750-1|AAO12065.1| 311|Anopheles gambiae odorant-binding
protein AgamOBP37 protein.
Length = 311
Score = 23.8 bits (49), Expect = 4.3
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 249 RTR*CVRHLITALRSACCTEVCRAHRC-YAYCGA 347
RT C+ + CT+V +A +C Y Y GA
Sbjct: 119 RTEACLAENLYTCDDDLCTQVYKAFQCYYQYYGA 152
>AF043436-1|AAC05661.1| 263|Anopheles gambiae putative
pupal-specific cuticular proteinCP2c protein.
Length = 263
Score = 23.4 bits (48), Expect = 5.6
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 456 ICQHSCDCFVQHRLPTKIVDIAIPCNTKS 542
I QHS QH P + IA P KS
Sbjct: 79 IYQHSAPAIYQHSAPAIVKTIAQPTIIKS 107
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 22.6 bits (46), Expect = 9.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 260 MCSSSHHGPSVSVLY*SLPRTPVL-RLLRGVSHQ 358
M +SHH + LY SLP P L +L G+ Q
Sbjct: 402 MLRASHHSAAGHPLYPSLPYPPNLYGMLPGMGMQ 435
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,077
Number of Sequences: 2352
Number of extensions: 16606
Number of successful extensions: 25
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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