Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30082
(859 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 27 0.55
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 26 1.3
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 26 1.7
AY330182-1|AAQ16288.1| 181|Anopheles gambiae odorant-binding pr... 24 5.1
AJ618927-1|CAF02006.1| 235|Anopheles gambiae odorant-binding pr... 24 5.1
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 24 6.8
AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin bi... 24 6.8
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 24 6.8
AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse t... 23 9.0
AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse t... 23 9.0
AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse t... 23 9.0
>M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 442
Score = 27.5 bits (58), Expect = 0.55
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -1
Query: 400 RIVSWLVACDFNTYLCMSRFSQQINVSTDPSSRARSVS 287
R + WL +C ++ +C F Q + P+ A SVS
Sbjct: 14 RDIVWLRSCSCHSSVCAVSFVMQCSTCNAPTDSANSVS 51
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 26.2 bits (55), Expect = 1.3
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 745 AFLKKGGSHFACTRGLPFWA*NLTVGPNRKNCLLFPK 855
AFL K SH + GL N T+ +N L PK
Sbjct: 91 AFLLKNSSHSGASSGLNTTQVNTTISAGTQNHLRLPK 127
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 25.8 bits (54), Expect = 1.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 594 SFRKPRTNWLPSWLLSVMI 538
+FR PRT+ +P W+ SV +
Sbjct: 320 NFRGPRTHRMPMWIRSVFL 338
>AY330182-1|AAQ16288.1| 181|Anopheles gambiae odorant-binding
protein AgamOBP56 protein.
Length = 181
Score = 24.2 bits (50), Expect = 5.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -1
Query: 703 LNKSVELSVIRLVEFPRSVEAASDWKVQLCNGGDRRILPKAANELASL 560
+N+ L +L+EF +S AA DW+ L G + +A + A +
Sbjct: 74 VNEDGTLIEPKLMEFVKSNFAADDWQQPLLAGHIETCVKEAKEKAAKM 121
>AJ618927-1|CAF02006.1| 235|Anopheles gambiae odorant-binding
protein OBPjj7a protein.
Length = 235
Score = 24.2 bits (50), Expect = 5.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -1
Query: 703 LNKSVELSVIRLVEFPRSVEAASDWKVQLCNGGDRRILPKAANELASL 560
+N+ L +L+EF +S AA DW+ L G + +A + A +
Sbjct: 128 VNEDGTLIEPKLMEFVKSNFAADDWQQPLLAGHIETCVKEAKEKAAKM 175
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 23.8 bits (49), Expect = 6.8
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -2
Query: 456 RSLCR*NVICPSLVQASGGELFPGWWHATSIRI 358
R+L + +C + + GE++ G WH S+ +
Sbjct: 145 RTLAKQVSLCECIGRGRYGEVWRGIWHGESVAV 177
>AJ441131-1|CAD29630.1| 567|Anopheles gambiae putative chitin
binding protein protein.
Length = 567
Score = 23.8 bits (49), Expect = 6.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 313 PSSRARSVSSTPKQYFPVSW 254
P++ V + PK+Y+PV +
Sbjct: 342 PTNAGHKVMNAPKEYYPVGY 361
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 23.8 bits (49), Expect = 6.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 313 PSSRARSVSSTPKQYFPVSW 254
P++ V + PK+Y+PV +
Sbjct: 350 PTNAGHKVMNAPKEYYPVGY 369
>AJ970248-1|CAI96720.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 23.4 bits (48), Expect = 9.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 775 QNGNRPFLKTRGNLAPFPSKCLPSLNKSVELSVI 674
Q+G P T NL F S C S++ +++ VI
Sbjct: 35 QHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVI 68
>AJ970247-1|CAI96719.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 23.4 bits (48), Expect = 9.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 775 QNGNRPFLKTRGNLAPFPSKCLPSLNKSVELSVI 674
Q+G P T NL F S C S++ +++ VI
Sbjct: 35 QHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVI 68
>AJ970246-1|CAI96718.1| 132|Anopheles gambiae putative reverse
transcriptase protein.
Length = 132
Score = 23.4 bits (48), Expect = 9.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -1
Query: 775 QNGNRPFLKTRGNLAPFPSKCLPSLNKSVELSVI 674
Q+G P T NL F S C S++ +++ VI
Sbjct: 35 QHGFVPNRSTTTNLMQFVSSCHKSIDARLQVDVI 68
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 979,826
Number of Sequences: 2352
Number of extensions: 20969
Number of successful extensions: 33
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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