Silkworm BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20041
         (743 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    34   0.005
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   1.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   2.5  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   7.5  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 33.9 bits (74), Expect = 0.005
 Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 4/96 (4%)
 Frame = -2

Query: 484  PYNFSLRSTSSKGSVSHPSDFNAGCTS-K*P*IQTVFFFGSLPNTPTKTGGS---*TSLP 317
            P+   L  TSSK + +HPS   A   S   P + T    G   NTP          T+  
Sbjct: 726  PHGAPLALTSSKSASTHPSPHPATRASPSSPIVATSSSGGGGSNTPNSAAAPHPYYTAAA 785

Query: 316  SIV*KPTSLNSVVAPTSFNLSASSEPYGCNPHDISH 209
                 P SL+S   P   +  +S  P G   H + H
Sbjct: 786  MAAASPLSLSSKAPPHPHSALSSHSPVGAGSHHLHH 821


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 55   YHQHYSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQL 171
            YHQ   +  +    K+  +K   EI K  ++NKD Y ++
Sbjct: 891  YHQRDKLLKQNDELKLEIKKKENEITKVRNENKDGYDRI 929


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 253 ASSEPYGCNPHDISHH 206
           AS  PYG   H +SHH
Sbjct: 697 ASGSPYGGGGHHLSHH 712


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +1

Query: 19  PATKQLVPFFPAYHQHYSVSSKQVSAKMATEKTLPEIFKYVDQNKD 156
           P++ Q     P   Q  S SSK   +       L EI+K+  +N D
Sbjct: 666 PSSNQSSSSTPNAEQSPSASSKDTFSNEYVLTNLDEIYKFEIENDD 711


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,023
Number of Sequences: 2352
Number of extensions: 17716
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)