Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_F_A14
(710 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 35 0.002
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 33 0.012
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 30 0.062
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 30 0.082
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 27 0.77
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 26 1.3
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 25 3.1
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 24 4.1
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 24 4.1
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 35.1 bits (77), Expect = 0.002
Identities = 27/148 (18%), Positives = 65/148 (43%)
Frame = +1
Query: 160 AKXANLRAEXAEXXARQLQKXXQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAAL 339
AK +L+A+ A+ + ++ ++ E +L ++++ + ++ E+ + + E+ L
Sbjct: 769 AKVKDLQAKIADGKGHR-ERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLEIEEL 827
Query: 340 NRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALENQL 519
+ I A +L E S DE A L+ + +E+M++ +L
Sbjct: 828 QKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQSKEL 887
Query: 520 KEARFLAEEADKKYDEVARKLAMVEADL 603
K ++ K+ DE+ ++ E ++
Sbjct: 888 KAKYHQRDKLLKQNDELKLEIKKKENEI 915
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 32.7 bits (71), Expect = 0.012
Identities = 22/109 (20%), Positives = 46/109 (42%)
Frame = +1
Query: 184 EXAEXXARQLQKXXQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXX 363
E + +LQK + + +LDQ + ++ Q + K+ A+ E+E+A + I
Sbjct: 789 EHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVEAEIARIQASIDKEQ 848
Query: 364 XXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDALE 510
L ++++ +E +R R L + ++ R +A E
Sbjct: 849 QARHDLQTNHKVKQQALKRSTESMEERKRTRVALS--AALEQARQEASE 895
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 30.3 bits (65), Expect = 0.062
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 5/122 (4%)
Frame = +1
Query: 181 AEXAEXXARQLQKXXQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVA----ALNRR 348
AE A A ++K +N Q+NG+L + + L+ E+++ N
Sbjct: 1448 AEEASKLAENIKKRANATKNTARDLHHEADQLNGRLAKTDNRLEEREAQIRKDLNLTNEA 1507
Query: 349 IQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLAD-EERMDALENQLKE 525
+ + + E S E R++ N SL D E R+ A E +L++
Sbjct: 1508 KEKVGQAQLNSNEAKSQVDKAMREVSLIMSELANLREIDVN-SLDDLERRLSAAEKELED 1566
Query: 526 AR 531
A+
Sbjct: 1567 AQ 1568
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 29.9 bits (64), Expect = 0.082
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 3/151 (1%)
Frame = +1
Query: 154 QQAKXANLRAEXAEXXARQLQKXXQTIENELDQTQESLMQVNG---KLEEKEKALQNAES 324
Q+ + N E E A +L++ + ++ +L + Q++ M+V K +E L N +
Sbjct: 634 QRGQIENSIKELQERCA-ELREQKRDLQEQLSKYQQTKMKVKRQEQKCKELTARLVNVDE 692
Query: 325 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDA 504
E R + A + + AS+ D E+ ++ E R+ E
Sbjct: 693 EKVKFERSCRTIIEQLLDQQRRKVAALERYAAASREHDLLEQRIRLFEERNNDREANFRL 752
Query: 505 LENQLKEARFLAEEADKKYDEVARKLAMVEA 597
LE+ + A+ K V +KLA V+A
Sbjct: 753 LEDAYQSAK-------KTLANVEKKLAEVKA 776
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 26.6 bits (56), Expect = 0.77
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = +1
Query: 439 ESERARKVLENRSLADEERMDALE-------NQLKEARFLAEEADKKYDEV 570
+ E + E + ADEE D E ++L+EAR +AEE +++ E+
Sbjct: 76 DEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 25.8 bits (54), Expect = 1.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 709 PXRLPEISGCYQRHGAPPQAQRFWIRQTRHA 617
P + E + C+QR+ A P+A R IR+ A
Sbjct: 844 PLLIKEDARCHQRYLADPEASRAVIRREERA 874
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 24.6 bits (51), Expect = 3.1
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = -2
Query: 547 PPQRGTWLPSADSRGRP--CAP--HPPTTCSRAP 458
PP R W P GRP P H PTT + AP
Sbjct: 90 PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 24.2 bits (50), Expect = 4.1
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +1
Query: 412 LSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMV 591
L E + E E R +E DAL+ + E L +E K+YDE+
Sbjct: 315 LCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDELVSAKESK 374
Query: 592 EADL 603
E+ L
Sbjct: 375 ESTL 378
Score = 24.2 bits (50), Expect = 4.1
Identities = 20/101 (19%), Positives = 39/101 (38%)
Frame = +1
Query: 235 ENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKL 414
E+EL Q + KLE + + E ++ R+Q TA KL
Sbjct: 491 ESELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKL 550
Query: 415 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFL 537
E + E + + ++ + +E M A+++ + + L
Sbjct: 551 QENANEERELTQTLRAVQGKL---QESMAAMQSTRSQGKVL 588
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 24.2 bits (50), Expect = 4.1
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -2
Query: 484 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPR 380
PP S PY+ IHR P R + + PR
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPR 264
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.307 0.119 0.295
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 545,109
Number of Sequences: 2352
Number of extensions: 10093
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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