Silkworm BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0062
         (901 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   3.1  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   5.5  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 734 SPNSQRRQEGHARHFCWIRSSRTGGSG 654
           SP  Q++Q+ H +H C  R S  GG G
Sbjct: 275 SPKEQQQQQ-HGQH-CCCRGSHCGGGG 299


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +2

Query: 821 FRITFLYAFAVQQGRTQFRRVHTG 892
           F  TF YAF   +  TQF   H+G
Sbjct: 165 FGNTFRYAFLATEPGTQFYHSHSG 188


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,680
Number of Sequences: 2352
Number of extensions: 17646
Number of successful extensions: 28
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)