Silkworm BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0029
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   1.5  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   6.1  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = +1

Query: 379 TYFKCIKV*ID*SIVLYLLYEIHYPKMKQNHQSCDSTQILYL 504
           TYF CI   +  S+V  +L   ++ +    H+  D  ++++L
Sbjct: 311 TYFNCIMFMVASSVVSTILILNYHHRNADTHEMSDWVRVIFL 352


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 10/42 (23%), Positives = 22/42 (52%)
 Frame = +1

Query: 379 TYFKCIKV*ID*SIVLYLLYEIHYPKMKQNHQSCDSTQILYL 504
           TYF CI   +  S+V  +L   ++ +    H+  +  ++++L
Sbjct: 279 TYFNCIMFMVASSVVSTILILNYHHRNSDTHEMSEWIRVVFL 320


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,077
Number of Sequences: 2352
Number of extensions: 8928
Number of successful extensions: 8
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)