Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021026
(763 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 43 9e-06
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 29 0.12
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 29 0.12
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 28 0.27
AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse t... 28 0.36
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 27 0.83
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 26 1.1
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 26 1.1
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 25 3.4
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 24 4.5
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 23 7.8
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 43.2 bits (97), Expect = 9e-06
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +1
Query: 535 YACPHCSAVYENSKSLHAHMKIHKPKQDNNAEAPLTYECELCCTVFSTNKSLKLHKRMH 711
+ CPHC+ + L HM+IH E P Y C++C F+ + SLK HK +H
Sbjct: 240 FQCPHCTYASPDKFKLTRHMRIH------TGEKP--YSCDVCFARFTQSNSLKAHKMIH 290
Score = 35.5 bits (78), Expect = 0.002
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +1
Query: 535 YACPHCSAVYENSKSLHAHMKI-HKPKQDNNAEAPLTYECELCCTVFSTNKSLKLHKRMH 711
Y C C+ + + L HM H P T+ C C F +L H MH
Sbjct: 383 YKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLIRHMAMH 442
Query: 712 DPQ 720
DP+
Sbjct: 443 DPE 445
Score = 35.1 bits (77), Expect = 0.002
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 535 YACPHCSAVYENSKSLHAHMKIHKPKQDNNAEAPLTYECELCCTVFSTNKSLKLH-KRMH 711
Y+C C A + S SL AH IH Q N ++C+LC T L++H + +H
Sbjct: 268 YSCDVCFARFTQSNSLKAHKMIH---QVGNKP---VFQCKLCPTTCGRKTDLRIHVQNLH 321
Query: 712 DPQK 723
K
Sbjct: 322 TADK 325
Score = 27.9 bits (59), Expect = 0.36
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = +1
Query: 541 CPHCSAVYENSKSLHAHMKIHKPKQDNNAEAPLTYECELCCTVFSTNKSLKLHKRMHDPQ 720
C C + + + S H K H E Y CE C + + L+ H +H Q
Sbjct: 329 CKRCDSTFPDRYSYKMHAKTH--------EGEKCYRCEYCPYASISMRHLESHLLLHTDQ 380
Query: 721 K 723
K
Sbjct: 381 K 381
Score = 25.8 bits (54), Expect = 1.5
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 523 KILKYACPHCSAVYENSKSLHAHMKIHKPKQDNNAE 630
K + CP C + + +L HM +H P+ + E
Sbjct: 416 KAKTHICPTCKRPFRHKGNLIRHMAMHDPESTVSKE 451
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 29.5 bits (63), Expect = 0.12
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 138 YDPMQTEDENG--QDKQISRRVITETGDILEAPLLTNSNP 251
+ P + NG + SRR+IT TG +L+ P +NS+P
Sbjct: 837 HQPSAVSNSNGLARHNSKSRRLITATGGMLKMPPSSNSSP 876
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 29.5 bits (63), Expect = 0.12
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 111 LVPVLSKVFETVFLKRLKPLFDQEKIIPDPQFGFR 7
L+ VL K+ E + +RL + + DPQ+GFR
Sbjct: 495 LLSVLGKILERLIQRRLTTHLESTGGLSDPQYGFR 529
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 28.3 bits (60), Expect = 0.27
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 532 KYACPHCSAVYENSKSLHAHMKIHKP 609
++ CP C A Y S +L H K P
Sbjct: 523 RFECPLCRATYTRSDNLRTHCKFKHP 548
Score = 23.8 bits (49), Expect = 5.9
Identities = 8/28 (28%), Positives = 15/28 (53%)
Frame = +1
Query: 634 PLTYECELCCTVFSTNKSLKLHKRMHDP 717
P +EC LC ++ + +L+ H + P
Sbjct: 521 PGRFECPLCRATYTRSDNLRTHCKFKHP 548
>AJ970245-1|CAI96717.1| 134|Anopheles gambiae putative reverse
transcriptase protein.
Length = 134
Score = 27.9 bits (59), Expect = 0.36
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 111 LVPVLSKVFETVFLKRLKPLFDQEKIIPDPQFGFR 7
L+ L K+FE + R+ IIP QFGFR
Sbjct: 7 LLSCLGKIFEKLLESRMALHTFNNNIIPKSQFGFR 41
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 26.6 bits (56), Expect = 0.83
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = +1
Query: 622 NAEAPLTYECELCCTVFSTNKSLKLHKRMHDPQ 720
N P ++EC +C F+ ++K H ++ P+
Sbjct: 916 NIHRPQSHECPVCGQKFTRRDNMKAHCKVKHPE 948
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 26.2 bits (55), Expect = 1.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 541 CPHCSAVYENSKSLHAHMKIHKPKQDNNAEAPLTYECEL 657
CP+C A Y +L +H++I + N + C+L
Sbjct: 553 CPYCPASYSRIDTLRSHLRIKHADRLNAPKFSNPPNCKL 591
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 26.2 bits (55), Expect = 1.1
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 541 CPHCSAVYENSKSLHAHMKIHKPKQDNNAEAPLTYECEL 657
CP+C A Y +L +H++I + N + C+L
Sbjct: 529 CPYCPASYSRIDTLRSHLRIKHADRLNAPKFSNPPNCKL 567
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 24.6 bits (51), Expect = 3.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 93 KVFETVFLKRLKPLFDQEKIIPDPQFGFRAK 1
K E + ++RL ++ + D QFGFR++
Sbjct: 485 KGLERIIVQRLNAHIEEVNGLSDDQFGFRSR 515
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 24.2 bits (50), Expect = 4.5
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 73 KDRFKYLRQYR 105
KDR KYLR+YR
Sbjct: 345 KDRMKYLRRYR 355
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 23.4 bits (48), Expect = 7.8
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = +1
Query: 535 YACPHCSAVYENSKSLHAHMKIHKPKQDNNAEA 633
Y CP C ++ + + H P QD A A
Sbjct: 292 YRCPACGNLFVELTNFYNHSCTKAPAQDGVAVA 324
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,549
Number of Sequences: 2352
Number of extensions: 17696
Number of successful extensions: 47
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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