Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30094
         (751 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC025275-1|AAH25275.1|  483|Homo sapiens ATPase, H+ transporting...    68   3e-11
AF298777-1|AAG22809.1|  483|Homo sapiens vacuolar ATPase subunit...    68   3e-11
AF132945-1|AAD27720.1|  483|Homo sapiens CGI-11 protein protein.       68   3e-11
AF112204-1|AAF17192.1|  483|Homo sapiens Vacuolar proton pump su...    68   3e-11
AF125105-1|AAL75942.1|  476|Homo sapiens vacuolar proton pump su...    66   2e-10
BC005056-1|AAH05056.1|  226|Homo sapiens Williams Beuren syndrom...    33   1.4  

>BC025275-1|AAH25275.1|  483|Homo sapiens ATPase, H+ transporting,
           lysosomal 50/57kDa, V1 subunit H protein.
          Length = 483

 Score = 68.1 bits (159), Expect = 3e-11
 Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = +2

Query: 329 CAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGN-VWQPFLNLLNR 502
           CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +LNR
Sbjct: 73  CAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNR 132

Query: 503 QD 508
           QD
Sbjct: 133 QD 134



 Score = 47.2 bits (107), Expect = 6e-05
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +1

Query: 511 FVQHMTARIIAKLACWHPQLMDKSDLHFYLSW 606
           F  HM ARIIAKLA W  +LM+ SDL++Y +W
Sbjct: 136 FTVHMAARIIAKLAAWGKELMEGSDLNYYFNW 167



 Score = 40.3 bits (90), Expect = 0.007
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +3

Query: 153 IDMIAATSVLQIRASEIRQTQINWQSYLQSQM 248
           +D    T+++  +A+E+R  ++NWQSYLQ QM
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQM 41


>AF298777-1|AAG22809.1|  483|Homo sapiens vacuolar ATPase subunit H
           protein.
          Length = 483

 Score = 68.1 bits (159), Expect = 3e-11
 Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = +2

Query: 329 CAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGN-VWQPFLNLLNR 502
           CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +LNR
Sbjct: 73  CAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNR 132

Query: 503 QD 508
           QD
Sbjct: 133 QD 134



 Score = 47.2 bits (107), Expect = 6e-05
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +1

Query: 511 FVQHMTARIIAKLACWHPQLMDKSDLHFYLSW 606
           F  HM ARIIAKLA W  +LM+ SDL++Y +W
Sbjct: 136 FTVHMAARIIAKLAAWGKELMEGSDLNYYFNW 167



 Score = 40.3 bits (90), Expect = 0.007
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +3

Query: 153 IDMIAATSVLQIRASEIRQTQINWQSYLQSQM 248
           +D    T+++  +A+E+R  ++NWQSYLQ QM
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQM 41


>AF132945-1|AAD27720.1|  483|Homo sapiens CGI-11 protein protein.
          Length = 483

 Score = 68.1 bits (159), Expect = 3e-11
 Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = +2

Query: 329 CAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGN-VWQPFLNLLNR 502
           CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +LNR
Sbjct: 73  CAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPILNR 132

Query: 503 QD 508
           QD
Sbjct: 133 QD 134



 Score = 47.2 bits (107), Expect = 6e-05
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +1

Query: 511 FVQHMTARIIAKLACWHPQLMDKSDLHFYLSW 606
           F  HM ARIIAKLA W  +LM+ SDL++Y +W
Sbjct: 136 FTVHMAARIIAKLAAWGKELMEGSDLNYYFNW 167



 Score = 40.3 bits (90), Expect = 0.007
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +3

Query: 153 IDMIAATSVLQIRASEIRQTQINWQSYLQSQM 248
           +D    T+++  +A+E+R  ++NWQSYLQ QM
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQM 41


>AF112204-1|AAF17192.1|  483|Homo sapiens Vacuolar proton pump
           subunit SFD alpha isoform protein.
          Length = 483

 Score = 68.1 bits (159), Expect = 3e-11
 Identities = 32/62 (51%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
 Frame = +2

Query: 329 CAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGN-VWQPFLNLLNR 502
           CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +LNR
Sbjct: 73  CAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNR 132

Query: 503 QD 508
           QD
Sbjct: 133 QD 134



 Score = 47.2 bits (107), Expect = 6e-05
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +1

Query: 511 FVQHMTARIIAKLACWHPQLMDKSDLHFYLSW 606
           F  HM ARIIAKLA W  +LM+ SDL++Y +W
Sbjct: 136 FTVHMAARIIAKLAAWGKELMEGSDLNYYFNW 167



 Score = 40.3 bits (90), Expect = 0.007
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +3

Query: 153 IDMIAATSVLQIRASEIRQTQINWQSYLQSQM 248
           +D    T+++  +A+E+R  ++NWQSYLQ QM
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQM 41


>AF125105-1|AAL75942.1|  476|Homo sapiens vacuolar proton pump
           subunit SFD alpha isoform protein.
          Length = 476

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
 Frame = +2

Query: 329 CAEVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRE-TKFSGN-VWQPFLNLLNR 502
           CA+ F+NL+THI K+ T+QYIL ++DD+L E+  RV IF +  + S N  W  FL +LNR
Sbjct: 73  CAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNR 132

Query: 503 Q 505
           Q
Sbjct: 133 Q 133



 Score = 47.2 bits (107), Expect = 6e-05
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +1

Query: 511 FVQHMTARIIAKLACWHPQLMDKSDLHFYLSW 606
           F  HM ARIIAKLA W  +LM+ SDL++Y +W
Sbjct: 136 FTVHMAARIIAKLAAWGKELMEGSDLNYYFNW 167



 Score = 40.3 bits (90), Expect = 0.007
 Identities = 14/32 (43%), Positives = 23/32 (71%)
 Frame = +3

Query: 153 IDMIAATSVLQIRASEIRQTQINWQSYLQSQM 248
           +D    T+++  +A+E+R  ++NWQSYLQ QM
Sbjct: 10  VDAAVPTNIIAAKAAEVRANKVNWQSYLQGQM 41


>BC005056-1|AAH05056.1|  226|Homo sapiens Williams Beuren syndrome
           chromosome region 18 protein.
          Length = 226

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
 Frame = -3

Query: 698 MPPTLTLATAMPLNSAVNF-LRALVLELNL*AQER*KCKSLLSISCGCQQASLAMMRAVM 522
           +P  L  A   P NSA +  LRA        +  R     LL +     QA +       
Sbjct: 13  LPWRLLQARGFPQNSAPSLGLRARTYSQGDCSYSRTALYDLLGVPSTATQAQIKAAYYRQ 72

Query: 521 CWTNYPDGSANSGRAAKRCQRISSHEISSPSIYLQKE 411
           C+  +PD ++ S  AA+R  RIS   +   S  L+++
Sbjct: 73  CFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRK 109


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,480,237
Number of Sequences: 237096
Number of extensions: 2182618
Number of successful extensions: 4046
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4042
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)