Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30085
         (848 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110894-1|AAI10895.1|  554|Homo sapiens DnaJ (Hsp40) homolog, s...    31   7.0  
AY225122-1|AAP50497.1|  554|Homo sapiens MTJ1-like protein protein.    31   7.0  
AL445431-3|CAI13668.1|  554|Homo sapiens DnaJ (Hsp40) homolog, s...    31   7.0  
AL359697-3|CAH73412.1|  554|Homo sapiens DnaJ (Hsp40) homolog, s...    31   7.0  
AK027263-1|BAB55004.1|  554|Homo sapiens protein ( Homo sapiens ...    31   7.0  

>BC110894-1|AAI10895.1|  554|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 1 protein.
          Length = 554

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
 Frame = +2

Query: 383 LIMKTEEH--I*AKGSIWTVMILMKPIHLLLNRHHVSYKRKKSNFQSKK*SLHLRDRNRL 556
           L+MK + H  +  K  IW  + L    HL+ +      K K++  + K+ +L   +   L
Sbjct: 213 LLMKPQWHDLLPCKLGIWFCLTLKALPHLIQDAGQFYAKYKETRLKEKEDALTRTELETL 272

Query: 557 GPEEEADPPRDETAHYHPHAAFDENSSNISTSRIKVQRVERQE*WKLSKRSRMDQGNSKE 736
             +++   P+ E   Y P       S +  TS  +++  E+ + W L  R+R  +   K+
Sbjct: 273 QKQKKVKKPKPEFPVYTPLETTYIQSYDHGTSIEEIE--EQMDDW-LENRNRTQK---KQ 326

Query: 737 LPGW 748
            P W
Sbjct: 327 APEW 330


>AY225122-1|AAP50497.1|  554|Homo sapiens MTJ1-like protein protein.
          Length = 554

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
 Frame = +2

Query: 383 LIMKTEEH--I*AKGSIWTVMILMKPIHLLLNRHHVSYKRKKSNFQSKK*SLHLRDRNRL 556
           L+MK + H  +  K  IW  + L    HL+ +      K K++  + K+ +L   +   L
Sbjct: 213 LLMKPQWHDLLPCKLGIWFCLTLKALPHLIQDAGQFYAKYKETRLKEKEDALTRTELETL 272

Query: 557 GPEEEADPPRDETAHYHPHAAFDENSSNISTSRIKVQRVERQE*WKLSKRSRMDQGNSKE 736
             +++   P+ E   Y P       S +  TS  +++  E+ + W L  R+R  +   K+
Sbjct: 273 QKQKKVKKPKPEFPVYTPLETTYIQSYDHGTSIEEIE--EQMDDW-LENRNRTQK---KQ 326

Query: 737 LPGW 748
            P W
Sbjct: 327 APEW 330


>AL445431-3|CAI13668.1|  554|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 1 protein.
          Length = 554

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
 Frame = +2

Query: 383 LIMKTEEH--I*AKGSIWTVMILMKPIHLLLNRHHVSYKRKKSNFQSKK*SLHLRDRNRL 556
           L+MK + H  +  K  IW  + L    HL+ +      K K++  + K+ +L   +   L
Sbjct: 213 LLMKPQWHDLLPCKLGIWFCLTLKALPHLIQDAGQFYAKYKETRLKEKEDALTRTELETL 272

Query: 557 GPEEEADPPRDETAHYHPHAAFDENSSNISTSRIKVQRVERQE*WKLSKRSRMDQGNSKE 736
             +++   P+ E   Y P       S +  TS  +++  E+ + W L  R+R  +   K+
Sbjct: 273 QKQKKVKKPKPEFPVYTPLETTYIQSYDHGTSIEEIE--EQMDDW-LENRNRTQK---KQ 326

Query: 737 LPGW 748
            P W
Sbjct: 327 APEW 330


>AL359697-3|CAH73412.1|  554|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 1 protein.
          Length = 554

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
 Frame = +2

Query: 383 LIMKTEEH--I*AKGSIWTVMILMKPIHLLLNRHHVSYKRKKSNFQSKK*SLHLRDRNRL 556
           L+MK + H  +  K  IW  + L    HL+ +      K K++  + K+ +L   +   L
Sbjct: 213 LLMKPQWHDLLPCKLGIWFCLTLKALPHLIQDAGQFYAKYKETRLKEKEDALTRTELETL 272

Query: 557 GPEEEADPPRDETAHYHPHAAFDENSSNISTSRIKVQRVERQE*WKLSKRSRMDQGNSKE 736
             +++   P+ E   Y P       S +  TS  +++  E+ + W L  R+R  +   K+
Sbjct: 273 QKQKKVKKPKPEFPVYTPLETTYIQSYDHGTSIEEIE--EQMDDW-LENRNRTQK---KQ 326

Query: 737 LPGW 748
            P W
Sbjct: 327 APEW 330


>AK027263-1|BAB55004.1|  554|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14357 fis, clone HEMBA1000005, highly similar to
           DNAJ PROTEIN HOMOLOG MTJ1. ).
          Length = 554

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
 Frame = +2

Query: 383 LIMKTEEH--I*AKGSIWTVMILMKPIHLLLNRHHVSYKRKKSNFQSKK*SLHLRDRNRL 556
           L+MK + H  +  K  IW  + L    HL+ +      K K++  + K+ +L   +   L
Sbjct: 213 LLMKPQWHDLLPCKLGIWFCLTLKALPHLIQDAGQFYAKYKETRLKEKEDALTRTELETL 272

Query: 557 GPEEEADPPRDETAHYHPHAAFDENSSNISTSRIKVQRVERQE*WKLSKRSRMDQGNSKE 736
             +++   P+ E   Y P       S +  TS  +++  E+ + W L  R+R  +   K+
Sbjct: 273 QKQKKVKKPKPEFPVYTPLETTYIQSYDHGTSIEEIE--EQMDDW-LENRNRTQK---KQ 326

Query: 737 LPGW 748
            P W
Sbjct: 327 APEW 330


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,295,920
Number of Sequences: 237096
Number of extensions: 2485846
Number of successful extensions: 6464
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6453
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)