Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesV0059.Seq
         (299 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21 pro...   101   3e-22
CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.               101   3e-22
BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21 p...   101   3e-22
AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21 p...   101   3e-22
AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21 p...   101   3e-22
AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21 p...   101   3e-22
BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.        98   4e-21
AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21 p...    76   2e-14
AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21 p...    73   2e-13
BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.        54   6e-08
AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21 p...    54   6e-08
X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation f...    50   1e-06

>L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score =  101 bits (243), Expect = 3e-22
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRXMGESDDCI 182
           DLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIR MGESDD I
Sbjct: 10  DLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSI 69

Query: 183 VRLTKXXGXLAKNY 224
           +RL K  G ++KN+
Sbjct: 70  LRLAKADGIVSKNF 83


>CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.
          Length = 83

 Score =  101 bits (243), Expect = 3e-22
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRXMGESDDCI 182
           DLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIR MGESDD I
Sbjct: 10  DLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSI 69

Query: 183 VRLTKXXGXLAKNY 224
           +RL K  G ++KN+
Sbjct: 70  LRLAKADGIVSKNF 83


>BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score =  101 bits (243), Expect = 3e-22
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRXMGESDDCI 182
           DLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIR MGESDD I
Sbjct: 10  DLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSI 69

Query: 183 VRLTKXXGXLAKNY 224
           +RL K  G ++KN+
Sbjct: 70  LRLAKADGIVSKNF 83


>AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score =  101 bits (243), Expect = 3e-22
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRXMGESDDCI 182
           DLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIR MGESDD I
Sbjct: 10  DLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSI 69

Query: 183 VRLTKXXGXLAKNY 224
           +RL K  G ++KN+
Sbjct: 70  LRLAKADGIVSKNF 83


>AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score =  101 bits (243), Expect = 3e-22
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRXMGESDDCI 182
           DLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIR MGESDD I
Sbjct: 10  DLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSI 69

Query: 183 VRLTKXXGXLAKNY 224
           +RL K  G ++KN+
Sbjct: 70  LRLAKADGIVSKNF 83


>AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score =  101 bits (243), Expect = 3e-22
 Identities = 46/74 (62%), Positives = 56/74 (75%)
 Frame = +3

Query: 3   DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRXMGESDDCI 182
           DLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIR MGESDD I
Sbjct: 10  DLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSI 69

Query: 183 VRLTKXXGXLAKNY 224
           +RL K  G ++KN+
Sbjct: 70  LRLAKADGIVSKNF 83


>BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.
          Length = 81

 Score = 98.3 bits (234), Expect = 4e-21
 Identities = 45/72 (62%), Positives = 54/72 (75%)
 Frame = +3

Query: 3   DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRXMGESDDCI 182
           DLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIR MGESDD I
Sbjct: 10  DLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSI 69

Query: 183 VRLTKXXGXLAK 218
           +RL K  G ++K
Sbjct: 70  LRLAKADGIVSK 81


>AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21
           protein.
          Length = 90

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 34/53 (64%), Positives = 40/53 (75%)
 Frame = +3

Query: 3   DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRXM 161
           DLY PRKCSASNR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIR M
Sbjct: 10  DLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRM 62


>AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21
           protein.
          Length = 54

 Score = 72.5 bits (170), Expect = 2e-13
 Identities = 33/54 (61%), Positives = 40/54 (74%)
 Frame = +3

Query: 36  NRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRXMGESDDCIVRLTK 197
           NR+I AKDHAS+Q+ +A+VD  TGR     K Y +CGAIR MGESDD I+RL K
Sbjct: 1   NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54


>BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.
          Length = 66

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +3

Query: 3   DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 110
           DLY PRKCSASNR+I AKDHAS+Q+ +A+V    GR
Sbjct: 10  DLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45


>AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21
           protein.
          Length = 66

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +3

Query: 3   DLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 110
           DLY PRKCSASNR+I AKDHAS+Q+ +A+V    GR
Sbjct: 10  DLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45


>X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation
          factor protein.
          Length = 97

 Score = 50.0 bits (114), Expect = 1e-06
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = +3

Query: 3  DLYCPRKCSASNRLIHAKDHASVQLVIA 86
          DLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 10 DLYVPRKCSASNRIIGAKDHASIQMNVA 37


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,210,774
Number of Sequences: 237096
Number of extensions: 505860
Number of successful extensions: 942
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)