Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0077
         (449 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035604-1|AAH35604.1|  489|Homo sapiens C9orf97 protein protein.      29   5.5  
BC022958-1|AAH22958.1|  106|Homo sapiens C9orf97 protein protein.      29   5.5  
AL162385-7|CAI12860.1|  516|Homo sapiens chromosome 9 open readi...    29   5.5  
AL162385-3|CAI12856.1|  112|Homo sapiens chromosome 9 open readi...    29   5.5  
AK128615-1|BAC87530.1|  516|Homo sapiens protein ( Homo sapiens ...    29   5.5  
AK056752-1|BAB71271.1|  164|Homo sapiens protein ( Homo sapiens ...    29   5.5  
AK056453-1|BAB71188.1|  290|Homo sapiens protein ( Homo sapiens ...    29   5.5  

>BC035604-1|AAH35604.1|  489|Homo sapiens C9orf97 protein protein.
          Length = 489

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 283 EIILSCGPSCAGRGFXLASEDAPSRGTRQTSG 188
           +++L+C P+C G+GF         +G+R+ SG
Sbjct: 412 QLVLTC-PACQGQGFTACCVTCQDKGSRKVSG 442


>BC022958-1|AAH22958.1|  106|Homo sapiens C9orf97 protein protein.
          Length = 106

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 283 EIILSCGPSCAGRGFXLASEDAPSRGTRQTSG 188
           +++L+C P+C G+GF         +G+R+ SG
Sbjct: 29  QLVLTC-PACQGQGFTACCVTCQDKGSRKVSG 59


>AL162385-7|CAI12860.1|  516|Homo sapiens chromosome 9 open reading
           frame 97 protein.
          Length = 516

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 283 EIILSCGPSCAGRGFXLASEDAPSRGTRQTSG 188
           +++L+C P+C G+GF         +G+R+ SG
Sbjct: 439 QLVLTC-PACQGQGFTACCVTCQDKGSRKVSG 469


>AL162385-3|CAI12856.1|  112|Homo sapiens chromosome 9 open reading
           frame 97 protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 283 EIILSCGPSCAGRGFXLASEDAPSRGTRQTSG 188
           +++L+C P+C G+GF         +G+R+ SG
Sbjct: 35  QLVLTC-PACQGQGFTACCVTCQDKGSRKVSG 65


>AK128615-1|BAC87530.1|  516|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46774 fis, clone TRACH3026303. ).
          Length = 516

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 283 EIILSCGPSCAGRGFXLASEDAPSRGTRQTSG 188
           +++L+C P+C G+GF         +G+R+ SG
Sbjct: 439 QLVLTC-PACQGQGFTACCVTCQDKGSRKVSG 469


>AK056752-1|BAB71271.1|  164|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32190 fis, clone PLACE6002102. ).
          Length = 164

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 283 EIILSCGPSCAGRGFXLASEDAPSRGTRQTSG 188
           +++L+C P+C G+GF         +G+R+ SG
Sbjct: 87  QLVLTC-PACQGQGFTACCVTCQDKGSRKVSG 117


>AK056453-1|BAB71188.1|  290|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31891 fis, clone NT2RP7003304, weakly similar to
           YceA protein homolog ybfQ. ).
          Length = 290

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 283 EIILSCGPSCAGRGFXLASEDAPSRGTRQTSG 188
           +++L+C P+C G+GF         +G+R+ SG
Sbjct: 213 QLVLTC-PACQGQGFTACCVTCQDKGSRKVSG 243


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,103,026
Number of Sequences: 237096
Number of extensions: 1237165
Number of successful extensions: 2373
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2373
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)