Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= tesS0070
         (594 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK126859-1|BAC86725.1|  131|Homo sapiens protein ( Homo sapiens ...    31   4.1  
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot...    30   5.4  
Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding p...    30   7.1  
AF051345-1|AAC39880.2| 1624|Homo sapiens latent transforming gro...    30   7.1  
AF051344-1|AAC39879.2| 1557|Homo sapiens latent transforming gro...    30   7.1  

>AK126859-1|BAC86725.1|  131|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44911 fis, clone BRAMY3009158. ).
          Length = 131

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = -3

Query: 283 SXHTAEGVSPVPSNKSCKLHLHQXELH 203
           S H A+GVSP P   + K+HL Q  LH
Sbjct: 25  SDHEAQGVSPGPHLSAGKVHLGQLPLH 51


>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein protein.
          Length = 1569

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 181  FQRVWXDAQCS*-GKQVVAVCMDFFHSSLYHIPKHRTL*XNAC 56
            F+R W + +CS    Q  A C    HS +YH+P +     +AC
Sbjct: 1051 FRRSWAERKCSVINSQTFATC----HSKVYHLPYYEACVRDAC 1089


>Y13622-1|CAA73944.1| 1587|Homo sapiens latent TGF-beta binding
           protein-4 protein.
          Length = 1587

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 2/84 (2%)
 Frame = +1

Query: 64  CXTAYGALVCGTDYCEKNPCIQPPLVC-PKNTEHRXRHAGKXAC-CPACVTXLGEGATCK 237
           C   +    C  D  E   C Q P  C P   ++    AG   C CPA     G GA C+
Sbjct: 661 CPAGFRGSACEEDVDE---CAQEPPPCGPGRCDNT---AGSFHCACPAGFRSRGPGAPCQ 714

Query: 238 IYSKELAKPPPLCVRSLSNASKEF 309
              +    PPP       N    F
Sbjct: 715 DVDECARSPPPCTYGRCENTEGSF 738


>AF051345-1|AAC39880.2| 1624|Homo sapiens latent transforming growth
           factor-beta binding protein 4L protein.
          Length = 1624

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 2/84 (2%)
 Frame = +1

Query: 64  CXTAYGALVCGTDYCEKNPCIQPPLVC-PKNTEHRXRHAGKXAC-CPACVTXLGEGATCK 237
           C   +    C  D  E   C Q P  C P   ++    AG   C CPA     G GA C+
Sbjct: 698 CPAGFRGSACEEDVDE---CAQEPPPCGPGRCDNT---AGSFHCACPAGFRSRGPGAPCQ 751

Query: 238 IYSKELAKPPPLCVRSLSNASKEF 309
              +    PPP       N    F
Sbjct: 752 DVDECARSPPPCTYGRCENTEGSF 775


>AF051344-1|AAC39879.2| 1557|Homo sapiens latent transforming growth
           factor-beta binding protein 4S protein.
          Length = 1557

 Score = 29.9 bits (64), Expect = 7.1
 Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 2/84 (2%)
 Frame = +1

Query: 64  CXTAYGALVCGTDYCEKNPCIQPPLVC-PKNTEHRXRHAGKXAC-CPACVTXLGEGATCK 237
           C   +    C  D  E   C Q P  C P   ++    AG   C CPA     G GA C+
Sbjct: 631 CPAGFRGSACEEDVDE---CAQEPPPCGPGRCDNT---AGSFHCACPAGFRSRGPGAPCQ 684

Query: 238 IYSKELAKPPPLCVRSLSNASKEF 309
              +    PPP       N    F
Sbjct: 685 DVDECARSPPPCTYGRCENTEGSF 708


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,220,048
Number of Sequences: 237096
Number of extensions: 1635961
Number of successful extensions: 3076
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3076
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6268037466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)