Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= tesS0054
(484 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 31 2.8
AY867077-1|AAW68950.1| 107|Homo sapiens anti-tetanus toxoid imm... 29 6.5
AY866996-1|AAW68872.1| 107|Homo sapiens anti-tetanus toxoid imm... 29 6.5
U43573-1|AAC50513.1| 743|Homo sapiens alpha-N-acetylglucosamini... 29 8.6
U43572-1|AAC50512.1| 743|Homo sapiens alpha-N-acetylglucosamini... 29 8.6
U40846-1|AAB06188.1| 743|Homo sapiens alpha-N-acetylglucosamini... 29 8.6
L78465-1|AAB36605.1| 639|Homo sapiens alpha-N-acetylglucosamini... 29 8.6
L78464-1|AAB36604.1| 743|Homo sapiens alpha-N-acetylglucosamini... 29 8.6
BC053991-1|AAH53991.1| 743|Homo sapiens N-acetylglucosaminidase... 29 8.6
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/46 (41%), Positives = 23/46 (50%)
Frame = -2
Query: 315 STSILVRGASLGNGDSVTSNAIAVLIWVWRLTDHLTTASNGSDSSS 178
STS ASL + DS S A+ W+W LT L T + S S S
Sbjct: 2025 STSSPYSSASLESLDSTISRRNAITSWLWDLTTSLPTTTWPSTSLS 2070
>AY867077-1|AAW68950.1| 107|Homo sapiens anti-tetanus toxoid
immunoglobulin light chain variable region protein.
Length = 107
Score = 29.5 bits (63), Expect = 6.5
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2
Query: 207 TASNGSDSSSRGTEYSTTCRTARRAYSKARMACDTGGKASWLLKAWLF*VLKTGVKFRY 31
T S S S+S G +TTCRT++ + GKA LL + L+TGV R+
Sbjct: 5 TQSPSSLSASVGDRVTTTCRTSQSIFINLNWFQQKPGKAPKLL-IYSASTLQTGVPSRF 62
>AY866996-1|AAW68872.1| 107|Homo sapiens anti-tetanus toxoid
immunoglobulin light chain variable region protein.
Length = 107
Score = 29.5 bits (63), Expect = 6.5
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = -2
Query: 207 TASNGSDSSSRGTEYSTTCRTARRAYSKARMACDTGGKASWLLKAWLF*VLKTGVKFRY 31
T S S S+S G +TTCRT++ + GKA LL + L+TGV R+
Sbjct: 5 TQSPSSLSASVGDRVTTTCRTSQSIFINLNWFQQKPGKAPKLL-IYSASTLQTGVPSRF 62
>U43573-1|AAC50513.1| 743|Homo sapiens
alpha-N-acetylglucosaminidase protein.
Length = 743
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 222 TDHLTTASNGSDSSSRGTEYSTTCRTARRAYSKARMACDTGGKASWLLKAWLF 64
TDH+ A ++ +E S Y +A A DT +A WLL+ WLF
Sbjct: 305 TDHIYGADTFNEMQPPSSEPSYLAAATTAVY-EAMTAVDT--EAVWLLQGWLF 354
>U43572-1|AAC50512.1| 743|Homo sapiens
alpha-N-acetylglucosaminidase protein.
Length = 743
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 222 TDHLTTASNGSDSSSRGTEYSTTCRTARRAYSKARMACDTGGKASWLLKAWLF 64
TDH+ A ++ +E S Y +A A DT +A WLL+ WLF
Sbjct: 305 TDHIYGADTFNEMQPPSSEPSYLAAATTAVY-EAMTAVDT--EAVWLLQGWLF 354
>U40846-1|AAB06188.1| 743|Homo sapiens
alpha-N-acetylglucosaminidase protein.
Length = 743
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 222 TDHLTTASNGSDSSSRGTEYSTTCRTARRAYSKARMACDTGGKASWLLKAWLF 64
TDH+ A ++ +E S Y +A A DT +A WLL+ WLF
Sbjct: 305 TDHIYGADTFNEMQPPSSEPSYLAAATTAVY-EAMTAVDT--EAVWLLQGWLF 354
>L78465-1|AAB36605.1| 639|Homo sapiens
alpha-N-acetylglucosaminidase protein.
Length = 639
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 222 TDHLTTASNGSDSSSRGTEYSTTCRTARRAYSKARMACDTGGKASWLLKAWLF 64
TDH+ A ++ +E S Y +A A DT +A WLL+ WLF
Sbjct: 201 TDHIYGADTFNEMQPPSSEPSYLAAATTAVY-EAMTAVDT--EAVWLLQGWLF 250
>L78464-1|AAB36604.1| 743|Homo sapiens
alpha-N-acetylglucosaminidase protein.
Length = 743
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 222 TDHLTTASNGSDSSSRGTEYSTTCRTARRAYSKARMACDTGGKASWLLKAWLF 64
TDH+ A ++ +E S Y +A A DT +A WLL+ WLF
Sbjct: 305 TDHIYGADTFNEMQPPSSEPSYLAAATTAVY-EAMTAVDT--EAVWLLQGWLF 354
>BC053991-1|AAH53991.1| 743|Homo sapiens N-acetylglucosaminidase,
alpha- (Sanfilippo disease IIIB) protein.
Length = 743
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 222 TDHLTTASNGSDSSSRGTEYSTTCRTARRAYSKARMACDTGGKASWLLKAWLF 64
TDH+ A ++ +E S Y +A A DT +A WLL+ WLF
Sbjct: 305 TDHIYGADTFNEMQPPSSEPSYLAAATTAVY-EAMTAVDT--EAVWLLQGWLF 354
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,193,889
Number of Sequences: 237096
Number of extensions: 1205378
Number of successful extensions: 4944
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4944
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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