Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0067.Seq
         (825 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69908-1|CAA49533.1|  141|Homo sapiens protein ( H.sapiens gene ...    64   8e-10
X69907-1|CAA49532.1|  136|Homo sapiens P1 gene for c subunit of ...    64   8e-10
U09813-1|AAA78807.1|  142|Homo sapiens mitochondrial ATP synthas...    64   8e-10
M16453-1|AAA51806.1|  100|Homo sapiens ATP5A protein.                  64   8e-10
D13119-1|BAA02421.1|  141|Homo sapiens ATP synthase subunit c pr...    64   8e-10
D13118-1|BAA02420.1|  136|Homo sapiens ATP synthase subunit c pr...    64   8e-10
CR533449-1|CAG38480.1|  136|Homo sapiens ATP5G1 protein.               64   8e-10
CR407601-1|CAG28411.1|  142|Homo sapiens ATP5G3 protein.               64   8e-10
BT007230-1|AAP35894.1|  136|Homo sapiens ATP synthase, H+ transp...    64   8e-10
BC106881-1|AAI06882.1|  142|Homo sapiens ATP synthase, H+ transp...    64   8e-10
BC020826-1|AAH20826.1|  141|Homo sapiens ATP5G2 protein protein.       64   8e-10
BC004963-1|AAH04963.1|  136|Homo sapiens ATP synthase, H+ transp...    64   8e-10
AC096649-1|AAX88970.1|  142|Homo sapiens unknown protein.              64   8e-10
M16439-1|AAA51804.1|   58|Homo sapiens ATP5A protein.                  62   2e-09
AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.       32   2.2  
AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo ...    32   2.2  
AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein.                32   2.2  
AK000219-1|BAA91018.1|  420|Homo sapiens protein ( Homo sapiens ...    31   5.1  
AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar t...    30   8.8  
AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar t...    30   8.8  
AK098809-1|BAC05419.1|  320|Homo sapiens protein ( Homo sapiens ...    30   8.8  

>X69908-1|CAA49533.1|  141|Homo sapiens protein ( H.sapiens gene for
           mitochondrial ATP synthase c subunit (P2 form). ).
          Length = 141

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 95  FGSLIIGYARNPSLKQQLFSYAILGFALSE 124


>X69907-1|CAA49532.1|  136|Homo sapiens P1 gene for c subunit of
           human mitochondrial ATP protein.
          Length = 136

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 90  FGSLIIGYARNPSLKQQLFSYAILGFALSE 119


>U09813-1|AAA78807.1|  142|Homo sapiens mitochondrial ATP synthase
           subunit 9 precursor protein.
          Length = 142

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 96  FGSLIIGYARNPSLKQQLFSYAILGFALSE 125


>M16453-1|AAA51806.1|  100|Homo sapiens ATP5A protein.
          Length = 100

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 54  FGSLIIGYARNPSLKQQLFSYAILGFALSE 83


>D13119-1|BAA02421.1|  141|Homo sapiens ATP synthase subunit c
           precursor protein.
          Length = 141

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 95  FGSLIIGYARNPSLKQQLFSYAILGFALSE 124


>D13118-1|BAA02420.1|  136|Homo sapiens ATP synthase subunit c
           precursor protein.
          Length = 136

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 90  FGSLIIGYARNPSLKQQLFSYAILGFALSE 119


>CR533449-1|CAG38480.1|  136|Homo sapiens ATP5G1 protein.
          Length = 136

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 90  FGSLIIGYARNPSLKQQLFSYAILGFALSE 119


>CR407601-1|CAG28411.1|  142|Homo sapiens ATP5G3 protein.
          Length = 142

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 96  FGSLIIGYARNPSLKQQLFSYAILGFALSE 125


>BT007230-1|AAP35894.1|  136|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit c
           (subunit 9), protein.
          Length = 136

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 90  FGSLIIGYARNPSLKQQLFSYAILGFALSE 119


>BC106881-1|AAI06882.1|  142|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit C3
           (subunit 9) protein.
          Length = 142

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 96  FGSLIIGYARNPSLKQQLFSYAILGFALSE 125


>BC020826-1|AAH20826.1|  141|Homo sapiens ATP5G2 protein protein.
          Length = 141

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 95  FGSLIIGYARNPSLKQQLFSYAILGFALSE 124


>BC004963-1|AAH04963.1|  136|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit C1
           (subunit 9) protein.
          Length = 136

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 90  FGSLIIGYARNPSLKQQLFSYAILGFALSE 119


>AC096649-1|AAX88970.1|  142|Homo sapiens unknown protein.
          Length = 142

 Score = 63.7 bits (148), Expect = 8e-10
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 96  FGSLIIGYARNPSLKQQLFSYAILGFALSE 125


>M16439-1|AAA51804.1|   58|Homo sapiens ATP5A protein.
          Length = 58

 Score = 62.5 bits (145), Expect = 2e-09
 Identities = 29/30 (96%), Positives = 30/30 (100%)
 Frame = +2

Query: 332 FGSLIIGYARNPSLKQQLFSYAILGFALSE 421
           FGSLIIGYARNPSLKQQLFSYAI+GFALSE
Sbjct: 12  FGSLIIGYARNPSLKQQLFSYAIVGFALSE 41


>AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.
          Length = 4186

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -3

Query: 361  PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFG 263
            PG+A+  G   A DC       S++ CRC+ T  FG
Sbjct: 2556 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFG 2591


>AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo 1
            protein.
          Length = 3312

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -3

Query: 361  PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFG 263
            PG+A+  G   A DC       S++ CRC+ T  FG
Sbjct: 2486 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFG 2521


>AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein.
          Length = 1364

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -3

Query: 361 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFG 263
           PG+A+  G   A DC       S++ CRC+ T  FG
Sbjct: 538 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFG 573


>AK000219-1|BAA91018.1|  420|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20212 fis, clone COLF1860. ).
          Length = 420

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 292 CRCTSTNEFGSRVMSLVTDVVWKDRTAESCVG 197
           CRC++  +F     +L+ + +W   T   CVG
Sbjct: 349 CRCSAEPDFSQNKQTLLVEFLWSHTTESMCVG 380


>AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar to
           mouse Jedi soluble isoform 736 protein protein.
          Length = 1037

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 233 GLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQ 99
           G  GP+C + CR        GG C +++ QCR A    PG  GD+
Sbjct: 266 GFHGPNCSQECRCHN-----GGLCDRFTGQCRCA----PGYTGDR 301


>AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar to
           mouse Jedi soluble isoform 736 protein protein.
          Length = 1037

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 233 GLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQ 99
           G  GP+C + CR        GG C +++ QCR A    PG  GD+
Sbjct: 266 GFHGPNCSQECRCHN-----GGLCDRFTGQCRCA----PGYTGDR 301


>AK098809-1|BAC05419.1|  320|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25943 fis, clone JTH10559. ).
          Length = 320

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -2

Query: 233 GLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQ 99
           G  GP+C + CR        GG C +++ QCR A    PG  GD+
Sbjct: 67  GFHGPNCSQECRCHN-----GGLCDRFTGQCRCA----PGYTGDR 102


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,182,787
Number of Sequences: 237096
Number of extensions: 2818562
Number of successful extensions: 11237
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 10582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11233
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)