Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0049.Seq
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60832-1|AAA62822.1|  635|Homo sapiens alpha-2 type VIII collage...    31   7.1  
BC099645-1|AAH99645.1|  657|Homo sapiens COL8A2 protein protein.       31   7.1  
BC096297-1|AAH96297.1|  657|Homo sapiens COL8A2 protein protein.       31   7.1  
BC096296-1|AAH96296.1|  427|Homo sapiens COL8A2 protein protein.       31   7.1  
AL138787-1|CAI22267.1|  703|Homo sapiens collagen type VIII alph...    31   7.1  
AK074129-1|BAB84955.1|  705|Homo sapiens FLJ00201 protein protein.     31   7.1  
AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.     31   7.1  

>M60832-1|AAA62822.1|  635|Homo sapiens alpha-2 type VIII collagen
           protein.
          Length = 635

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 732 GXKVP*RP*IRTLKGAPGFRAXPGEPGEP 818
           G  +P +P  + + G PGF+  PG  GEP
Sbjct: 103 GITIPGKPGAQGVPGPPGFQGEPGPQGEP 131


>BC099645-1|AAH99645.1|  657|Homo sapiens COL8A2 protein protein.
          Length = 657

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 732 GXKVP*RP*IRTLKGAPGFRAXPGEPGEP 818
           G  +P +P  + + G PGF+  PG  GEP
Sbjct: 122 GITIPGKPGAQGVPGPPGFQGEPGPQGEP 150


>BC096297-1|AAH96297.1|  657|Homo sapiens COL8A2 protein protein.
          Length = 657

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 732 GXKVP*RP*IRTLKGAPGFRAXPGEPGEP 818
           G  +P +P  + + G PGF+  PG  GEP
Sbjct: 122 GITIPGKPGAQGVPGPPGFQGEPGPQGEP 150


>BC096296-1|AAH96296.1|  427|Homo sapiens COL8A2 protein protein.
          Length = 427

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 732 GXKVP*RP*IRTLKGAPGFRAXPGEPGEP 818
           G  +P +P  + + G PGF+  PG  GEP
Sbjct: 168 GITIPGKPGAQGVPGPPGFQGEPGPQGEP 196


>AL138787-1|CAI22267.1|  703|Homo sapiens collagen type VIII alpha 2
           protein.
          Length = 703

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 732 GXKVP*RP*IRTLKGAPGFRAXPGEPGEP 818
           G  +P +P  + + G PGF+  PG  GEP
Sbjct: 168 GITIPGKPGAQGVPGPPGFQGEPGPQGEP 196


>AK074129-1|BAB84955.1|  705|Homo sapiens FLJ00201 protein protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 732 GXKVP*RP*IRTLKGAPGFRAXPGEPGEP 818
           G  +P +P  + + G PGF+  PG  GEP
Sbjct: 170 GITIPGKPGAQGVPGPPGFQGEPGPQGEP 198


>AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.
          Length = 1857

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 299  RITIHWP-SFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPN 442
            R+   WP S    +TGK  A  +L+  +    +P G   K P P+A PN
Sbjct: 1749 RVRGWWPFSKSKELTGKVEAEFHLVTAEEAEKNPVGKARKEPEPLAKPN 1797


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,087,624
Number of Sequences: 237096
Number of extensions: 2720444
Number of successful extensions: 15470
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15116
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)