Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0019.Seq
         (451 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064962-1|AAH64962.1|  607|Homo sapiens zinc finger protein 573...    29   7.3  
BC051263-1|AAH51263.1|  295|Homo sapiens ZNF573 protein protein.       29   7.3  
BC042170-1|AAH42170.2|  645|Homo sapiens ZNF573 protein protein.       29   7.3  
BC015418-1|AAH15418.1|  436|Homo sapiens ZNF573 protein protein.       29   7.3  
AK074539-1|BAC11047.1|  577|Homo sapiens protein ( Homo sapiens ...    29   7.3  
AK055483-1|BAB70929.1|  578|Homo sapiens protein ( Homo sapiens ...    29   7.3  
D87454-1|BAA13395.1|  401|Homo sapiens KIAA0265 protein.               29   9.7  
BC036464-1|AAH36464.1|  442|Homo sapiens KIAA0265 protein protein.     29   9.7  
BC009977-1|AAH09977.2|  291|Homo sapiens KIAA0265 protein protein.     29   9.7  

>BC064962-1|AAH64962.1|  607|Homo sapiens zinc finger protein 573
           protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 328 YTGXSRHQNRHDGREIFDC 384
           Y   +RHQN H G+++F+C
Sbjct: 396 YRNLTRHQNIHTGKKLFEC 414


>BC051263-1|AAH51263.1|  295|Homo sapiens ZNF573 protein protein.
          Length = 295

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 328 YTGXSRHQNRHDGREIFDC 384
           Y   +RHQN H G+++F+C
Sbjct: 84  YRNLTRHQNIHTGKKLFEC 102


>BC042170-1|AAH42170.2|  645|Homo sapiens ZNF573 protein protein.
          Length = 645

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 328 YTGXSRHQNRHDGREIFDC 384
           Y   +RHQN H G+++F+C
Sbjct: 434 YRNLTRHQNIHTGKKLFEC 452


>BC015418-1|AAH15418.1|  436|Homo sapiens ZNF573 protein protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 328 YTGXSRHQNRHDGREIFDC 384
           Y   +RHQN H G+++F+C
Sbjct: 225 YRNLTRHQNIHTGKKLFEC 243


>AK074539-1|BAC11047.1|  577|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90058 fis, clone HEMBA1003120, moderately
           similar to ZINC FINGER PROTEIN 184. ).
          Length = 577

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 328 YTGXSRHQNRHDGREIFDC 384
           Y   +RHQN H G+++F+C
Sbjct: 366 YRNLTRHQNIHTGKKLFEC 384


>AK055483-1|BAB70929.1|  578|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30921 fis, clone FEBRA2006476, moderately
           similar to ZINC FINGER PROTEIN 184. ).
          Length = 578

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 328 YTGXSRHQNRHDGREIFDC 384
           Y   +RHQN H G+++F+C
Sbjct: 367 YRNLTRHQNIHTGKKLFEC 385


>D87454-1|BAA13395.1|  401|Homo sapiens KIAA0265 protein.
          Length = 401

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 96  SNSNDFHVCNLSSKRFIL 43
           SN ND HVCN+  KR+ L
Sbjct: 138 SNGNDVHVCNVKYKRWAL 155


>BC036464-1|AAH36464.1|  442|Homo sapiens KIAA0265 protein protein.
          Length = 442

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 96  SNSNDFHVCNLSSKRFIL 43
           SN ND HVCN+  KR+ L
Sbjct: 179 SNGNDVHVCNVKYKRWAL 196


>BC009977-1|AAH09977.2|  291|Homo sapiens KIAA0265 protein
          protein.
          Length = 291

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 96 SNSNDFHVCNLSSKRFIL 43
          SN ND HVCN+  KR+ L
Sbjct: 28 SNGNDVHVCNVKYKRWAL 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,080,949
Number of Sequences: 237096
Number of extensions: 796617
Number of successful extensions: 1756
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)