SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0018.Seq
         (399 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase p...    60   4e-09
AJ272267-1|CAB75961.1|  482|Homo sapiens choline dehydrogenase p...    60   4e-09
U62769-1|AAB66673.1| 1011|Homo sapiens oxytocinase splice varian...    31   1.9  
U62768-1|AAB66672.1| 1025|Homo sapiens oxytocinase splice varian...    31   1.9  
D50810-1|BAA09436.1|  944|Homo sapiens placental leucine aminope...    31   1.9  
AJ131025-1|CAB94753.1| 1006|Homo sapiens oxytocinase/insulin-res...    31   1.9  
AJ131023-1|CAB61646.1| 1025|Homo sapiens oxytocinase/insulin-res...    31   1.9  
AB208883-1|BAD92120.1|  627|Homo sapiens leucyl/cystinyl aminope...    31   1.9  
D50406-1|BAA34060.1|  971|Homo sapiens ST15 protein.                   30   2.5  
AL158830-3|CAD13384.2|  971|Homo sapiens reversion-inducing-cyst...    30   2.5  
AL138834-5|CAH70155.1|  971|Homo sapiens reversion-inducing-cyst...    30   2.5  

>BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase
           protein.
          Length = 594

 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
 Frame = -3

Query: 241 FHYSGTCAMG------SVVDSKMKVYGIDNLRVVDVSTMPFIVRANTLAAGIMMAEKISD 80
           +H S TC MG      +VVD + +V G++NLRVVD S MP +V  N  A  IM+AEK +D
Sbjct: 510 YHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPSMVSGNLNAPTIMIAEKAAD 569

Query: 79  DIKNEYSL*EKCLGAFK 29
            IK + +L +K +  +K
Sbjct: 570 IIKGQPALWDKDVPVYK 586


>AJ272267-1|CAB75961.1|  482|Homo sapiens choline dehydrogenase
           protein.
          Length = 482

 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
 Frame = -3

Query: 241 FHYSGTCAMG------SVVDSKMKVYGIDNLRVVDVSTMPFIVRANTLAAGIMMAEKISD 80
           +H S TC MG      +VVD + +V G++NLRVVD S MP +V  N  A  IM+AEK +D
Sbjct: 398 YHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPSMVSGNLNAPTIMIAEKAAD 457

Query: 79  DIKNEYSL*EKCLGAFK 29
            IK + +L +K +  +K
Sbjct: 458 IIKGQPALWDKDVPVYK 474


>U62769-1|AAB66673.1| 1011|Homo sapiens oxytocinase splice variant 2
           protein.
          Length = 1011

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +2

Query: 41  KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
           KT+LS+ +F   VV YL  H YAS   I SDD
Sbjct: 546 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 574


>U62768-1|AAB66672.1| 1025|Homo sapiens oxytocinase splice variant 1
           protein.
          Length = 1025

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +2

Query: 41  KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
           KT+LS+ +F   VV YL  H YAS   I SDD
Sbjct: 560 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 588


>D50810-1|BAA09436.1|  944|Homo sapiens placental leucine
           aminopeptidase protein.
          Length = 944

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +2

Query: 41  KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
           KT+LS+ +F   VV YL  H YAS   I SDD
Sbjct: 479 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 507


>AJ131025-1|CAB94753.1| 1006|Homo sapiens
           oxytocinase/insulin-responsive aminopeptidase, putative
           variant 2 protein.
          Length = 1006

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +2

Query: 41  KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
           KT+LS+ +F   VV YL  H YAS   I SDD
Sbjct: 541 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 569


>AJ131023-1|CAB61646.1| 1025|Homo sapiens
           oxytocinase/insulin-responsive aminopeptidase, variant 1
           protein.
          Length = 1025

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +2

Query: 41  KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
           KT+LS+ +F   VV YL  H YAS   I SDD
Sbjct: 560 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 588


>AB208883-1|BAD92120.1|  627|Homo sapiens leucyl/cystinyl
           aminopeptidase variant protein.
          Length = 627

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +2

Query: 41  KTFLSKGIFIFNVVTYLFRHHYASRQGIGSDD 136
           KT+LS+ +F   VV YL  H YAS   I SDD
Sbjct: 162 KTYLSEDVFQHAVVLYLHNHSYAS---IQSDD 190


>D50406-1|BAA34060.1|  971|Homo sapiens ST15 protein.
          Length = 971

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 336 EIADPGLEECGEMDVSSEDYWKCYIKSRPSTYSITPVHVP 217
           EI D  +E C    +  +  W+C+++S  S +    VH P
Sbjct: 241 EIVDGLIEGCKTQPLPQDPLWQCFLESSQSVHPGVTVHPP 280


>AL158830-3|CAD13384.2|  971|Homo sapiens
           reversion-inducing-cysteine-rich protein with kazal
           motifs protein.
          Length = 971

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 336 EIADPGLEECGEMDVSSEDYWKCYIKSRPSTYSITPVHVP 217
           EI D  +E C    +  +  W+C+++S  S +    VH P
Sbjct: 241 EIVDGLIEGCKTQPLPQDPLWQCFLESSQSVHPGVTVHPP 280


>AL138834-5|CAH70155.1|  971|Homo sapiens
           reversion-inducing-cysteine-rich protein with kazal
           motifs protein.
          Length = 971

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = -1

Query: 336 EIADPGLEECGEMDVSSEDYWKCYIKSRPSTYSITPVHVP 217
           EI D  +E C    +  +  W+C+++S  S +    VH P
Sbjct: 241 EIVDGLIEGCKTQPLPQDPLWQCFLESSQSVHPGVTVHPP 280


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,073,633
Number of Sequences: 237096
Number of extensions: 1466505
Number of successful extensions: 2809
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2809
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -