Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner10a02r
         (751 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063308-1|AAH63308.1|  961|Homo sapiens DDEF2 protein protein.        31   4.4  
AC079782-1|AAY14904.1|  328|Homo sapiens unknown protein.              31   5.8  
AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.             31   5.8  
BC126212-1|AAI26213.1|  547|Homo sapiens beta-carotene 15,15'-mo...    30   7.7  
BC126210-1|AAI26211.1|  547|Homo sapiens beta-carotene 15,15'-mo...    30   7.7  
AK001592-1|BAA91776.1|  547|Homo sapiens protein ( Homo sapiens ...    30   7.7  
AF294900-1|AAG15380.1|  547|Homo sapiens beta, beta-carotene 15,...    30   7.7  

>BC063308-1|AAH63308.1|  961|Homo sapiens DDEF2 protein protein.
          Length = 961

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = -3

Query: 581 KYDDNGIPLTLEDNWMKFFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLD 402
           K+  N +     D    F +   FT +LTA    +I+N N  + F  DS+   ++  +  
Sbjct: 81  KFGGNRVCRDDPDLGSAFLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKG 140

Query: 401 EGKVPFD 381
           + K PFD
Sbjct: 141 DLKKPFD 147


>AC079782-1|AAY14904.1|  328|Homo sapiens unknown protein.
          Length = 328

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -3

Query: 530 FFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFD 381
           F +   FT +LTA    +I+N N  + F  DS+   ++  +  + K PFD
Sbjct: 56  FLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFD 105


>AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein.
          Length = 1022

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = -3

Query: 530 FFELDWFTTKLTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFD 381
           F +   FT +LTA    +I+N N  + F  DS+   ++  +  + K PFD
Sbjct: 114 FLKFSVFTKELTALFKNLIQNMNNIISFPLDSLLKGDLKGVKGDLKKPFD 163


>BC126212-1|AAI26213.1|  547|Homo sapiens beta-carotene
           15,15'-monooxygenase 1 protein.
          Length = 547

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = -3

Query: 500 LTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMSEEFCYMPKRLML 339
           L  G + + +   ++VIFK   +P T + +   +GK P+  +E FC +P R +L
Sbjct: 182 LNMGTSIVEKGKTKYVIFK---IPAT-VPEGKKQGKSPWKHTEVFCSIPSRSLL 231


>BC126210-1|AAI26211.1|  547|Homo sapiens beta-carotene
           15,15'-monooxygenase 1 protein.
          Length = 547

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = -3

Query: 500 LTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMSEEFCYMPKRLML 339
           L  G + + +   ++VIFK   +P T + +   +GK P+  +E FC +P R +L
Sbjct: 182 LNMGTSIVEKGKTKYVIFK---IPAT-VPEGKKQGKSPWKHTEVFCSIPSRSLL 231


>AK001592-1|BAA91776.1|  547|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10730 fis, clone NT2RP3001307. ).
          Length = 547

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = -3

Query: 500 LTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMSEEFCYMPKRLML 339
           L  G + + +   ++VIFK   +P T + +   +GK P+  +E FC +P R +L
Sbjct: 182 LNMGTSIVEKGKTKYVIFK---IPAT-VPEGKKQGKSPWKHTEVFCSIPSRSLL 231


>AF294900-1|AAG15380.1|  547|Homo sapiens beta, beta-carotene
           15,15'- dioxygenase protein.
          Length = 547

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 17/54 (31%), Positives = 30/54 (55%)
 Frame = -3

Query: 500 LTAGQNKIIRNSNEFVIFKEDSVPMTEIMKMLDEGKVPFDMSEEFCYMPKRLML 339
           L  G + + +   ++VIFK   +P T + +   +GK P+  +E FC +P R +L
Sbjct: 182 LNMGTSIVEKGKTKYVIFK---IPAT-VPEGKKQGKSPWKHTEVFCSIPSRSLL 231


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,130,698
Number of Sequences: 237096
Number of extensions: 2455591
Number of successful extensions: 8616
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8616
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)