Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_A04
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064964-1|AAH64964.1|  297|Homo sapiens TatD DNase domain conta...   154   2e-37
AF212250-1|AAK14933.1|  297|Homo sapiens CDA11 protein.               154   2e-37
AY071865-1|AAL61823.1|  250|Homo sapiens hepatocarcinoma high ex...   106   8e-23
BC117485-1|AAI17486.1|  274|Homo sapiens TatD DNase domain conta...    35   0.29 
BC113638-1|AAI13639.1|  274|Homo sapiens TatD DNase domain conta...    35   0.29 
BC048115-1|AAH48115.1|  275|Homo sapiens TATDN3 protein protein.       35   0.29 

>BC064964-1|AAH64964.1|  297|Homo sapiens TatD DNase domain
           containing 1 protein.
          Length = 297

 Score =  154 bits (374), Expect = 2e-37
 Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = +2

Query: 281 KYIDIGANLTDDMYKGVYNGSRKHEPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS 460
           K+IDIG NLTD M++G+Y G +KH+ DL  V+ RA   G+ K ++TGG+L+DSK A+ L+
Sbjct: 5   KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLA 64

Query: 461 RTDSKLFTTVGCHPTRCSEF-LSNPDDYLQGLRDLISGNKDKVVAIGECGLXYERFHFCE 637
           +T+   F+TVGCHPTRC EF  +NPD YL+ L +L   NK KVVAIGECGL ++R  FC 
Sbjct: 65  QTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCP 124

Query: 638 KEVQL 652
           K+ QL
Sbjct: 125 KDTQL 129


>AF212250-1|AAK14933.1|  297|Homo sapiens CDA11 protein.
          Length = 297

 Score =  154 bits (374), Expect = 2e-37
 Identities = 69/125 (55%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
 Frame = +2

Query: 281 KYIDIGANLTDDMYKGVYNGSRKHEPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS 460
           K+IDIG NLTD M++G+Y G +KH+ DL  V+ RA   G+ K ++TGG+L+DSK A+ L+
Sbjct: 5   KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLA 64

Query: 461 RTDSKLFTTVGCHPTRCSEF-LSNPDDYLQGLRDLISGNKDKVVAIGECGLXYERFHFCE 637
           +T+   F+TVGCHPTRC EF  +NPD YL+ L +L   NK KVVAIGECGL ++R  FC 
Sbjct: 65  QTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCP 124

Query: 638 KEVQL 652
           K+ QL
Sbjct: 125 KDTQL 129


>AY071865-1|AAL61823.1|  250|Homo sapiens hepatocarcinoma high
           expression protein protein.
          Length = 250

 Score =  106 bits (254), Expect = 8e-23
 Identities = 47/82 (57%), Positives = 62/82 (75%), Gaps = 1/82 (1%)
 Frame = +2

Query: 410 IVTGGSLEDSKKAIELSRTDSKLFTTVGCHPTRCSEF-LSNPDDYLQGLRDLISGNKDKV 586
           ++TGG+L+DSK A+ L++T+   F+TVGCHPTRC EF  +NPD YL+ L +L   NK KV
Sbjct: 1   MITGGNLQDSKDALHLAQTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKV 60

Query: 587 VAIGECGLXYERFHFCEKEVQL 652
           VAIGECGL ++R  FC K+ QL
Sbjct: 61  VAIGECGLDFDRLQFCPKDTQL 82


>BC117485-1|AAI17486.1|  274|Homo sapiens TatD DNase domain
           containing 3 protein.
          Length = 274

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
 Frame = +2

Query: 359 DLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS-RTDSKLFTTVGCHPTRCSEFLSNPD 535
           DLD VLE+A  + +  ++       + +K ++LS R +  +   +G HP    + L   D
Sbjct: 23  DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPV---QGLPPED 79

Query: 536 DYLQGLRDL------ISGNKDKVVAIGECGLXY 616
                L+DL      I   KD+++AIGE GL +
Sbjct: 80  QRSVTLKDLDVALPIIENYKDRLLAIGEVGLDF 112


>BC113638-1|AAI13639.1|  274|Homo sapiens TatD DNase domain
           containing 3 protein.
          Length = 274

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
 Frame = +2

Query: 359 DLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS-RTDSKLFTTVGCHPTRCSEFLSNPD 535
           DLD VLE+A  + +  ++       + +K ++LS R +  +   +G HP    + L   D
Sbjct: 23  DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPV---QGLPPED 79

Query: 536 DYLQGLRDL------ISGNKDKVVAIGECGLXY 616
                L+DL      I   KD+++AIGE GL +
Sbjct: 80  QRSVTLKDLDVALPIIENYKDRLLAIGEVGLDF 112


>BC048115-1|AAH48115.1|  275|Homo sapiens TATDN3 protein protein.
          Length = 275

 Score = 34.7 bits (76), Expect = 0.29
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
 Frame = +2

Query: 359 DLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS-RTDSKLFTTVGCHPTRCSEFLSNPD 535
           DLD VLE+A  + +  ++       + +K ++LS R +  +   +G HP    + L   D
Sbjct: 24  DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPV---QGLPPED 80

Query: 536 DYLQGLRDL------ISGNKDKVVAIGECGLXY 616
                L+DL      I   KD+++AIGE GL +
Sbjct: 81  QRSVTLKDLDVALPIIENYKDRLLAIGEVGLDF 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,536,981
Number of Sequences: 237096
Number of extensions: 1534864
Number of successful extensions: 6593
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6587
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)