SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0022
         (715 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456375-1|CAG30261.1|  384|Homo sapiens Em:AP000355.2 protein.       113   6e-25
BC139843-1|AAI39844.2|  389|Homo sapiens UPB1 protein protein.        113   6e-25
BC131703-1|AAI31704.1|  384|Homo sapiens UPB1 protein protein.        113   6e-25
AF169559-1|AAF06739.1|  387|Homo sapiens beta-ureidopropionase p...   113   6e-25
AF163312-1|AAF06735.1|  384|Homo sapiens beta-ureidopropionase p...   113   6e-25
AB013885-1|BAA88634.1|  384|Homo sapiens beta-ureidopropionase p...   113   6e-25
BC051322-1|AAH51322.1|  810|Homo sapiens leucine rich repeat con...    30   9.5  
AY143166-1|AAN18279.1|  810|Homo sapiens leucine-rich repeat-con...    30   9.5  
AL672142-1|CAI10839.1|  810|Homo sapiens leucine rich repeat con...    30   9.5  
AB037858-1|BAA92675.1|  811|Homo sapiens KIAA1437 protein protein.     30   9.5  

>CR456375-1|CAG30261.1|  384|Homo sapiens Em:AP000355.2 protein.
          Length = 384

 Score =  113 bits (272), Expect = 6e-25
 Identities = 50/87 (57%), Positives = 62/87 (71%)
 Frame = +2

Query: 245 PENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVTGQEGVNIICFQELWNMPFAFC 424
           P  + VG+VQ+ I +P + PV EQ  A+  ++K I++V    GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 425 TREKQPWCEFXESAEDGPTTTLLRELA 505
           TREK PW EF ESAEDGPTT   ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score = 80.6 bits (190), Expect = 5e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = +1

Query: 517 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIXRVGXFNES 663
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHI RVG FNES
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNES 208


>BC139843-1|AAI39844.2|  389|Homo sapiens UPB1 protein protein.
          Length = 389

 Score =  113 bits (272), Expect = 6e-25
 Identities = 50/87 (57%), Positives = 62/87 (71%)
 Frame = +2

Query: 245 PENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVTGQEGVNIICFQELWNMPFAFC 424
           P  + VG+VQ+ I +P + PV EQ  A+  ++K I++V    GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 425 TREKQPWCEFXESAEDGPTTTLLRELA 505
           TREK PW EF ESAEDGPTT   ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score = 80.6 bits (190), Expect = 5e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = +1

Query: 517 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIXRVGXFNES 663
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHI RVG FNES
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNES 208


>BC131703-1|AAI31704.1|  384|Homo sapiens UPB1 protein protein.
          Length = 384

 Score =  113 bits (272), Expect = 6e-25
 Identities = 50/87 (57%), Positives = 62/87 (71%)
 Frame = +2

Query: 245 PENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVTGQEGVNIICFQELWNMPFAFC 424
           P  + VG+VQ+ I +P + PV EQ  A+  ++K I++V    GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 425 TREKQPWCEFXESAEDGPTTTLLRELA 505
           TREK PW EF ESAEDGPTT   ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score = 80.6 bits (190), Expect = 5e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = +1

Query: 517 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIXRVGXFNES 663
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHI RVG FNES
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNES 208


>AF169559-1|AAF06739.1|  387|Homo sapiens beta-ureidopropionase
           protein.
          Length = 387

 Score =  113 bits (272), Expect = 6e-25
 Identities = 50/87 (57%), Positives = 62/87 (71%)
 Frame = +2

Query: 245 PENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVTGQEGVNIICFQELWNMPFAFC 424
           P  + VG+VQ+ I +P + PV EQ  A+  ++K I++V    GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 425 TREKQPWCEFXESAEDGPTTTLLRELA 505
           TREK PW EF ESAEDGPTT   ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score = 80.6 bits (190), Expect = 5e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = +1

Query: 517 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIXRVGXFNES 663
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHI RVG FNES
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNES 208


>AF163312-1|AAF06735.1|  384|Homo sapiens beta-ureidopropionase
           protein.
          Length = 384

 Score =  113 bits (272), Expect = 6e-25
 Identities = 50/87 (57%), Positives = 62/87 (71%)
 Frame = +2

Query: 245 PENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVTGQEGVNIICFQELWNMPFAFC 424
           P  + VG+VQ+ I +P + PV EQ  A+  ++K I++V    GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 425 TREKQPWCEFXESAEDGPTTTLLRELA 505
           TREK PW EF ESAEDGPTT   ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score = 80.6 bits (190), Expect = 5e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = +1

Query: 517 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIXRVGXFNES 663
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHI RVG FNES
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNES 208


>AB013885-1|BAA88634.1|  384|Homo sapiens beta-ureidopropionase
           protein.
          Length = 384

 Score =  113 bits (272), Expect = 6e-25
 Identities = 50/87 (57%), Positives = 62/87 (71%)
 Frame = +2

Query: 245 PENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVTGQEGVNIICFQELWNMPFAFC 424
           P  + VG+VQ+ I +P + PV EQ  A+  ++K I++V    GVNIICFQE W MPFAFC
Sbjct: 69  PRIVHVGLVQNRIPLPANAPVAEQVSALHRRIKAIVEVAAMCGVNIICFQEAWTMPFAFC 128

Query: 425 TREKQPWCEFXESAEDGPTTTLLRELA 505
           TREK PW EF ESAEDGPTT   ++LA
Sbjct: 129 TREKLPWTEFAESAEDGPTTRFCQKLA 155



 Score = 80.6 bits (190), Expect = 5e-15
 Identities = 36/49 (73%), Positives = 42/49 (85%)
 Frame = +1

Query: 517 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIXRVGXFNES 663
           MV+VS ILERD +H D+LWNTAVVIS++G V+GK RKNHI RVG FNES
Sbjct: 160 MVVVSPILERDSEHGDVLWNTAVVISNSGAVLGKTRKNHIPRVGDFNES 208


>BC051322-1|AAH51322.1|  810|Homo sapiens leucine rich repeat
           containing 8 family, member A protein.
          Length = 810

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 242 TPENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKK 346
           T   ++ GIV  S     D+   EQ KA+F KVKK
Sbjct: 215 TKSRIEQGIVDRSETGVLDKKEGEQAKALFEKVKK 249


>AY143166-1|AAN18279.1|  810|Homo sapiens leucine-rich
           repeat-containing 8 protein.
          Length = 810

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 242 TPENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKK 346
           T   ++ GIV  S     D+   EQ KA+F KVKK
Sbjct: 215 TKSRIEQGIVDRSETGVLDKKEGEQAKALFEKVKK 249


>AL672142-1|CAI10839.1|  810|Homo sapiens leucine rich repeat
           containing 8 family, member A protein.
          Length = 810

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 242 TPENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKK 346
           T   ++ GIV  S     D+   EQ KA+F KVKK
Sbjct: 215 TKSRIEQGIVDRSETGVLDKKEGEQAKALFEKVKK 249


>AB037858-1|BAA92675.1|  811|Homo sapiens KIAA1437 protein protein.
          Length = 811

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 242 TPENLKVGIVQHSIAVPTDRPVNEQKKAIFNKVKK 346
           T   ++ GIV  S     D+   EQ KA+F KVKK
Sbjct: 216 TKSRIEQGIVDRSETGVLDKKEGEQAKALFEKVKK 250


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,315,063
Number of Sequences: 237096
Number of extensions: 1973796
Number of successful extensions: 8363
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 8115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8363
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -