Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0019
         (854 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028915-1|AAH28915.1|  474|Homo sapiens Cas-Br-M (murine) ecotr...    33   1.0  
AF117646-1|AAD34341.1|  474|Homo sapiens long CBL-3 protein prot...    33   1.0  
AB028645-1|BAA86298.1|  474|Homo sapiens Cbl-c protein.                33   1.0  

>BC028915-1|AAH28915.1|  474|Homo sapiens Cas-Br-M (murine)
           ecotropic retroviral transforming sequence c protein.
          Length = 474

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = -1

Query: 614 WDIVEISWPAFSLFLFDALS*CXXXVFQSVQEIIEVSFDSP*SLLTRLSCRKSAPWAIFF 435
           W ++ ++ P +  FL           +  VQE ++   D P S + R SC +   WAI +
Sbjct: 228 WQLLAVNHPGYMAFL----------TYDEVQERLQACRDKPGSYIFRPSCTRLGQWAIGY 277

Query: 434 LSPDRMISAVI 402
           +S D  I   I
Sbjct: 278 VSSDGSILQTI 288


>AF117646-1|AAD34341.1|  474|Homo sapiens long CBL-3 protein
           protein.
          Length = 474

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = -1

Query: 614 WDIVEISWPAFSLFLFDALS*CXXXVFQSVQEIIEVSFDSP*SLLTRLSCRKSAPWAIFF 435
           W ++ ++ P +  FL           +  VQE ++   D P S + R SC +   WAI +
Sbjct: 228 WQLLAVNHPGYMAFL----------TYDEVQERLQACRDKPGSYIFRPSCTRLGQWAIGY 277

Query: 434 LSPDRMISAVI 402
           +S D  I   I
Sbjct: 278 VSSDGSILQTI 288


>AB028645-1|BAA86298.1|  474|Homo sapiens Cbl-c protein.
          Length = 474

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 20/71 (28%), Positives = 32/71 (45%)
 Frame = -1

Query: 614 WDIVEISWPAFSLFLFDALS*CXXXVFQSVQEIIEVSFDSP*SLLTRLSCRKSAPWAIFF 435
           W ++ ++ P +  FL           +  VQE ++   D P S + R SC +   WAI +
Sbjct: 228 WQLLAVTHPGYMAFL----------TYDEVQERLQACRDKPGSYIFRPSCTRLGQWAIGY 277

Query: 434 LSPDRMISAVI 402
           +S D  I   I
Sbjct: 278 VSSDGSILQTI 288


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,823,470
Number of Sequences: 237096
Number of extensions: 2326551
Number of successful extensions: 7859
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7859
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)