Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20021
         (716 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08569-1|CAA69880.1| 1015|Homo sapiens Islet Cell Autoantigen Re...    32   2.4  
X62899-1|CAA44688.2|  591|Homo sapiens Islet Cell Antigen 512 pr...    32   2.4  
U81561-1|AAB68603.1|  998|Homo sapiens protein tyrosine phosphat...    32   2.4  
U66702-1|AAC50742.1| 1015|Homo sapiens phogrin protein.                32   2.4  
U65065-1|AAC51643.1|  986|Homo sapiens tyrosine phosphatase IA-2...    32   2.4  
L18983-1|AAA90974.1|  979|Homo sapiens tyrosine phosphatase prot...    32   2.4  
BT006975-1|AAP35621.1|  591|Homo sapiens protein tyrosine phosph...    32   2.4  
BC070053-1|AAH70053.1|  950|Homo sapiens PTPRN protein protein.        32   2.4  
BC034040-1|AAH34040.1|  986|Homo sapiens protein tyrosine phosph...    32   2.4  
BC007713-1|AAH07713.2|  811|Homo sapiens PTPRN protein protein.        32   2.4  
AF007555-1|AAB63600.1| 1015|Homo sapiens IAR/receptor-like prote...    32   2.4  
AC114803-2|AAY24038.1|  979|Homo sapiens unknown protein.              32   2.4  
AB002385-1|BAA20841.2| 1042|Homo sapiens KIAA0387 protein.             32   2.4  
BC015728-1|AAH15728.1|  393|Homo sapiens TTC23 protein protein.        30   7.2  
AK023230-1|BAB14480.1|  391|Homo sapiens protein ( Homo sapiens ...    30   7.2  
AJ001515-1|CAA04798.1| 4870|Homo sapiens ryanodine receptor 3 pr...    30   7.2  
AF411456-1|AAQ03215.1|  447|Homo sapiens proto-oncogene 8 protein.     30   7.2  
AB001025-1|BAA23795.1| 4866|Homo sapiens brain ryanodine recepto...    30   7.2  

>Y08569-1|CAA69880.1| 1015|Homo sapiens Islet Cell Autoantigen
           Releted protein.
          Length = 1015

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 871 YEVNLVSEHIWCEDFLVRSFYL 892


>X62899-1|CAA44688.2|  591|Homo sapiens Islet Cell Antigen 512
           protein.
          Length = 591

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 447 YEVNLVSEHIWCEDFLVRSFYL 468


>U81561-1|AAB68603.1|  998|Homo sapiens protein tyrosine phosphatase
           receptor pi protein.
          Length = 998

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 854 YEVNLVSEHIWCEDFLVRSFYL 875


>U66702-1|AAC50742.1| 1015|Homo sapiens phogrin protein.
          Length = 1015

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 871 YEVNLVSEHIWCEDFLVRSFYL 892


>U65065-1|AAC51643.1|  986|Homo sapiens tyrosine phosphatase
           IA-2beta protein.
          Length = 986

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 842 YEVNLVSEHIWCEDFLVRSFYL 863


>L18983-1|AAA90974.1|  979|Homo sapiens tyrosine phosphatase
           protein.
          Length = 979

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 835 YEVNLVSEHIWCEDFLVRSFYL 856


>BT006975-1|AAP35621.1|  591|Homo sapiens protein tyrosine
           phosphatase, receptor type, N protein.
          Length = 591

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 447 YEVNLVSEHIWCEDFLVRSFYL 468


>BC070053-1|AAH70053.1|  950|Homo sapiens PTPRN protein protein.
          Length = 950

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 806 YEVNLVSEHIWCEDFLVRSFYL 827


>BC034040-1|AAH34040.1|  986|Homo sapiens protein tyrosine
           phosphatase, receptor type, N polypeptide 2 protein.
          Length = 986

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 842 YEVNLVSEHIWCEDFLVRSFYL 863


>BC007713-1|AAH07713.2|  811|Homo sapiens PTPRN protein protein.
          Length = 811

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 667 YEVNLVSEHIWCEDFLVRSFYL 688


>AF007555-1|AAB63600.1| 1015|Homo sapiens IAR/receptor-like
           protein-tyrosine phosphatase precursor protein.
          Length = 1015

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 871 YEVNLVSEHIWCEDFLVRSFYL 892


>AC114803-2|AAY24038.1|  979|Homo sapiens unknown protein.
          Length = 979

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 835 YEVNLVSEHIWCEDFLVRSFYL 856


>AB002385-1|BAA20841.2| 1042|Homo sapiens KIAA0387 protein.
          Length = 1042

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 10/22 (45%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           Y++NLV++H+W  ++L R FY+
Sbjct: 898 YEVNLVSEHIWCEDFLVRSFYL 919


>BC015728-1|AAH15728.1|  393|Homo sapiens TTC23 protein protein.
          Length = 393

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +1

Query: 190 PREPVHLL*RRAKYFYNKYQYTR*L*DLVYCLQL 291
           PRE +HL   +AK + N ++Y + + +LV C+ L
Sbjct: 41  PREKLHLCEEKAKSYSNSHEYKQAVHELVRCVAL 74


>AK023230-1|BAB14480.1|  391|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13168 fis, clone NT2RP3003795. ).
          Length = 391

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +1

Query: 190 PREPVHLL*RRAKYFYNKYQYTR*L*DLVYCLQL 291
           PRE +HL   +AK + N ++Y + + +LV C+ L
Sbjct: 41  PREKLHLCEEKAKSYSNSHEYKQAVHELVRCVAL 74


>AJ001515-1|CAA04798.1| 4870|Homo sapiens ryanodine receptor 3
            protein.
          Length = 4870

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = -2

Query: 451  IILYIKLA*RYF*IQIFNRNR*EHDMQPRQRCDENIN*STYKCLCYITIRAQCAIVDNIR 272
            + LY  +A  +F  + +N++  E D +P  +CD+ +  + Y    Y+ +RA   I D I 
Sbjct: 4681 VYLYTVVAFNFF-RKFYNKS--EDDDEPDMKCDDMM--TCYLFHMYVGVRAGGGIGDEIE 4735

Query: 271  DPKATLY 251
            DP    Y
Sbjct: 4736 DPAGDPY 4742


>AF411456-1|AAQ03215.1|  447|Homo sapiens proto-oncogene 8 protein.
          Length = 447

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = +1

Query: 190 PREPVHLL*RRAKYFYNKYQYTR*L*DLVYCLQL 291
           PRE +HL   +AK + N ++Y + + +LV C+ L
Sbjct: 41  PREKLHLCEEKAKSYSNSHEYKQAVHELVRCVAL 74


>AB001025-1|BAA23795.1| 4866|Homo sapiens brain ryanodine receptor
            protein.
          Length = 4866

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = -2

Query: 451  IILYIKLA*RYF*IQIFNRNR*EHDMQPRQRCDENIN*STYKCLCYITIRAQCAIVDNIR 272
            + LY  +A  +F  + +N++  E D +P  +CD+ +  + Y    Y+ +RA   I D I 
Sbjct: 4677 VYLYTVVAFNFF-RKFYNKS--EDDDEPDMKCDDMM--TCYLFHMYVGVRAGGGIGDEIE 4731

Query: 271  DPKATLY 251
            DP    Y
Sbjct: 4732 DPAGDPY 4738


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,178,551
Number of Sequences: 237096
Number of extensions: 2300689
Number of successful extensions: 3618
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3618
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)