SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20010
         (420 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

J04031-1|AAA59574.1|  935|Homo sapiens MTHFD protein.                  90   2e-18
BC050420-1|AAH50420.1|  935|Homo sapiens methylenetetrahydrofola...    90   2e-18
BC009806-1|AAH09806.1|  935|Homo sapiens methylenetetrahydrofola...    90   2e-18
X16396-1|CAA34431.1|  344|Homo sapiens protein ( Human mRNA for ...    54   1e-07
BC017054-1|AAH17054.2|  350|Homo sapiens methylenetetrahydrofola...    54   1e-07
BC015062-1|AAH15062.1|  248|Homo sapiens methylenetetrahydrofola...    54   1e-07
BC001548-1|AAH01548.1|  344|Homo sapiens methylene tetrahydrofol...    54   1e-07
AK223041-1|BAD96761.1|  344|Homo sapiens methylene tetrahydrofol...    54   1e-07
AK222826-1|BAD96546.1|  344|Homo sapiens methylene tetrahydrofol...    54   1e-07
AC073263-5|AAX93061.1|  344|Homo sapiens unknown protein.              54   1e-07
BC032771-1|AAH32771.1|  146|Homo sapiens MTHFD2L protein protein.      42   8e-04
BC037529-1|AAH37529.2|  106|Homo sapiens MTHFD2L protein protein.      42   0.001
BC110319-1|AAI10320.1|  900|Homo sapiens MTHFD1L protein protein.      39   0.006
AY374131-1|AAQ82697.1|  275|Homo sapiens truncated C1-tetrahydro...    39   0.006
AY374130-1|AAQ82696.1|  978|Homo sapiens C1-tetrahydrofolate syn...    39   0.006
AL133260-2|CAI95678.1|  978|Homo sapiens methylenetetrahydrofola...    39   0.006
AL117452-1|CAB55934.1|  917|Homo sapiens hypothetical protein pr...    39   0.006
AL049694-4|CAI95775.1|  331|Homo sapiens methylenetetrahydrofola...    39   0.006
AL049694-3|CAI95774.1|  978|Homo sapiens methylenetetrahydrofola...    39   0.006
AL035086-8|CAI42795.1|  331|Homo sapiens methylenetetrahydrofola...    39   0.006
AL035086-7|CAI42794.1|  978|Homo sapiens methylenetetrahydrofola...    39   0.006
AL035086-6|CAI42793.1|  114|Homo sapiens methylenetetrahydrofola...    39   0.006
AB127387-1|BAD93193.1|  978|Homo sapiens mitochondrial C1-tetrah...    39   0.006
BC112084-1|AAI12085.1|  823|Homo sapiens protocadherin gamma sub...    29   8.4  
BC112082-1|AAI12083.1|  823|Homo sapiens protocadherin gamma sub...    29   8.4  
AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domai...    29   8.4  
AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domai...    29   8.4  
AL353678-2|CAH71515.1|  784|Homo sapiens zinc finger, CCHC domai...    29   8.4  
AL353678-1|CAH71514.1|  395|Homo sapiens zinc finger, CCHC domai...    29   8.4  
AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domai...    29   8.4  
AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domai...    29   8.4  
AL137849-2|CAI14919.1|  784|Homo sapiens zinc finger, CCHC domai...    29   8.4  
AL137849-1|CAI14918.1|  395|Homo sapiens zinc finger, CCHC domai...    29   8.4  
AK130819-1|BAC85438.1|  328|Homo sapiens protein ( Homo sapiens ...    29   8.4  
AK055948-1|BAB71052.1|  671|Homo sapiens protein ( Homo sapiens ...    29   8.4  
AK023471-1|BAB14584.1|  395|Homo sapiens protein ( Homo sapiens ...    29   8.4  
AF152507-1|AAD43768.1|  823|Homo sapiens protocadherin gamma A1 ...    29   8.4  
AF152318-1|AAD43712.1|  931|Homo sapiens protocadherin gamma A1 ...    29   8.4  
AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein.     29   8.4  

>J04031-1|AAA59574.1|  935|Homo sapiens MTHFD protein.
          Length = 935

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 42/75 (56%), Positives = 58/75 (77%)
 Frame = +3

Query: 33  AQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKI 212
           A+I++G E++  I   L+ QVT+L+ +  GF PRLAI+QVG R+DSN+YI +KLKAAE+I
Sbjct: 4   AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 63

Query: 213 GIAAEHIRLPRDITK 257
           GI A HI+LPR  T+
Sbjct: 64  GIKATHIKLPRTTTE 78



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/52 (53%), Positives = 42/52 (80%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++  ITSLNE  +VHG +VQ+PLDS+++I+   V +A++P+KDVDGL +IN
Sbjct: 80  EVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSIN 131


>BC050420-1|AAH50420.1|  935|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1, methenyltetrahydro
           protein.
          Length = 935

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 42/75 (56%), Positives = 58/75 (77%)
 Frame = +3

Query: 33  AQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKI 212
           A+I++G E++  I   L+ QVT+L+ +  GF PRLAI+QVG R+DSN+YI +KLKAAE+I
Sbjct: 4   AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 63

Query: 213 GIAAEHIRLPRDITK 257
           GI A HI+LPR  T+
Sbjct: 64  GIKATHIKLPRTTTE 78



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/52 (53%), Positives = 42/52 (80%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++  ITSLNE  +VHG +VQ+PLDS+++I+   V +A++P+KDVDGL +IN
Sbjct: 80  EVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSIN 131


>BC009806-1|AAH09806.1|  935|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1, methenyltetrahydro
           protein.
          Length = 935

 Score = 90.2 bits (214), Expect = 2e-18
 Identities = 42/75 (56%), Positives = 58/75 (77%)
 Frame = +3

Query: 33  AQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKI 212
           A+I++G E++  I   L+ QVT+L+ +  GF PRLAI+QVG R+DSN+YI +KLKAAE+I
Sbjct: 4   AEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEI 63

Query: 213 GIAAEHIRLPRDITK 257
           GI A HI+LPR  T+
Sbjct: 64  GIKATHIKLPRTTTE 78



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/52 (53%), Positives = 42/52 (80%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++  ITSLNE  +VHG +VQ+PLDS+++I+   V +A++P+KDVDGL +IN
Sbjct: 80  EVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSIN 131


>X16396-1|CAA34431.1|  344|Homo sapiens protein ( Human mRNA for
           NAD-dependent methylene tetrahydrofolate  dehydrogenase
           cyclohydrolase (EC 1.5.1.15).  ).
          Length = 344

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           ELL  I  LN   +V G++VQ+PL  +H ID  R+ +AVSPDKDVDG + IN
Sbjct: 106 ELLNLINKLNNDDNVDGLLVQLPLP-EH-IDERRICNAVSPDKDVDGFHVIN 155



 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 24/75 (32%), Positives = 42/75 (56%)
 Frame = +3

Query: 33  AQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKI 212
           A +ISG ++A  I+ ++RQ+V    +      P L+++ VG    S+ Y+  K +AA  +
Sbjct: 31  AVVISGRKLAQQIKQEVRQEVEEWVAS-GNKRPHLSVILVGENPASHSYVLNKTRAAAVV 89

Query: 213 GIAAEHIRLPRDITK 257
           GI +E I  P  I++
Sbjct: 90  GINSETIMKPASISE 104


>BC017054-1|AAH17054.2|  350|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 2, methenyltetrahydro
           protein.
          Length = 350

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           ELL  I  LN   +V G++VQ+PL  +H ID  R+ +AVSPDKDVDG + IN
Sbjct: 112 ELLNLINKLNNDDNVDGLLVQLPLP-EH-IDERRICNAVSPDKDVDGFHVIN 161



 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 24/75 (32%), Positives = 42/75 (56%)
 Frame = +3

Query: 33  AQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKI 212
           A +ISG ++A  I+ ++RQ+V    +      P L+++ VG    S+ Y+  K +AA  +
Sbjct: 37  AVVISGRKLAQQIKQEVRQEVEEWVAS-GNKRPHLSVILVGENPASHSYVLNKTRAAAVV 95

Query: 213 GIAAEHIRLPRDITK 257
           GI +E I  P  I++
Sbjct: 96  GINSETIMKPASISE 110


>BC015062-1|AAH15062.1|  248|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 2, methenyltetrahydro
           protein.
          Length = 248

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           ELL  I  LN   +V G++VQ+PL  +H ID  R+ +AVSPDKDVDG + IN
Sbjct: 10  ELLNLINKLNNDDNVDGLLVQLPLP-EH-IDERRICNAVSPDKDVDGFHVIN 59


>BC001548-1|AAH01548.1|  344|Homo sapiens methylene tetrahydrofolate
           dehydrogenase 2, precursor protein.
          Length = 344

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           ELL  I  LN   +V G++VQ+PL  +H ID  R+ +AVSPDKDVDG + IN
Sbjct: 106 ELLNLINKLNNDDNVDGLLVQLPLP-EH-IDERRICNAVSPDKDVDGFHVIN 155



 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 24/75 (32%), Positives = 42/75 (56%)
 Frame = +3

Query: 33  AQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKI 212
           A +ISG ++A  I+ ++RQ+V    +      P L+++ VG    S+ Y+  K +AA  +
Sbjct: 31  AVVISGRKLAQQIKQEVRQEVEEWVAS-GNKRPHLSVILVGENPASHSYVLNKTRAAAVV 89

Query: 213 GIAAEHIRLPRDITK 257
           GI +E I  P  I++
Sbjct: 90  GINSETIMKPASISE 104


>AK223041-1|BAD96761.1|  344|Homo sapiens methylene tetrahydrofolate
           dehydrogenase 2 precursor variant protein.
          Length = 344

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           ELL  I  LN   +V G++VQ+PL  +H ID  R+ +AVSPDKDVDG + IN
Sbjct: 106 ELLNLINKLNNDDNVDGLLVQLPLP-EH-IDERRICNAVSPDKDVDGFHVIN 155



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 24/75 (32%), Positives = 41/75 (54%)
 Frame = +3

Query: 33  AQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKI 212
           A +ISG ++A  I+ ++RQ+V    +      P L+++ VG    S+ Y+  K +AA   
Sbjct: 31  AVVISGRKLAQQIKQEVRQEVEEWVAS-GNKRPHLSVILVGENPASHSYVLNKTRAAAVA 89

Query: 213 GIAAEHIRLPRDITK 257
           GI +E I  P  I++
Sbjct: 90  GINSETIMKPASISE 104


>AK222826-1|BAD96546.1|  344|Homo sapiens methylene tetrahydrofolate
           dehydrogenase 2 precursor variant protein.
          Length = 344

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           ELL  I  LN   +V G++VQ+PL  +H ID  R+ +AVSPDKDVDG + IN
Sbjct: 106 ELLNLINKLNNDDNVDGLLVQLPLP-EH-IDERRICNAVSPDKDVDGFHVIN 155



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 23/75 (30%), Positives = 41/75 (54%)
 Frame = +3

Query: 33  AQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKI 212
           A +ISG ++A  I+ ++RQ+V    +      P L+++  G    S+ Y+  K +AA  +
Sbjct: 31  AVVISGRKLAQQIKQEVRQEVEEWVAS-GNKRPHLSVILAGENPASHSYVLNKTRAAAVV 89

Query: 213 GIAAEHIRLPRDITK 257
           GI +E I  P  I++
Sbjct: 90  GINSETIMKPASISE 104


>AC073263-5|AAX93061.1|  344|Homo sapiens unknown protein.
          Length = 344

 Score = 54.4 bits (125), Expect = 1e-07
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           ELL  I  LN   +V G++VQ+PL  +H ID  R+ +AVSPDKDVDG + IN
Sbjct: 106 ELLNLINKLNNDDNVDGLLVQLPLP-EH-IDERRICNAVSPDKDVDGFHVIN 155



 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 24/75 (32%), Positives = 42/75 (56%)
 Frame = +3

Query: 33  AQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKI 212
           A +ISG ++A  I+ ++RQ+V    +      P L+++ VG    S+ Y+  K +AA  +
Sbjct: 31  AVVISGRKLAQQIKQEVRQEVEEWVAS-GNKRPHLSVILVGENPASHSYVLNKTRAAAVV 89

Query: 213 GIAAEHIRLPRDITK 257
           GI +E I  P  I++
Sbjct: 90  GINSETIMKPASISE 104


>BC032771-1|AAH32771.1|  146|Homo sapiens MTHFD2L protein protein.
          Length = 146

 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +2

Query: 296 PSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           P V GI+VQ+PL  DH +D   + + ++P+KDVDG + IN
Sbjct: 3   PRVSGILVQLPLP-DH-VDERTICNGIAPEKDVDGFHIIN 40


>BC037529-1|AAH37529.2|  106|Homo sapiens MTHFD2L protein protein.
          Length = 106

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = +3

Query: 129 PRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRDITK 257
           P L+I+ VG    S+ Y+R K++AA  +GI +E I  P+D+++
Sbjct: 24  PHLSIILVGDNPASHTYVRNKIRAASAVGICSELILKPKDVSQ 66


>BC110319-1|AAI10320.1|  900|Homo sapiens MTHFD1L protein protein.
          Length = 900

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 61  EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 108



 Score = 33.5 bits (73), Expect = 0.29
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = +3

Query: 84  RQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRD 248
           ++ ++ L+ K   F+P LAI+Q G   D N+   +    AE+ G+   HI LP D
Sbjct: 5   KEVLSLLQEKNPAFKPVLAIIQAG---DDNLMQEINQNLAEEAGLNITHICLPPD 56


>AY374131-1|AAQ82697.1|  275|Homo sapiens truncated
           C1-tetrahydrofolate synthase protein.
          Length = 275

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 139 EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 186



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = +3

Query: 69  IENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRD 248
           I+N  ++ ++ L+ K   F+P LAI+Q G   D N+   +    AE+ G+   HI LP D
Sbjct: 79  IQNS-KEVLSLLQEKNPAFKPVLAIIQAG---DDNLMQEINQNLAEEAGLNITHICLPPD 134


>AY374130-1|AAQ82696.1|  978|Homo sapiens C1-tetrahydrofolate
           synthase protein.
          Length = 978

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 139 EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 186



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = +3

Query: 69  IENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRD 248
           I+N  ++ ++ L+ K   F+P LAI+Q G   D N+   +    AE+ G+   HI LP D
Sbjct: 79  IQNS-KEVLSLLQEKNPAFKPVLAIIQAG---DDNLMQEINQNLAEEAGLNITHICLPPD 134


>AL133260-2|CAI95678.1|  978|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1-like protein.
          Length = 978

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 139 EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 186



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = +3

Query: 69  IENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRD 248
           I+N  ++ ++ L+ K   F+P LAI+Q G   D N+   +    AE+ G+   HI LP D
Sbjct: 79  IQNS-KEVLSLLQEKNPAFKPVLAIIQAG---DDNLMQEINQNLAEEAGLNITHICLPPD 134


>AL117452-1|CAB55934.1|  917|Homo sapiens hypothetical protein
           protein.
          Length = 917

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 78  EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 125



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = +3

Query: 69  IENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRD 248
           I+N  ++ ++ L+ K   F+P LAI+Q G   D N+   +    AE+ G+   HI LP D
Sbjct: 18  IQNS-KEVLSLLQEKNPAFKPVLAIIQAG---DDNLMQEINQNLAEEAGLNITHICLPPD 73


>AL049694-4|CAI95775.1|  331|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1-like protein.
          Length = 331

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 98  EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 145



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = +3

Query: 69  IENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRD 248
           I+N  ++ ++ L+ K   F+P LAI+Q G   D N+   +    AE+ G+   HI LP D
Sbjct: 38  IQNS-KEVLSLLQEKNPAFKPVLAIIQAG---DDNLMQEINQNLAEEAGLNITHICLPPD 93


>AL049694-3|CAI95774.1|  978|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1-like protein.
          Length = 978

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 139 EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 186



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = +3

Query: 69  IENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRD 248
           I+N  ++ ++ L+ K   F+P LAI+Q G   D N+   +    AE+ G+   HI LP D
Sbjct: 79  IQNS-KEVLSLLQEKNPAFKPVLAIIQAG---DDNLMQEINQNLAEEAGLNITHICLPPD 134


>AL035086-8|CAI42795.1|  331|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1-like protein.
          Length = 331

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 98  EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 145



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = +3

Query: 69  IENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRD 248
           I+N  ++ ++ L+ K   F+P LAI+Q G   D N+   +    AE+ G+   HI LP D
Sbjct: 38  IQNS-KEVLSLLQEKNPAFKPVLAIIQAG---DDNLMQEINQNLAEEAGLNITHICLPPD 93


>AL035086-7|CAI42794.1|  978|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1-like protein.
          Length = 978

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 139 EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 186



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = +3

Query: 69  IENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRD 248
           I+N  ++ ++ L+ K   F+P LAI+Q G   D N+   +    AE+ G+   HI LP D
Sbjct: 79  IQNS-KEVLSLLQEKNPAFKPVLAIIQAG---DDNLMQEINQNLAEEAGLNITHICLPPD 134


>AL035086-6|CAI42793.1|  114|Homo sapiens methylenetetrahydrofolate
           dehydrogenase (NADP+ dependent) 1-like protein.
          Length = 114

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 29  EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 76


>AB127387-1|BAD93193.1|  978|Homo sapiens mitochondrial
           C1-tetrahydrofolate synthetase protein.
          Length = 978

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 18/52 (34%), Positives = 33/52 (63%)
 Frame = +2

Query: 260 ELLAKITSLNESPSVHGIIVQMPLDSDHAIDAHRVTDAVSPDKDVDGLNTIN 415
           E++ +I  +NE   VHG+ +Q+       + +++V +A+ P+KDVDG+  IN
Sbjct: 139 EIIDEILKINEDTRVHGLALQI----SENLFSNKVLNALKPEKDVDGVTDIN 186



 Score = 33.9 bits (74), Expect = 0.22
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = +3

Query: 69  IENDLRQQVTRLRSKWSGFEPRLAIVQVGGREDSNVYIRMKLKAAEKIGIAAEHIRLPRD 248
           I+N  ++ ++ L+ K   F+P LAI+Q G   D N+   +    AE+ G+   HI LP D
Sbjct: 79  IQNS-KEVLSLLQEKNPAFKPVLAIIQAG---DDNLMQEINQNLAEEAGLNITHICLPPD 134


>BC112084-1|AAI12085.1|  823|Homo sapiens protocadherin gamma
           subfamily A, 1 protein.
          Length = 823

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 167 VLAPAXLHDGKPGLEARPF*TQPRHLLTQVI 75
           +L PA   DG  G+E  P   +P +L+T+V+
Sbjct: 562 ILYPALPTDGSTGVELAPLSAEPGYLVTKVV 592


>BC112082-1|AAI12083.1|  823|Homo sapiens protocadherin gamma
           subfamily A, 1, isoform 2 precursor protein.
          Length = 823

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 167 VLAPAXLHDGKPGLEARPF*TQPRHLLTQVI 75
           +L PA   DG  G+E  P   +P +L+T+V+
Sbjct: 562 ILYPALPTDGSTGVELAPLSAEPGYLVTKVV 592


>AL353678-6|CAH71518.1| 1495|Homo sapiens zinc finger, CCHC domain
            containing 6 protein.
          Length = 1495

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3    TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
            T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 1100 TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 1144


>AL353678-5|CAH71519.1| 1259|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3   TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
           T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 864 TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 908


>AL353678-2|CAH71515.1|  784|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 784

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3   TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
           T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 389 TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 433


>AL353678-1|CAH71514.1|  395|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3   TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
           T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 38  TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 82


>AL137849-4|CAI14920.1| 1495|Homo sapiens zinc finger, CCHC domain
            containing 6 protein.
          Length = 1495

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3    TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
            T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 1100 TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 1144


>AL137849-3|CAI14921.1| 1259|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 1259

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3   TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
           T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 864 TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 908


>AL137849-2|CAI14919.1|  784|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 784

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3   TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
           T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 389 TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 433


>AL137849-1|CAI14918.1|  395|Homo sapiens zinc finger, CCHC domain
           containing 6 protein.
          Length = 395

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3   TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
           T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 38  TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 82


>AK130819-1|BAC85438.1|  328|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27309 fis, clone TMS06203. ).
          Length = 328

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
 Frame = -2

Query: 185 PDVDVGVLAPAXLHDGKPGLEARPF*TQPRHLLTQVIFYRSCNFNPRYNLCHL--SPENC 12
           P  ++    P   H G PG E     TQP HL  +    R+C   P    C L  +PE  
Sbjct: 95  PSEELASWEPLVCHTG-PGAEGHSRSTQPMHLSGEASTARTCPQEPLRGGCGLLRAPERF 153

Query: 11  LV 6
           L+
Sbjct: 154 LL 155


>AK055948-1|BAB71052.1|  671|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31386 fis, clone NT2NE1000014, weakly similar to
           Schizosaccharomyces pombe caffeine-induced death protein
           1 ).
          Length = 671

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3   TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
           T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 389 TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 433


>AK023471-1|BAB14584.1|  395|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13409 fis, clone PLACE1001716. ).
          Length = 395

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3   TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
           T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 38  TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 82


>AF152507-1|AAD43768.1|  823|Homo sapiens protocadherin gamma A1
           short form protein protein.
          Length = 823

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 167 VLAPAXLHDGKPGLEARPF*TQPRHLLTQVI 75
           +L PA   DG  G+E  P   +P +L+T+V+
Sbjct: 562 ILYPALPTDGSTGVELAPLSAEPGYLVTKVV 592


>AF152318-1|AAD43712.1|  931|Homo sapiens protocadherin gamma A1
           protein.
          Length = 931

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 167 VLAPAXLHDGKPGLEARPF*TQPRHLLTQVI 75
           +L PA   DG  G+E  P   +P +L+T+V+
Sbjct: 562 ILYPALPTDGSTGVELAPLSAEPGYLVTKVV 592


>AB051498-1|BAB21802.1| 1090|Homo sapiens KIAA1711 protein protein.
          Length = 1090

 Score = 28.7 bits (61), Expect = 8.4
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +3

Query: 3   TNETVLWAKMAQIISGIEVAGSIENDLRQQVTRLRSKWSGFEPRL 137
           T   V   K   + SG+EV  S+ N L    TRL S +S  +PR+
Sbjct: 695 TTAKVPIVKFFHLRSGLEVDISLYNTLALHNTRLLSAYSAIDPRV 739


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,968,686
Number of Sequences: 237096
Number of extensions: 919160
Number of successful extensions: 1717
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1698
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -