Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0043
         (712 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated pr...    33   0.76 
BC122869-1|AAI22870.1|  470|Homo sapiens G protein-coupled recep...    31   3.1  
BC119779-1|AAI19780.1|  470|Homo sapiens G protein-coupled recep...    31   3.1  
AY569571-1|AAS76893.1|  470|Homo sapiens G protein-coupled recep...    31   3.1  
AB083620-1|BAB89333.1|  470|Homo sapiens putative G-protein coup...    31   3.1  
AB065853-1|BAC06071.1|  470|Homo sapiens seven transmembrane hel...    31   3.1  
BC100937-1|AAI00938.1|  301|Homo sapiens solute carrier family 2...    30   7.1  

>L06237-1|AAA18904.1| 2468|Homo sapiens microtubule-associated
           protein 1B protein.
          Length = 2468

 Score = 33.5 bits (73), Expect = 0.76
 Identities = 22/78 (28%), Positives = 37/78 (47%)
 Frame = +1

Query: 76  QKENLKKHRADCLSETKADEQLVNKLKTGDFKTENEPLKKYALCMLIKSQLMTKDGKFKK 255
           +KE  K+ + +   E K  ++ + KL   D K  + PL +      +K ++  K+   KK
Sbjct: 710 KKEVKKEEKKEVKKEEKEPKKEIKKLPK-DAKKSSTPLSEAKKPAALKPKVPKKEESVKK 768

Query: 256 DVALAKVPNAEDKLKVEK 309
           D   A  P  + K+KV K
Sbjct: 769 DSVAAGKPKEKGKIKVIK 786


>BC122869-1|AAI22870.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = -2

Query: 165 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHDALC 4
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A     +    A C
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATACRTCHRQQQPAAC 232


>BC119779-1|AAI19780.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = -2

Query: 165 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHDALC 4
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A     +    A C
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATACRTCHRQQQPAAC 232


>AY569571-1|AAS76893.1|  470|Homo sapiens G protein-coupled receptor
           152 protein.
          Length = 470

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = -2

Query: 165 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHDALC 4
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A     +    A C
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATACRTCHRQQQPAAC 232


>AB083620-1|BAB89333.1|  470|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 470

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = -2

Query: 165 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHDALC 4
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A     +    A C
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATACRTCHRQQQPAAC 232


>AB065853-1|BAC06071.1|  470|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 470

 Score = 31.5 bits (68), Expect = 3.1
 Identities = 20/54 (37%), Positives = 26/54 (48%)
 Frame = -2

Query: 165 VACLQFVHQLFISFRLGETVGSVFLQVLLLLICEGLSQDNADDEHDKSLHDALC 4
           V CL F     +S R+ E +G  FL  LLLL+C  L+Q  A     +    A C
Sbjct: 180 VICLDFWDSEELSLRMLEVLGG-FLPFLLLLVCHVLTQATACRTCHRQQQPAAC 232


>BC100937-1|AAI00938.1|  301|Homo sapiens solute carrier family 25
           (mitochondrial carrier; ornithine transporter) member
           protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 262 ALAKVPNAEDKLKVEKLIDACLANKGNSPHQTAWNYVKCYHEKD 393
           ALA  P    K +++ + +  ++ K    H T W+ VKC  +KD
Sbjct: 121 ALALCPTELVKCRLQTMYEMEMSGKIAKSHNTIWSVVKCILKKD 164


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,283,090
Number of Sequences: 237096
Number of extensions: 2023634
Number of successful extensions: 4352
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4352
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)